For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VRRNTWSEDACPIARTMSVLGQPWAPLIIREALLGRSRFSEFRDALGVASDVLSARLAELVRVGVLEVED YQVPGERRRSRYVLTEPGRGLVSVLAAMGQWGRVHLPREDSARYRFVEAATGEPVVAGFHRTDGRPVAAA EVALVDPHST
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_6829 | - | - | 100% (150) | transcriptional regulatory protein |
M. smegmatis MC2 155 | MSMEG_6580 | - | 1e-25 | 46.09% (128) | transcriptional regulator family protein |
M. smegmatis MC2 155 | MSMEG_3013 | - | 2e-21 | 43.75% (112) | putative transcriptional regulator family protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3122 | - | 5e-14 | 35.14% (111) | putative transcriptional regulatory protein |
M. gilvum PYR-GCK | Mflv_3781 | - | 5e-20 | 44.76% (105) | HxlR family transcriptional regulator |
M. tuberculosis H37Rv | Rv3095 | - | 5e-14 | 35.14% (111) | putative transcriptional regulatory protein |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_4063c | - | 4e-19 | 37.24% (145) | HxlR family transcriptional regulator |
M. marinum M | MMAR_1318 | - | 1e-20 | 38.46% (143) | transcriptional regulatory protein |
M. avium 104 | MAV_4183 | - | 6e-21 | 46.23% (106) | putative transcriptional regulator family protein |
M. thermoresistible (build 8) | TH_2405 | - | 3e-08 | 34.04% (94) | putative transcriptional regulator |
M. ulcerans Agy99 | MUL_2562 | - | 1e-20 | 44.95% (109) | transcriptional regulatory protein |
M. vanbaalenii PYR-1 | Mvan_2618 | - | 1e-22 | 44.92% (118) | HxlR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment Mb3122|M.bovis_AF2122/97 -------MAVSDLSHRFEGESVGRALELVGERWTLLILREAFFGVRRFGQ Rv3095|M.tuberculosis_H37Rv -------MAVSDLSHRFEGESVGRALELVGERWTLLILREAFFGVRRFGQ MAB_4063c|M.abscessus_ATCC_199 --------MVGRASHAESSCTLARPLGEIGDGWSLLIVRDAFDGLRRFGE Mflv_3781|M.gilvum_PYR-GCK MTVLQGPLADRSAWSAVGRCPIEKTMALVGTRSAMLLMREAYYGTTRFDD Mvan_2618|M.vanbaalenii_PYR-1 MPVLQGPLVDRDAWSAVGECPIEKTMAVAGQKSAMLIMREAYYGTTRFDD MMAR_1318|M.marinum_M --MLEGPLADRDGWSAVGECPIEKTMAVVGTKSAMLIMREAYYGTTRFDD MUL_2562|M.ulcerans_Agy99 --MLEGPLADRDGWSAVGECPIEKTMAVVGTKSAMLIMREAYYGTTRFDD MAV_4183|M.avium_104 MTLLQGPLADRDAWSAVGECAIEKTMAVVGTKSAMLIMREAYYGTTRFDD MSMEG_6829|M.smegmatis_MC2_155 --------MRRNTWSED-ACPIARTMSVLGQPWAPLIIREALLGRSRFSE TH_2405|M.thermoresistible__bu ----------MASRTYGQHCALAKSLDLVGDRWTLLIVRELLDGPRRYSD .: :.: * : *::*: * *:.: Mb3122|M.bovis_AF2122/97 LARNLG-IPRPTLSSRLRMLVEVGLFDRVPYSS--DPERHEYRLTEAGRD Rv3095|M.tuberculosis_H37Rv LARNLG-IPRPTLSSRLRMLVEVGLFDRVPYSS--DPERHEYRLTEAGRD MAB_4063c|M.abscessus_ATCC_199 FQKSLG-LAKNILASRLSTLVENGILEVVPAG-----ARHEYQLTEKGRG Mflv_3781|M.gilvum_PYR-GCK FSRRVG-ITKAATSARLAELTEAGLLTKRPYREPGQRVRDEYVLTEAGTE Mvan_2618|M.vanbaalenii_PYR-1 FAKRVG-ITKAATSARLSELVEAGLLTKQPYREPGQRARDEYVLTQAGVD MMAR_1318|M.marinum_M FARRVG-ITKAATSARLAELVSLKLLARRPYREPGQRSRDEYVLTEAGLD MUL_2562|M.ulcerans_Agy99 FARRVG-ITKAATSARLAELVSLKLLARRPYREPGQRSRDEYVLTEAGLD MAV_4183|M.avium_104 FARRVG-ITKAATSARLAELVELGLLKRRPYREPGQRSRDEYVLTQAGID MSMEG_6829|M.smegmatis_MC2_155 FRDALG-VASDVLSARLAELVRVGVLEVEDYQVPGERRRSRYVLTEPGRG TH_2405|M.thermoresistible__bu LLTALRPIATDMLATRLRHLEEHHLVRRRELPKP--ASGTVYELTADGAA : : :. ::** * :. * ** * Mb3122|M.bovis_AF2122/97 LFAAIVVLMQWGDEYLPR------------PEGPPIKLRHHTCGEHADPR Rv3095|M.tuberculosis_H37Rv LFAAIVVLMQWGDEYLPR------------PEGPPIKLRHHTCGEHADPR MAB_4063c|M.abscessus_ATCC_199 LFPVLVALRQWSGEFCFR------------PGEPRVSLIDRKTSSPVRRF Mflv_3781|M.gilvum_PYR-GCK FMPVVWAMFEWGRKHLD--------------DTS-LRLTHLGCGADAS-V Mvan_2618|M.vanbaalenii_PYR-1 FMPVVWAMFEWGRSHLP--------------NNGRLRLTHVPCGADAH-V MMAR_1318|M.marinum_M FMPVVFSLFQWGKRHLP--------------GGDRLQLTHLGCGAQAQ-V MUL_2562|M.ulcerans_Agy99 FMPVVFSLFQWGKRHLP--------------GGDRLQLTHLGCGAQAQ-V MAV_4183|M.avium_104 FMPVVWAMFEWGRRHLP--------------GRHRLQLTHLGCGAEVG-V MSMEG_6829|M.smegmatis_MC2_155 LVSVLAAMGQWGRVHLPR------------EDSARYRFVEAATGEPVV-A TH_2405|M.thermoresistible__bu LEAVVHAFIRWGRSLLETRRAGDVVRPHWLARAVRAHVRPDRTGPPLSVR : ..: : .*. . . Mb3122|M.bovis_AF2122/97 LICTHCGEEITARNVTPEPGPGFKAKLASS-------------------- Rv3095|M.tuberculosis_H37Rv LICTHCGEEITARNVTPEPGPGFKAKLASS-------------------- MAB_4063c|M.abscessus_ATCC_199 ELRAADGRLLAPEDTTVAQTAG---------------------------- Mflv_3781|M.gilvum_PYR-GCK DIVCDKGHSVPPDELGMRLVRRNRSADGG--------------------- Mvan_2618|M.vanbaalenii_PYR-1 EIVCDNGHSVPLEELGMRLVPQKRPESG---------------------- MMAR_1318|M.marinum_M EIRCAKGHLVPADELGMRLVRSP--------------------------- MUL_2562|M.ulcerans_Agy99 EIRCAKGHLMPADELGMRLVRSP--------------------------- MAV_4183|M.avium_104 EIRCAEGHLVPPDELGMRLAKKSG-------------------------- MSMEG_6829|M.smegmatis_MC2_155 GFHRTDGRPVAAAEVALVDPHST--------------------------- TH_2405|M.thermoresistible__bu LVTPEGAAAVRISADAVEDLDDDTAVDVTLTGAAEVLAAALHPDRAAELV . . : Mb3122|M.bovis_AF2122/97 --------------------------------- Rv3095|M.tuberculosis_H37Rv --------------------------------- MAB_4063c|M.abscessus_ATCC_199 --------------------------------- Mflv_3781|M.gilvum_PYR-GCK --------------------------------- Mvan_2618|M.vanbaalenii_PYR-1 --------------------------------- MMAR_1318|M.marinum_M --------------------------------- MUL_2562|M.ulcerans_Agy99 --------------------------------- MAV_4183|M.avium_104 --------------------------------- MSMEG_6829|M.smegmatis_MC2_155 --------------------------------- TH_2405|M.thermoresistible__bu AQGRLRVDGRADALRRLAEVVTAPAGRAVPDRS