For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. smegmatis MC2 155 MSMEG_6680 (-)

annotation: integral membrane protein
coordinates: 6732021 - 6732491
length: 156

TITAADRVLADRITTTGQMICRYGLVIVLAWIGVGKYVKMESRVLIEHSPLMSWLYDFLSVTAVAYCLGT
AEIVAAILIAARPFSARATVIGSAMAIVLFLGTLSFLFTTPGVIATHAGPIPVLSGMPGQFLLKDLVLIG
VSVWSLGEALHARTQ*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. smegmatis MC2 155MSMEG_6680--100% (156)integral membrane protein
M. smegmatis MC2 155MSMEG_4030-2e-3142.77% (159) hypothetical protein MSMEG_4030
M. smegmatis MC2 155MSMEG_4408-4e-2941.18% (153) integral membrane protein

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97-----
M. gilvum PYR-GCK-----
M. tuberculosis H37Rv-----
M. leprae Br4923-----
M. abscessus ATCC 19977MAB_3309c-4e-3246.90% (145) hypothetical protein MAB_3309c
M. marinum M-----
M. avium 104-----
M. thermoresistible (build 8)-----
M. ulcerans Agy99-----
M. vanbaalenii PYR-1Mvan_0783-5e-3647.06% (153) hypothetical protein Mvan_0783

CLUSTAL 2.0.9 multiple sequence alignment


MAB_3309c|M.abscessus_ATCC_199      MSTRTDALSVVCQNNAPVVRALAHIVARYGLAIVIGWIGIFKFCSYEALN
Mvan_0783|M.vanbaalenii_PYR-1       MTTLS-RHTVVDRLPVSRLESAGGALARYGLVVVIAWIGALKFTEYEANG
MSMEG_6680|M.smegmatis_MC2_155      -----MTITAADRVLADRITTTGQMICRYGLVIVLAWIGVGKYVKMESR-
                                            :.. :  .  : : .  :.****.:*:.***  *: . *:  

MAB_3309c|M.abscessus_ATCC_199      IQPLVANSPFMGWLYGVFSVQTFSSILGVVEIVTAVLLVVKPWYPRVSLA
Mvan_0783|M.vanbaalenii_PYR-1       IAPLVSESPFMSWAYDIFSVTTFSALLGVLELTAALLIAVKPWWPKLSII
MSMEG_6680|M.smegmatis_MC2_155      --VLIEHSPLMSWLYDFLSVTAVAYCLGTAEIVAAILIAARPFSARATVI
                                       *: .**:*.* *..:** :.:  **. *:.:*:*:..:*: .: :: 

MAB_3309c|M.abscessus_ATCC_199      GSALAIVLFVSTLSFLITTPGVGEASAGGFPFLS-MTGQFLIKDIVLLGV
Mvan_0783|M.vanbaalenii_PYR-1       GSVIAVGLFVATLSFLVTTPGVFEASAGGFPVLS-STGQFLVKDVALLGI
MSMEG_6680|M.smegmatis_MC2_155      GSAMAIVLFLGTLSFLFTTPGVIATHAGPIPVLSGMPGQFLLKDLVLIGV
                                    **.:*: **:.*****.*****  : ** :*.**  .****:**:.*:*:

MAB_3309c|M.abscessus_ATCC_199      SILTLADAMEAITHHAASTQART
Mvan_0783|M.vanbaalenii_PYR-1       SVWTLADAIRSSRP---------
MSMEG_6680|M.smegmatis_MC2_155      SVWSLGEALHARTQ---------
                                    *: :*.:*:.: