For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSASKVIERALPLSASDKIGAILGRYGLVIVIGWIGALKFADFEAHQIQPLVANSPFMGWLYNFLPVYTF SALLGVFEVTAAVLLAIKPIAPRLSIYGSLMAIVLFVFTVSFLFSTPGVSEPAGGGFPAISLTAEFLLKD IPLLGLSFWTLSDALRASQQRRG
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_4030 | - | - | 100% (163) | hypothetical protein MSMEG_4030 |
M. smegmatis MC2 155 | MSMEG_4408 | - | 3e-36 | 45.65% (138) | integral membrane protein |
M. smegmatis MC2 155 | MSMEG_6680 | - | 2e-31 | 42.77% (159) | integral membrane protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_3309c | - | 3e-45 | 62.50% (136) | hypothetical protein MAB_3309c |
M. marinum M | - | - | - | - | - |
M. avium 104 | - | - | - | - | - |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_0783 | - | 2e-48 | 57.23% (159) | hypothetical protein Mvan_0783 |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_4030|M.smegmatis_MC2_155 ---MSASKVIERALPLSASDKIGAILGRYGLVIVIGWIGALKFADFEAHQ Mvan_0783|M.vanbaalenii_PYR-1 MTTLSRHTVVDR-LPVSRLESAGGALARYGLVVVIAWIGALKFTEYEANG MAB_3309c|M.abscessus_ATCC_199 MSTRTDALSVVCQNNAPVVRALAHIVARYGLAIVIGWIGIFKFCSYEALN : : . . :.****.:**.*** :** .:** MSMEG_4030|M.smegmatis_MC2_155 IQPLVANSPFMGWLYNFLPVYTFSALLGVFEVTAAVLLAIKPIAPRLSIY Mvan_0783|M.vanbaalenii_PYR-1 IAPLVSESPFMSWAYDIFSVTTFSALLGVLELTAALLIAVKPWWPKLSII MAB_3309c|M.abscessus_ATCC_199 IQPLVANSPFMGWLYGVFSVQTFSSILGVVEIVTAVLLVVKPWYPRVSLA * ***::****.* *..:.* ***::***.*:.:*:*:.:** *::*: MSMEG_4030|M.smegmatis_MC2_155 GSLMAIVLFVFTVSFLFSTPGVSEPAGGGFPAISLTAEFLLKDIPLLGLS Mvan_0783|M.vanbaalenii_PYR-1 GSVIAVGLFVATLSFLVTTPGVFEASAGGFPVLSSTGQFLVKDVALLGIS MAB_3309c|M.abscessus_ATCC_199 GSALAIVLFVSTLSFLITTPGVGEASAGGFPFLSMTGQFLIKDIVLLGVS ** :*: *** *:***.:**** *.:.**** :* *.:**:**: ***:* MSMEG_4030|M.smegmatis_MC2_155 FWTLSDALR------ASQQRRG Mvan_0783|M.vanbaalenii_PYR-1 VWTLADAIR------SSRP--- MAB_3309c|M.abscessus_ATCC_199 ILTLADAMEAITHHAASTQART . **:**:. :*