For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. smegmatis MC2 155 MSMEG_4408 (-)

annotation: integral membrane protein
coordinates: 4496500 - 4497018
length: 172

SQVDDTKTDELRSPRLITAAPLVARYALVIVLVWFGAMKFTYYESHGISPLIANSPFLSWIFDLVSIRNF
GRLLGIVELITATLLALKPWYPKASVLGGVISSLFFLTTLSFMITTPDVGEASAGGWPVLSANGQFLMKD
IALLGLSLWLLADAVAAARAPGKSILGRSGA*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. smegmatis MC2 155MSMEG_4408--100% (172)integral membrane protein
M. smegmatis MC2 155MSMEG_4030-4e-3645.65% (138) hypothetical protein MSMEG_4030
M. smegmatis MC2 155MSMEG_6680-4e-2941.18% (153) integral membrane protein

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97-----
M. gilvum PYR-GCK-----
M. tuberculosis H37Rv-----
M. leprae Br4923-----
M. abscessus ATCC 19977MAB_3309c-1e-4351.27% (158) hypothetical protein MAB_3309c
M. marinum M-----
M. avium 104-----
M. thermoresistible (build 8)-----
M. ulcerans Agy99-----
M. vanbaalenii PYR-1Mvan_0783-1e-4855.19% (154) hypothetical protein Mvan_0783

CLUSTAL 2.0.9 multiple sequence alignment


MAB_3309c|M.abscessus_ATCC_199      MSTRTDALSVVCQNNAPVVRALAHIVARYGLAIVIGWIGIFKFCSYEALN
Mvan_0783|M.vanbaalenii_PYR-1       MTTLS-RHTVVDRLPVSRLESAGGALARYGLVVVIAWIGALKFTEYEANG
MSMEG_4408|M.smegmatis_MC2_155      MSQVD--DTKTDELRSPRLITAAPLVARYALVIVLVWFGAMKFTYYESHG
                                    *:      : . .   . : : .  :***.*.:*: *:* :**  **: .

MAB_3309c|M.abscessus_ATCC_199      IQPLVANSPFMGWLYGVFSVQTFSSILGVVEIVTAVLLVVKPWYPRVSLA
Mvan_0783|M.vanbaalenii_PYR-1       IAPLVSESPFMSWAYDIFSVTTFSALLGVLELTAALLIAVKPWWPKLSII
MSMEG_4408|M.smegmatis_MC2_155      ISPLIANSPFLSWIFDLVSIRNFGRLLGIVELITATLLALKPWYPKASVL
                                    * **:::***:.* :.:.*: .*. :**::*: :* *:.:***:*: *: 

MAB_3309c|M.abscessus_ATCC_199      GSALAIVLFVSTLSFLITTPGVGEASAGGFPFLSMTGQFLIKDIVLLGVS
Mvan_0783|M.vanbaalenii_PYR-1       GSVIAVGLFVATLSFLVTTPGVFEASAGGFPVLSSTGQFLVKDVALLGIS
MSMEG_4408|M.smegmatis_MC2_155      GGVISSLFFLTTLSFMITTPDVGEASAGGWPVLSANGQFLMKDIALLGLS
                                    *..::  :*::****::***.* ******:*.** .****:**:.***:*

MAB_3309c|M.abscessus_ATCC_199      ILTLADAMEAITHHAASTQART--
Mvan_0783|M.vanbaalenii_PYR-1       VWTLADAIRSSRP-----------
MSMEG_4408|M.smegmatis_MC2_155      LWLLADAVAAARAPGKSILGRSGA
                                    :  ****: :