For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. smegmatis MC2 155 MSMEG_6614 (-)

annotation: integral membrane protein
coordinates: 6666377 - 6667543
length: 388

FIVVLIVVLASMHFYVWTRLAKNTTTPGRSRRVATVLFLIPTALLFAGLIVPRVFDIREAAWLSWPGFVW
LALVFYLVLTLLVLEPVRLVLRRWVKRGGAQEAAPESTAVNRRMFLARGGAVAAGVASVALVGTGASIAL
GPPKMLQVPVRLGRIDPAFNGFRIAVVSDIHLGPMLGRSHTERIVRMINETEPDLVAIVGDLVDGTVSEL
GAAVEPLQDLAAREGSFFVTGNHEYFTDETGEWLRELERLGVAPLRNENTPIRRGRASFALAGVNDVAGE
RSSDPPDLDRALAGVAPSQATVLLAHQPVQVTEAAERGVDLQLSGHTHGGQLWPFHYVVSAVQPSLAGLS
TVGDTQLYVTRGAGFWGPPVRIGAPPDISVLTLRADQ*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. smegmatis MC2 155MSMEG_6614--100% (388)integral membrane protein
M. smegmatis MC2 155MSMEG_6202-3e-1127.24% (312) secreted protein

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb3708-3e-1229.24% (301) hypothetical protein Mb3708
M. gilvum PYR-GCKMflv_4868-1e-14866.16% (393) metallophosphoesterase
M. tuberculosis H37RvRv3683-3e-1229.24% (301) hypothetical protein Rv3683
M. leprae Br4923MLBr_02309-1e-0826.69% (296) hypothetical protein MLBr_02309
M. abscessus ATCC 19977MAB_0407c-4e-1126.89% (305) hypothetical protein MAB_0407c
M. marinum MMMAR_5172-8e-1329.24% (301) hypothetical protein MMAR_5172
M. avium 104MAV_0445-8e-1327.08% (325) secreted protein
M. thermoresistible (build 8)TH_1617-1e-13661.14% (386) integral membrane protein
M. ulcerans Agy99MUL_4258-5e-1329.24% (301) hypothetical protein MUL_4258
M. vanbaalenii PYR-1Mvan_5813-1e-5744.32% (273) metallophosphoesterase

CLUSTAL 2.0.9 multiple sequence alignment


Mb3708|M.bovis_AF2122/97            --------------------------------------------------
Rv3683|M.tuberculosis_H37Rv         --------------------------------------------------
MMAR_5172|M.marinum_M               --------------------------------------------------
MUL_4258|M.ulcerans_Agy99           --------------------------------------------------
MAV_0445|M.avium_104                --------------------------------------------------
MLBr_02309|M.leprae_Br4923          --------------------------------------------------
MAB_0407c|M.abscessus_ATCC_199      --------------------------------------------------
MSMEG_6614|M.smegmatis_MC2_155      -------------------------------MFIVVLIVVLASMHFYVWT
Mflv_4868|M.gilvum_PYR-GCK          MTDEVRVSCVTQHPARRTRVEELPKLLKGCPLFLVVLGSVLALMHFYVWK
TH_1617|M.thermoresistible__bu      -------------------------------MFILVLTAILALIHLYLWK
Mvan_5813|M.vanbaalenii_PYR-1       -------MSDNPAEAVEEAATPPRRSRGRWRRSAVVLAVMLLLFGVPWST
                                                                                      

Mb3708|M.bovis_AF2122/97            --------------------------MAAVLP-----------TLIRTGA
Rv3683|M.tuberculosis_H37Rv         --------------------------MAAVLP-----------TLIRTGA
MMAR_5172|M.marinum_M               -------------------MAYAQPPITKLLPGPLSGRHRAASVLLRGSA
MUL_4258|M.ulcerans_Agy99           -------------------MAYAQPPITKLLPGPLSGRHRAASVLLRGSA
MAV_0445|M.avium_104                -------------------MADAHVSIARRRSGPPRGRRRALPILLRTGA
MLBr_02309|M.leprae_Br4923          --------------------------------------------MIRTGA
MAB_0407c|M.abscessus_ATCC_199      --------------------------MSTSLN----------TVIKRAAA
MSMEG_6614|M.smegmatis_MC2_155      RLAKNTTTPGRSRRVATVLFLIPTALLFAGLIVPRVFDIREAAWLSWPGF
Mflv_4868|M.gilvum_PYR-GCK          RTVKDTSQ-GRARRWLSAALVVLMLMLVAALVVPRTVGVPESRWIAWPGY
TH_1617|M.thermoresistible__bu      RLVKDTTVAGRTRWLLTGVLGALFVVLIAALLLPRMIGVTATRWLAWPGY
Mvan_5813|M.vanbaalenii_PYR-1       LVVGGAAWPTAVAVAGTLVFVAAFAGLPVAMMLG--HGPARRDWAAVLGD
                                                                                    . 

Mb3708|M.bovis_AF2122/97            VALGSAIAGIGYAALVERNAFVLR--------------------------
Rv3683|M.tuberculosis_H37Rv         VALGSAIAGIGYAALVERNAFVLR--------------------------
MMAR_5172|M.marinum_M               VALGTTVAGIGYASLIERNAFVLR--------------------------
MUL_4258|M.ulcerans_Agy99           VALGTTVAGIGYASLIERNAFVLR--------------------------
MAV_0445|M.avium_104                AALGSTVAGLGYAAIIERNAFVLR--------------------------
MLBr_02309|M.leprae_Br4923          LVLSSAATGVGYASIVERNAFVLR--------------------------
MAB_0407c|M.abscessus_ATCC_199      YSAGSAALGIGYASIIERNAFTVR--------------------------
MSMEG_6614|M.smegmatis_MC2_155      VWLALVFYLVLTLLVLEPVRLVLRRWVKRG------GAQEAAPEST-AVN
Mflv_4868|M.gilvum_PYR-GCK          LWFGVLVYLFLVLLALEPVRLVLRRWTRPAPPPTPTDAETADPEMAPAVD
TH_1617|M.thermoresistible__bu      LWFAVAGYLLLILLVLEPLRVVLRRRPRRE----------PTPEHSPVID
Mvan_5813|M.vanbaalenii_PYR-1       ALLGAAWVLFVWSVLGQLFEVVLLAAGVADP-------------------
                                       .     .      :   ..:                           

Mb3708|M.bovis_AF2122/97            ------EVTMPVLTPGSTPLRVLHISDLHMLPNQHRKQAWLRELASWEPD
Rv3683|M.tuberculosis_H37Rv         ------EVTMPVLTPGSTPLRVLHISDLHMLPNQHRKQAWLRELASWEPD
MMAR_5172|M.marinum_M               ------EVTMPVLSPGSTPLRVLHLSDLHMLPNQRRKQAWLRELASWEPD
MUL_4258|M.ulcerans_Agy99           ------EVTMPVLSPGSTPLRVLHLSDLHMLPNQRRKQAWLRELASWEPD
MAV_0445|M.avium_104                ------EITMPVLSPGSTPLRVLHISDLHMTPGQRRKQAWLRELAGWEPD
MLBr_02309|M.leprae_Br4923          ------ELTIPILTPGSTPLRVLHISDIHMMPHQRRKQAWLRDLATWQPD
MAB_0407c|M.abscessus_ATCC_199      ------EATMDVLDPGASPLRVLHISDIHMRPGQRLKQAWLRELAQWQPD
MSMEG_6614|M.smegmatis_MC2_155      RRMFLARGGAVAAGVASVALVGTGASIALGPPKMLQVPVRLGRIDPAFNG
Mflv_4868|M.gilvum_PYR-GCK          RRVFLARTAAVTAGAAAVGLTGFGAARALGPPDVLRVPVRLSRLAPAFDG
TH_1617|M.thermoresistible__bu      RRLFLARGAAALAGVAAAGVVGAGASRALGDPDLLDVTVRLRGLHPAMDG
Mvan_5813|M.vanbaalenii_PYR-1       ---TRSRLVAAVVVTVAVGLLAWGYVEAMRVPRVKNLDVAIRRLGRGLDG
                                          .         :  :           *      . :  :     .

Mb3708|M.bovis_AF2122/97            LVVNTGDNLAHP---------KAVPAVVQTLSDLLSRPGVFVFGSNDYFG
Rv3683|M.tuberculosis_H37Rv         LVVNTGDNLAHP---------KAVPAVVQTLSDLLSRPGVFVFGSNDYFG
MMAR_5172|M.marinum_M               LVVNTGDNLAHP---------KAVPAVVQTLGDLLSRPGVFVFGSNDYFG
MUL_4258|M.ulcerans_Agy99           LVVNTGDNLAHP---------KAVPAVVQTLGDLLSRPGVFVFGSNDYFG
MAV_0445|M.avium_104                LVVNTGDNLAHP---------KAVPAVIQALGDLLSRPGVFVFGSNDYFG
MLBr_02309|M.leprae_Br4923          LVVNTGDNLAHP---------KAVPGVIQALGNLLSRPGVFVFGSNDYFG
MAB_0407c|M.abscessus_ATCC_199      LVINTGDNLAHP---------KAVSSVVQSLGDLLSIPGLFVFGSNDYFG
MSMEG_6614|M.smegmatis_MC2_155      FRIAVVSDIHLGPMLGRSHTERIVRMINETEPDLVAIVGDLVDGTVSELG
Mflv_4868|M.gilvum_PYR-GCK          FRIAVVSDIHLGPLLGRAHTERIVRMINEAQPDLVAVVGDLVDGTVEELG
TH_1617|M.thermoresistible__bu      FRVAMLSDLHLGPLLGRSFTERIVRLVNDTEPDLIVIVGDLVDGEVHELA
Mvan_5813|M.vanbaalenii_PYR-1       LRVAVITDTHYGPIDRARWSAGVVERVNELDADVVCHVGDIADGTADIRE
                                    : :    :               *  : :   :::   * :. *      

Mb3708|M.bovis_AF2122/97            PRLKNPMNYLTSP-DHRVRGAALPWQDLRAAFTER----GWLDLTHTRRE
Rv3683|M.tuberculosis_H37Rv         PRLKNPMNYLTSP-DHRVRGAALPWQDLRAAFTER----GWLDLTHTRRE
MMAR_5172|M.marinum_M               PRLKNPANYLINP-GHRVRGEPLPWQDLRAAFTER----GWLDLTHTRRE
MUL_4258|M.ulcerans_Agy99           PRLKNPANYLINP-GHRVRGEPLPWQDLRAAFTER----GWLDLTHTRRE
MAV_0445|M.avium_104                PHLKNPLNYVTNP-SHRVRGEPLPWQDLRAAFTER----GWLDLTHTRRE
MLBr_02309|M.leprae_Br4923          PHLKNPVNYLTNP-THRVRGKPLPWKDLRAAFTER----GWLDLTHTRRE
MAB_0407c|M.abscessus_ATCC_199      PRLKNPAKYLYKS-HERKHGEPLPWQDLRAAFTER----GWHDMTHTRRE
MSMEG_6614|M.smegmatis_MC2_155      AAVEPLQDLAAREGSFFVTGNHEYFTDETGEWLRELERLGVAPLRNENTP
Mflv_4868|M.gilvum_PYR-GCK          AAAEPLQDLVAPEGAFFVTGNHEYFVDDTPAWLRELERFGLDVLSNENTL
TH_1617|M.thermoresistible__bu      AATEPLHALRAAHGTFFATGNHEYYLTDTDAWIEQLDRLGVGTLRNAHTV
Mvan_5813|M.vanbaalenii_PYR-1       AQASPLARVRARSARVYVTGNHEYFS-EAQGWLDYMERIGWDVLHNRHVV
                                    .  .               *    :      :       *   : : .  

Mb3708|M.bovis_AF2122/97            FEVAGLHIAAAGVDDPHIDRD----RYDTIAGPASPAANLRLGLTHSPEP
Rv3683|M.tuberculosis_H37Rv         FEVAGLHIAAAGVDDPHIDRD----RYDTIAGPASPAANLRLGLTHSPEP
MMAR_5172|M.marinum_M               FEVAGLHIAAAGVDDPHINRD----RYDAIAGPASPAANLRLGLTHSPEP
MUL_4258|M.ulcerans_Agy99           FEVAGLHIAAAGVDDPHINRD----RYDAIAGPASPAANLRLGLTHSPEP
MAV_0445|M.avium_104                FEVAGLHVAAAGVDDPHIDRD----RYDTIAGPASPAANLRLGLTHSPEP
MLBr_02309|M.leprae_Br4923          FEVAGLHIAAAGVDDPHISRD----RYDTIAGPASPVANLRLGLTHSPEP
MAB_0407c|M.abscessus_ATCC_199      IEVGGVRIAAAGVDDPHLHRD----RYDTIAGMPNPLATLRLGLTHSPEP
MSMEG_6614|M.smegmatis_MC2_155      IRRGRASFALAGVNDVAGERS---SDPPDLDRALAGVAPSQATVLLAHQP
Mflv_4868|M.gilvum_PYR-GCK          LTRGGAGLHLAGVNDIAGESR---SDPPDFDRALAGAGARGPTVLLAHQP
TH_1617|M.thermoresistible__bu      IRRGPAAFTLAGVTDVAGARR---GDPPDFDRALSGTDPALPTVLLAHQP
Mvan_5813|M.vanbaalenii_PYR-1       VERGGDRMVVAGIDDATASGSGVSGHGADLDSALIGADRSLPVLLLAHQP
                                    .  .   .  **: *              :             :  : :*

Mb3708|M.bovis_AF2122/97            RVLDRFAADGYQLVLAGHTHGGQLCLPLYGALVTNCGLDRSRAKGASHWG
Rv3683|M.tuberculosis_H37Rv         RVLDRFAADGYQLVLAGHTHGGQLCLPLYGALVTNCGLDRSRAKGASHWG
MMAR_5172|M.marinum_M               RVLDRFAADGYQLVMAGHTHGGQLCLPFYGALVTNCGLDRTRAKGASQWG
MUL_4258|M.ulcerans_Agy99           RVLDRFAADGYQLVMAGHTHGGQLCLPFYGALVTNCGLDRTRAKGASQWG
MAV_0445|M.avium_104                RVLDRFAADGYQLVMAGHTHGGQVCLPFYGALVTNCGLDRSRAKGPSRWG
MLBr_02309|M.leprae_Br4923          RVLDRFAADCYQLVMAGHTHGGQLCLPFYGALVTNCGLDRSRAKGLSRWD
MAB_0407c|M.abscessus_ATCC_199      RVLDRFAEDGYQLVMAGHTHGGQLCLPLYGAIVTNCELDRSRVKGPSQWG
MSMEG_6614|M.smegmatis_MC2_155      VQVTEAAERGVDLQLSGHTHGGQLWP-----FHYVVSAVQPSLAGLSTVG
Mflv_4868|M.gilvum_PYR-GCK          IEVEKAADRGVDLQLSGHTHGGQMWP-----FHYAVELAQPTLAGLSRVG
TH_1617|M.thermoresistible__bu      DLITEAAARGVDLQLSGHTHGGQVWP-----FHLAVRAVQPTLAGLAAVG
Mvan_5813|M.vanbaalenii_PYR-1       KQVVHAVRGGVDLQISGHTHGGQIWP-----FNFLVRLEQPVVHGLSTHG
                                      : . .    :* ::*******:       :       :.   * :  .

Mb3708|M.bovis_AF2122/97            ANMRLHVSAGIGTSPFAPVRFCCRPEATLLTLIATPMGGRDSS---SNLG
Rv3683|M.tuberculosis_H37Rv         ANMRLHVSAGIGTSPFAPVRFCCRPEATLLTLIATPMGGRDSS---SNLG
MMAR_5172|M.marinum_M               ANMRLHVSAGIGTSPFAPVRFCCRPEATLLTLIAAPMGGRDSS---SNLD
MUL_4258|M.ulcerans_Agy99           ANMRLHVSAGIGTSPFAPVRFCCRPEATLLTLIAAPMGGRDSS---SNLD
MAV_0445|M.avium_104                AHMQLHVSAGMGTSPYAPVRFCCRPEATLLTLIATPMGDRDAV---SDLS
MLBr_02309|M.leprae_Br4923          ADMRLHVSAGIGTSPLAPMRFCCRPEATLLTLIATPMGSRVESPVRTGAV
MAB_0407c|M.abscessus_ATCC_199      SHMQLHVSAGIGTSPFAPMRFFCRPEATLLTLVPARTSGHGAD---AESG
MSMEG_6614|M.smegmatis_MC2_155      D-TQLYVTRGAGFWG-PPVRIGAPPDISVLTLRADQ--------------
Mflv_4868|M.gilvum_PYR-GCK          D-TQLYVTRGAGFWG-PPLRIGAPPDISVLTLRSGD--------------
TH_1617|M.thermoresistible__bu      D-TQLYVSRGAGFWG-PPARVGAPPDISVLTLRAAG--------------
Mvan_5813|M.vanbaalenii_PYR-1       DRTQLYTSRGTGFWG-PPFRVFAPSEITVLTLRRCSSDDDQAA-------
                                       :*:.: * *    .* *. . .: ::***                  

Mb3708|M.bovis_AF2122/97            RSQPTVSVR---------------
Rv3683|M.tuberculosis_H37Rv         RSQPTVSVR---------------
MMAR_5172|M.marinum_M               RSQPTMSIR---------------
MUL_4258|M.ulcerans_Agy99           RSQPTMSIR---------------
MAV_0445|M.avium_104                RSQPTASVR---------------
MLBr_02309|M.leprae_Br4923          RNQQLQCVERAHRDSGPRPPTQLD
MAB_0407c|M.abscessus_ATCC_199      DRSPSATVQ---------------
MSMEG_6614|M.smegmatis_MC2_155      ------------------------
Mflv_4868|M.gilvum_PYR-GCK          ------------------------
TH_1617|M.thermoresistible__bu      ------------------------
Mvan_5813|M.vanbaalenii_PYR-1       RHEPR-------------------