For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. smegmatis MC2 155 MSMEG_6561 (-)

annotation: nonspecific lipid-transfer protein
coordinates: 6615249 - 6616469
length: 406

RPRKGLQGEAAIVGYVELPPERLSTASPAPFTLEQWAQLSAAALDDAGLSAEQVDGIVTSHLGESEIFVP
STVAEYLGVRANFAELLDLGGASAAGMVWRAAAAIELGICDVVLCALPARYLTPMSDLKPKSLSDAVFFG
SSSNQFGSPQAEFDIPYGNLGQNGPYGQVAQRYAYEYGYDERAMAKIVVDQRVNANHTEGAIWKDKPLTI
EDVLASPIIADPLHMLEIVMPCVGGAAVVVASADVAAKAKNRPVWVKGFGEHVPFKTPTYAEDLLDTPMR
RAAETAFTMSGLGRDQMDMVSIYDCYTITVLLSLEDAGFCEKGKGMAFVSDHDLTFRGDFPLNTAGGQLG
FGQAGLAGGMHHVCDATRQIMERAGAAQVRNCHRAFVSGNGGILSEQTALILEGD*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. smegmatis MC2 155MSMEG_6561--100% (406)nonspecific lipid-transfer protein
M. smegmatis MC2 155MSMEG_5990-2e-3429.19% (394) lipid-transfer protein
M. smegmatis MC2 155MSMEG_4814-7e-2626.99% (389) hypothetical protein MSMEG_4814

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb3570cltp22e-2929.11% (371) lipid-transfer protein
M. gilvum PYR-GCKMflv_2377-0.086.53% (401) hypothetical protein Mflv_2377
M. tuberculosis H37RvRv3540cltp22e-2929.11% (371) lipid-transfer protein
M. leprae Br4923-----
M. abscessus ATCC 19977MAB_2051-1e-3830.17% (401) hypothetical protein MAB_2051
M. marinum MMMAR_5027ltp2_11e-2928.84% (371) acetyl-CoA acetyltransferase (PaaJ-like), Ltp2_1
M. avium 104MAV_5265-0.085.04% (401) nonspecific lipid-transfer protein
M. thermoresistible (build 8)TH_1527-1e-17574.56% (401) nonspecific lipid-transfer protein
M. ulcerans Agy99MUL_4101ltp2_11e-3029.11% (371) lipid-transfer protein
M. vanbaalenii PYR-1Mvan_4269-0.087.78% (401) hypothetical protein Mvan_4269

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_2377|M.gilvum_PYR-GCK          ----MGLRGEAAIVGYVELPPERLNKATPAPFTLEQWAELAAAALEDAGL
Mvan_4269|M.vanbaalenii_PYR-1       ----MGLRGEAAIVGYVELPPERLNKATPAPFTLEQWAELGAAALDDAGL
MSMEG_6561|M.smegmatis_MC2_155      MRPRKGLQGEAAIVGYVELPPERLSTASPAPFTLEQWAQLSAAALDDAGL
MAV_5265|M.avium_104                --MHMGLRGEAAIVGYVELPPERLSKASPAPFVLEQWAELGAAALQDAGL
TH_1527|M.thermoresistible__bu      ----MGLRGEAAIVGFTELPATRQPTG-PLEFNLEQWARLAAAALADAGL
Mb3570c|M.bovis_AF2122/97           -----MLSGQAAIVGIGATDFSKNSGR----SELRLAAEAVLDALADAGL
Rv3540c|M.tuberculosis_H37Rv        -----MLSGQAAIVGIGATDFSKNSGR----SELRLAAEAVLDALADAGL
MMAR_5027|M.marinum_M               -----MLSGKAAIVGIGATDFSKNSGR----SELRLAAEAVRDALDDAGL
MUL_4101|M.ulcerans_Agy99           -----MLSGKAAIVGIGATDFSKNSGR----SELRLAAEAVRDALDDAGL
MAB_2051|M.abscessus_ATCC_1997      -----MPHDQPAIIGAAEVAPGRNVPY----TSTELHVRAAVAALADAGV
                                            .:.**:*       :           .  ..    ** ***:

Mflv_2377|M.gilvum_PYR-GCK          SGEAPDGIVTT--HLNESEIFVPSTVAEYLGV-RAGFAEIVDLGGASAVG
Mvan_4269|M.vanbaalenii_PYR-1       SGELVDGIVTT--HLSESEIFVPSTVTEYLGV-RANFAEMVDLGGASAVG
MSMEG_6561|M.smegmatis_MC2_155      SAEQVDGIVTS--HLGESEIFVPSTVAEYLGV-RANFAELLDLGGASAAG
MAV_5265|M.avium_104                PGEVVNGIVAS--HLAESEIFVPSTIAEYLGV-GARFAEHVDLGGASAAA
TH_1527|M.thermoresistible__bu      TAADVDGIVTT--HLPESQLFAPSTIIEYLGI-TANFAELVDLGGASSAA
Mb3570c|M.bovis_AF2122/97           SPTDVDGLTTF--TMDTNTEIAVARAAGIG---ELTFFSKIHYGGGAACA
Rv3540c|M.tuberculosis_H37Rv        SPTDVDGLTTF--TMDTNTEIAVARAAGIG---ELTFFSKIHYGGGAACA
MMAR_5027|M.marinum_M               SPADVDGLTTF--TMDTNTEIAVARAAGIG---ELKFFSKIHYGGGAACA
MUL_4101|M.ulcerans_Agy99           SPADVDGLTTF--TMDTNTEIAVARAAGIG---ELKFFSKIHYGGGAACA
MAB_2051|M.abscessus_ATCC_1997      VPDEVDGLVCAGPMTNEGSIFLSEDLMDYLGLHNLKLQMTCQLGGGTHLA
                                         :*:.        .  :               :    . **.:  .

Mflv_2377|M.gilvum_PYR-GCK          MVWRAAAAIELGICDVVVCAIPARYITPVSEKKPKPLIDAVFFGASSNQY
Mvan_4269|M.vanbaalenii_PYR-1       MVWRAAAAIELGICDVVLCAIPARYLTPTSPKKPKPLVDAVFFGASSNQF
MSMEG_6561|M.smegmatis_MC2_155      MVWRAAAAIELGICDVVLCALPARYLTPMSDLKPKSLSDAVFFGSSSNQF
MAV_5265|M.avium_104                MVWRAAAAIELGICDAVLCALPARYITPSSKKKPRPMVDAMFFGSSSNQY
TH_1527|M.thermoresistible__bu      MVWRAAAAIELGLCSAVLCVVPAIPLTPTCEEKPVDFTEMLYFGASSNRY
Mb3570c|M.bovis_AF2122/97           TVQHAAMAVATGVADVVVAYR------AFNERSGMRFGQVQTRLTENADS
Rv3540c|M.tuberculosis_H37Rv        TVQHAAMAVATGVADVVVAYR------AFNERSGMRFGQVQTRLTENADS
MMAR_5027|M.marinum_M               TVQHAAMAVATGIADVVVAYR------AFNERSGMRFGQVQTRLTENADS
MUL_4101|M.ulcerans_Agy99           TVQHAAMAVATGIADVVVAYR------AFNERSDMRFGQVQTRLTENADS
MAB_2051|M.abscessus_ATCC_1997      MTRMASNVIARGEAETVLVVS-------------AGKFPPIRDGGRELMA
                                     .  *: .:  * ...*:                            .   

Mflv_2377|M.gilvum_PYR-GCK          GSPQAEFEIPYGNLGQNGPYGQVAQRYASVYGYDERAMAKIVVDQRVNAN
Mvan_4269|M.vanbaalenii_PYR-1       GSPQAEFEIPYGNLGQNGPYGQVAQRYASVYGYDERAMAKIVVDQRFNAN
MSMEG_6561|M.smegmatis_MC2_155      GSPQAEFDIPYGNLGQNGPYGQVAQRYAYEYGYDERAMAKIVVDQRVNAN
MAV_5265|M.avium_104                GSPQAEFEIPYGNLGQNGPYGQVAQRYAAVYGYDERAMAKIVVDQRVNAN
TH_1527|M.thermoresistible__bu      GSPQAEFEIPYGNLGQNGPYGQVATRYAATYGYDERAMAKISVDQRVNAN
Mb3570c|M.bovis_AF2122/97           TGVDNSFSYPHGLSTPAAQVAMIARRYMHLSGATSRDFGAVSVADRKHAA
Rv3540c|M.tuberculosis_H37Rv        TGVDNSFSYPHGLSTPAAQVAMIARRYMHLSGATSRDFGAVSVADRKHAA
MMAR_5027|M.marinum_M               TGVDNSFSYPHGLSTPAAQVAMIAKRYMHLSGASSRDFGAVSVADRKHAA
MUL_4101|M.ulcerans_Agy99           TGVDNSFSYPHGLSTPAAQVAMIAKRYMHLSGASSRDFGAVSVADRKHAA
MAB_2051|M.abscessus_ATCC_1997      LVCDHAFEMPYGPSVP-ALYGLIAQAWMHETGQGKADIAEVTASQDRWAA
                                       :  *. *:*     .  . :*  :    *  .  :. : . :   * 

Mflv_2377|M.gilvum_PYR-GCK          HTEGAIWK-DKPLTIEEVLASPVIADPLHMLEIVMPCVGGAAVVVASAEA
Mvan_4269|M.vanbaalenii_PYR-1       HTEGAVWK-DKPLTIEDVLASPVIADPLHMLEIVMPCLGGAAVVVAGAEV
MSMEG_6561|M.smegmatis_MC2_155      HTEGAIWK-DKPLTIEDVLASPIIADPLHMLEIVMPCVGGAAVVVASADV
MAV_5265|M.avium_104                HTDGAIWR-DTPLTVEDVLASPVIADPLHMLEIVMPCVGGAAVVVANADL
TH_1527|M.thermoresistible__bu      HTPGAIFE-DKPLTIEDVLASPVIAAPLRLLEIVMPVMGGAAVVIADERL
Mb3570c|M.bovis_AF2122/97           NNPKAYFY-GKPITIEDHQNSRWIAEPLRLLDCCQETDGAVAIVVTSAAR
Rv3540c|M.tuberculosis_H37Rv        NNPKAYFY-GKPITIEDHQNSRWIAEPLRLLDCCQETDGAVAIVVTSAAR
MMAR_5027|M.marinum_M               KNPKAYFY-QKPITIDDHQNSRWIAEPLRLLDCCQETDGAVAIVVTSAER
MUL_4101|M.ulcerans_Agy99           KNPKAYFY-QKPITIDDHQNSRWIAEPLRLLDCCQETDGAVAIVVTSAER
MAB_2051|M.abscessus_ATCC_1997      LNPAAIAHRSQRLTVEDVLASRPIAGPFHFYHCSIPCEGGGALVLGSARR
                                     .  *       :*:::   *  ** *::: .      *. *:*: .   

Mflv_2377|M.gilvum_PYR-GCK          AARAKNRPVWIKGFGEQVP---FKTPTYAEDLLQ--TPIVRAADTAFAMS
Mvan_4269|M.vanbaalenii_PYR-1       AARARNRPVWIKGFGEQVP---YKTPTYAEDLLQ--TPIARAADTAFTMS
MSMEG_6561|M.smegmatis_MC2_155      AAKAKNRPVWVKGFGEHVP---FKTPTYAEDLLD--TPMRRAAETAFTMS
MAV_5265|M.avium_104                AKRARHRPVWVKGFGEHVP---FKTPTYAEDLLR--TPIAAAADTAFAMT
TH_1527|M.thermoresistible__bu      ARRGRNRPVWVKGFGERVP---YKTPTYAEDLLQ--TPMITAAASAFGMA
Mb3570c|M.bovis_AF2122/97           ARDLKQRPVVIEAAAQGCSPDQYTMVSYYRPELDGLPEMGLVGRQLWAQS
Rv3540c|M.tuberculosis_H37Rv        ARDLKQRPVVIEAAAQGCSPDQYTMVSYYRPELDGLPEMGLVGRQLWAQS
MMAR_5027|M.marinum_M               ARDLQQRPAIIEAASQGSSPDQYTMVSYYRPELDGLPEMGLVGQQLWQQS
MUL_4101|M.ulcerans_Agy99           ARDLQQRPAIIEAASQGSSPDQYTMVSYYRPELDGLPEMGLVGQQLWQQS
MAB_2051|M.abscessus_ATCC_1997      ARAGKHRPVHLLGFGEGHTHGFLTSLARPG-----RTGAARSGPMAFERS
                                    *   ::**. : . .:  .    .  :         .     .   :  :

Mflv_2377|M.gilvum_PYR-GCK          GLTREQMDMVSIYDCYTITVLLSLEDAGFCDKGKGMEFVSSHDLTFRGDF
Mvan_4269|M.vanbaalenii_PYR-1       GLTRDQMDMVSIYDCYTITVLLSLEDAGFCEKGKGMEFVSQHDLTFRGDF
MSMEG_6561|M.smegmatis_MC2_155      GLGRDQMDMVSIYDCYTITVLLSLEDAGFCEKGKGMAFVSDHDLTFRGDF
MAV_5265|M.avium_104                GLSRAQMDMVSIYDCYTITVLLSLEDAGFCEKGRGMEFVADHDLTFRGDF
TH_1527|M.thermoresistible__bu      GLTPQDMDMVSIYDCYTITVLLSLEDAGFCPKGKGMQFVAEHDLTFRGDF
Mb3570c|M.bovis_AF2122/97           GLTPADVQTAVLYDHFTPFTLIQLEELGFCGKGEAKDFIADGAIEVGGRL
Rv3540c|M.tuberculosis_H37Rv        GLTPADVQTAVLYDHFTPFTLIQLEELGFCGKGEAKDFIADGAIEVGGRL
MMAR_5027|M.marinum_M               GLKPTDIQTAVLYDHFTPFTLIQLEELGFCGKGEAKDFIADGAIELGGRL
MUL_4101|M.ulcerans_Agy99           GLKPTDIQTAVLYDHFTPFTLIQLEELGFCGKGEAKDFIADGAIELGGRL
MAB_2051|M.abscessus_ATCC_1997      GRAPADIDIALLYDAFASNPAMILEEAGFVKPGGAGDFYRDGRADPGGDL
                                    *    ::: . :** ::    : **: **   * .  *  .      * :

Mflv_2377|M.gilvum_PYR-GCK          PLNTAGGQLGFGQAGNAGGMHHVCDATRQIMGRAGDAQVERCDRAFVSGN
Mvan_4269|M.vanbaalenii_PYR-1       PLNTAGGQLGFGQAGNAGGMHHVCDATRQIMGRAGEAQVGNCNRAFVSGN
MSMEG_6561|M.smegmatis_MC2_155      PLNTAGGQLGFGQAGLAGGMHHVCDATRQIMERAGAAQVRNCHRAFVSGN
MAV_5265|M.avium_104                PLNTAGGQLGFGQAGLAGGMHHVCDATRQIMGRAGAAQVPDCNRAFVSGN
TH_1527|M.thermoresistible__bu      PMNTAGGQLGYGQAGLAGGMHHVCDATRQIMGRAGVTQVPDCNRAFVSGN
Mb3570c|M.bovis_AF2122/97           PINTHGGQLG---EAYIHGMNGIAEGVRQLRG-TSVNPVAGVEHVLVTAG
Rv3540c|M.tuberculosis_H37Rv        PINTHGGQLG---EAYIHGMNGIAEGVRQLRG-TSVNPVAGVEHVLVTAG
MMAR_5027|M.marinum_M               PINTHGGQLG---EAYIHGMNGIAEGVRQLRG-TSVNPVPDVEHVLVTAG
MUL_4101|M.ulcerans_Agy99           PINTHGGQLG---EAYIHGMNGIAEGVRQLRG-TSVNPVPDVEHVLVTAG
MAB_2051|M.abscessus_ATCC_1997      PVNTDGGLIRFGHTGTSSGISQILEGYWQLSGRAEGRQVFGADTAFVHSY
                                    *:** ** :     .   *:  : :.  *:   :    *   . .:* . 

Mflv_2377|M.gilvum_PYR-GCK          GGILSEQTTLVLEGD-
Mvan_4269|M.vanbaalenii_PYR-1       GGILSEQTTLVLEGD-
MSMEG_6561|M.smegmatis_MC2_155      GGILSEQTALILEGD-
MAV_5265|M.avium_104                GGILSEQTTLILEGD-
TH_1527|M.thermoresistible__bu      GGILSEQTTLVLEGD-
Mb3570c|M.bovis_AF2122/97           TGVPTSGLILG-----
Rv3540c|M.tuberculosis_H37Rv        TGVPTSGLILG-----
MMAR_5027|M.marinum_M               TGVPTSGLILG-----
MUL_4101|M.ulcerans_Agy99           TGVPTSGLILG-----
MAB_2051|M.abscessus_ATCC_1997      GSMLCSHVSMVMEGAS
                                     .:  .   :