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M. smegmatis MC2 155 MSMEG_6168 (-)

annotation: type II secretion system protein F
coordinates: 6237917 - 6238549
length: 210

LPLPVALTAGVVAGTVVVRRRDRAAAQHRRDESAALQGALDVLVGELRVGAHPVDAFGAAAGESGGPVAE
GMRAVAARARLGADVAAGLDDVARASQLPGHWQRLAVCWRLAQTHGLALGTLMRAAHEDIVERERFSARV
RAAMAGPRTTALVLAGLPLAGIALGQAIGAAPVAFLVASGAGGWLLVIGVVLACAGLLWSDRITAEVKS*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. smegmatis MC2 155MSMEG_6168--100% (210)type II secretion system protein F

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb3682c-1e-6660.49% (205) transmembrane protein
M. gilvum PYR-GCKMflv_1385-6e-6762.38% (202) type II secretion system protein
M. tuberculosis H37RvRv3658c-1e-6660.49% (205) transmembrane protein
M. leprae Br4923-----
M. abscessus ATCC 19977MAB_0471-3e-5252.66% (207) hypothetical protein MAB_0471
M. marinum MMMAR_5146-9e-6559.62% (208) hypothetical protein MMAR_5146
M. avium 104MAV_0509-6e-6760.10% (208) type II secretion system protein F
M. thermoresistible (build 8)TH_3280-6e-4660.67% (150) PUTATIVE type II secretion system protein
M. ulcerans Agy99MUL_4231-8e-5758.82% (187) hypothetical protein MUL_4231
M. vanbaalenii PYR-1Mvan_5406-2e-6360.10% (208) type II secretion system protein

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_1385|M.gilvum_PYR-GCK          ---MTLAALALAVAVLTAPTDARLRAPVLRRTSTP----RRRLPGQLPAA
Mvan_5406|M.vanbaalenii_PYR-1       ---MTAAALALAAAVLVAPAGSRWRR-VLSAPPSR----RLRLPVPVCGA
TH_3280|M.thermoresistible__bu      --------------------------------------------------
Mb3682c|M.bovis_AF2122/97           MSGIASAALILSLALVVLPGSPRCRLTPDDTGRR----VLLVGARRVAWG
Rv3658c|M.tuberculosis_H37Rv        MSGIASAALILSLALVVLPGSPRCRLTPDDTGRR----VLLVGARRVAWG
MAV_0509|M.avium_104                MTGPVVGALLLAVALVVGPPSPRRRLGVAVTGSRRPSARRLAGLGWVAAG
MMAR_5146|M.marinum_M               MTGLVLAALMVAAAIAVLSVPVRRRISVNDVRGHS---NWLSATRWLGCL
MUL_4231|M.ulcerans_Agy99           MTGLVLAALMVAAAIAVLSVPVRRRISVNDVRGHS---NWLSATRWLGCL
MSMEG_6168|M.smegmatis_MC2_155      --------------------------------------------------
MAB_0471|M.abscessus_ATCC_1997      ---MTPQALVLLAAALLLVPQRYRRLDQPGMSPVR------WTGKLVAAP
                                                                                      

Mflv_1385|M.gilvum_PYR-GCK          IACLTV--AAVHTPTTAAALGLLLATLSARRRVTRAHRRRTAEAAALQDA
Mvan_5406|M.vanbaalenii_PYR-1       LLCAVT--ALLLSPAAVLAAALLMATLSVRSRAARRRRNRVTEAAALQGA
TH_3280|M.thermoresistible__bu      --------------------------------------------------
Mb3682c|M.bovis_AF2122/97           VGCVAVGVAALLPLPTVVAVAVLGATLGLRYRRRRRYLRRSREGQALEAA
Rv3658c|M.tuberculosis_H37Rv        VGCVAVGVAALLPLPTVVAVAVLGATLGLRYRRRRRYLRRSREGQALEAA
MAV_0509|M.avium_104                AGCAAL---AVLPLPSVLAGAVVAATAGLRHRRRGRIRRAAGEGRALETA
MMAR_5146|M.marinum_M               LACALAGAVLVMPLTTVLAAVVVAGTASRRRRRRLVRARGVREGRALEAA
MUL_4231|M.ulcerans_Agy99           LACALAGAVLVMPLTTVLAVAVVAGTASRRRRRRLVRARGVREGWALEAA
MSMEG_6168|M.smegmatis_MC2_155      ----------MLPLPVALTAGVVAGTVVVRRRDRAAAQHRRDESAALQGA
MAB_0471|M.abscessus_ATCC_1997      LSALVLTALWLLPLSVVVSAVVVAGTGALRWRRRRRSRVESEELDCTASG
                                                                                      

Mflv_1385|M.gilvum_PYR-GCK          LDVLVGELRVGAHPVAAITVAGHEARGRIAESLNAVAARALLGADVPAGL
Mvan_5406|M.vanbaalenii_PYR-1       LDVLIGELRVGAHPVAAMNTAAQESDARIAGALGAVAARALLGADVAAGL
TH_3280|M.thermoresistible__bu      --------------VSAVEVAAREVSGTTGLALREVAARARLGGEVSSGL
Mb3682c|M.bovis_AF2122/97           LELVVGELRAGAHPVRAFSIAADETGGPVAVALRAVAARARLGADVTAGL
Rv3658c|M.tuberculosis_H37Rv        LELVVGELRAGAHPVRAFSIAADETGGPVAVALRAVAARARLGADVTAGL
MAV_0509|M.avium_104                LDVLVGELRAGSHPVRAFDVAAGETAGPVAVALRSVAARARLGADVAAGL
MMAR_5146|M.marinum_M               LEILVGELRVGAHPVRAFGVAADETDGPVAAAMRGVAAHARLGADVTGGL
MUL_4231|M.ulcerans_Agy99           LEILVGELRVGAHPVRAFGVAADETDGPVAAAMRGVAAHARLGADVTGGL
MSMEG_6168|M.smegmatis_MC2_155      LDVLVGELRVGAHPVDAFGAAAGESGGPVAEGMRAVAARARLGADVAAGL
MAB_0471|M.abscessus_ATCC_1997      LDVVVGELRVGAHPVRAFEIAAVELNGAAGEAFAAIAARARLGVNVDR--
                                                  * *.  *. *  .  . .:  :**:* ** :*    

Mflv_1385|M.gilvum_PYR-GCK          RAEGRRSPSPGHWDRLAVCWQLAQTHGLAIAALMRAAQRDITERERFRGR
Mvan_5406|M.vanbaalenii_PYR-1       RAQGRRSLLPGHWDRLAVCWHLAQAQGLAIATLMLAAQRDIAERERFRGR
TH_3280|M.thermoresistible__bu      RSVAARSASPGNWERLAVCWRLAERYGLAMATLMRTAQHDIRERERFSAK
Mb3682c|M.bovis_AF2122/97           LAAARSSALPAYWERLAVCWQLGSDHGLAIASLMRAAQRDVAERQRFSAR
Rv3658c|M.tuberculosis_H37Rv        LAAARSSALPAYWERLAVCWQLGSDHGLAIASLMRAAQRDVAERQRFSAR
MAV_0509|M.avium_104                AAASRGSARPEHWQRLALCWRLAGDHGLGIATLMRAAQRDIAERQRFSAR
MMAR_5146|M.marinum_M               RAAARRSALPSHWERLAVYWQLASDHGLAIATLMRAAQRDVAQRQRFSAK
MUL_4231|M.ulcerans_Agy99           RAAARRSALPAHWERLAVYWQLASDHGLAIATLMRAAQRDVAQRQRFSAK
MSMEG_6168|M.smegmatis_MC2_155      DDVARASQLPGHWQRLAVCWRLAQTHGLALGTLMRAAHEDIVERERFSAR
MAB_0471|M.abscessus_ATCC_1997      -ALPRSVPARAQWNRITRSWSLAQRHGLAVADLLDACRADLQERQQFTAR
                                                *:*::  * *.   **.:. *: :.: *: :*::* .:

Mflv_1385|M.gilvum_PYR-GCK          VESGMAGARATAVILAGLPVLGVLLGHAIGAEPLAFLLSGGAGGWLLLVG
Mvan_5406|M.vanbaalenii_PYR-1       VEAGLAGARATAAILAGLPVLGVLLGHAIGAEPLSFLFSGGFGGWLLVTG
TH_3280|M.thermoresistible__bu      VHADLAGARTTATLLAALPVLGIGLGQAIGAEPVRFLCTDGIGAWLLVTG
Mb3682c|M.bovis_AF2122/97           VSAGMAGARASAAILAILPLLGVLLGQLIGARPLSFLLTGRVGGWLLVVG
Rv3658c|M.tuberculosis_H37Rv        VSAGMAGARASAAILAILPLLGVLLGQLIGARPLSFLLTGRVGGWLLVVG
MAV_0509|M.avium_104                VSSSLAGARATAAILAALPVLGVLLGQLIGARPLDFLLGGQVGGWLLLVG
MMAR_5146|M.marinum_M               VSAGLAGARASAGILAGLPVLGVVLGQLIGAQPLAFLLGGHLGGWLLVVG
MUL_4231|M.ulcerans_Agy99           VSAGLAGARASAGILAGLPVLGVVLGQLIGAQPLAFLLGGHLGGWLL--G
MSMEG_6168|M.smegmatis_MC2_155      VRAAMAGPRTTALVLAGLPLAGIALGQAIGAAPVAFLVASGAGGWLLVIG
MAB_0471|M.abscessus_ATCC_1997      VNAGLAGPRATAVVLTGLPVAGIGLGQMIGARPLSVLCAGGVGGALLVVG
                                    * : :**.*::* :*: **: *: **: *** *: .*  .  *. **  *

Mflv_1385|M.gilvum_PYR-GCK          TVFVCAGLLWSDRITVQVLT
Mvan_5406|M.vanbaalenii_PYR-1       TVFVCCGLLWSDRITTGVLT
TH_3280|M.thermoresistible__bu      AALLCCGQLWSDRIIEGVVK
Mb3682c|M.bovis_AF2122/97           LTLACAGLLWSDRITDRPVL
Rv3658c|M.tuberculosis_H37Rv        LTLACAGLLWSDRITDRPVL
MAV_0509|M.avium_104                ATLACAGLLWADRIVDRVMA
MMAR_5146|M.marinum_M               LALAAGGLWWSDRITDRVMP
MUL_4231|M.ulcerans_Agy99           FAWPWRPVVCGGRTGSPTG-
MSMEG_6168|M.smegmatis_MC2_155      VVLACAGLLWSDRITAEVKS
MAB_0471|M.abscessus_ATCC_1997      VTLACAGLLWADAITGKALR
                                     .        ..