For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. smegmatis MC2 155 MSMEG_5796 (-)

annotation: glycine cleavage T-protein (aminomethyl transferase)
coordinates: 5863663 - 5864742
length: 359

MSAVPTPEGSPDAGAVWHYGDPLGEQRSAATDAVVIDRSHRAVLALTGKDRQGWLHNISSQHVSAQPDGT
VTENLSLDMQGRVEDHWVQTELDGTTYLDTESWRGEPLAAYLRKMVFWSDVQIEPADLGVLSLLGPALAG
DAVLSALGLSALPEEATAQPLPGGGFVRRVPSEGLELDVLVARETLDDWKQRLVSAGVRPAGMWAYEAHR
VAAQRPRLGVDTDERTIPHEVGWIGGPGVGAVHLDKGCYRGQETVARVHNLGRPPRMLVLLHLDGSSDRP
ATGDPVLAGGRTVGRLGTVVDHVDDGPIALALVKRGLPAETELMTGGSVEVPASIDPDSLPPPDSVGAGR
LAIERLRHG
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. smegmatis MC2 155MSMEG_5796--100% (359)glycine cleavage T-protein (aminomethyl transferase)

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb0834c-1e-15272.75% (367) hypothetical protein Mb0834c
M. gilvum PYR-GCKMflv_1638-1e-15674.72% (356) glycine cleavage T protein (aminomethyl transferase)
M. tuberculosis H37RvRv0811c-1e-15272.75% (367) hypothetical protein Rv0811c
M. leprae Br4923MLBr_02203-1e-14670.22% (366) hypothetical protein MLBr_02203
M. abscessus ATCC 19977MAB_0730c-1e-11862.97% (370) hypothetical protein MAB_0730c
M. marinum MMMAR_4878-1e-16275.49% (359) hypothetical protein MMAR_4878
M. avium 104MAV_0750-1e-15374.93% (359) glycine cleavage T-protein (aminomethyl transferase)
M. thermoresistible (build 8)TH_0071-1e-15372.91% (358) CONSERVED HYPOTHETICAL PROTEIN
M. ulcerans Agy99MUL_0420-1e-16074.65% (359) hypothetical protein MUL_0420
M. vanbaalenii PYR-1Mvan_5109-1e-16677.72% (359) glycine cleavage T protein (aminomethyl transferase)

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_1638|M.gilvum_PYR-GCK          MALETAKVPVPD-GPDAGAAWHYGDPLGEQRAAADGAVIVDRSHRAVLTL
Mvan_5109|M.vanbaalenii_PYR-1       ----MSAVPAPDIGPDAGAVWHYGDPLGEQRAAAQGAVVVDRSHRAVLSL
MSMEG_5796|M.smegmatis_MC2_155      ----MSAVPTPEGSPDAGAVWHYGDPLGEQRSAATDAVVIDRSHRAVLAL
Mb0834c|M.bovis_AF2122/97           ----MAAVPAPDPGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTL
Rv0811c|M.tuberculosis_H37Rv        ----MAAVPAPDPGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTL
MLBr_02203|M.leprae_Br4923          ----MNAVLAPDPGPDAGAIWHFGDPLGEQRSAETDAVLVDRSHRATLTL
MMAR_4878|M.marinum_M               ----MSAVPAPDPGPDAGAIWHYGDPLGEQRAAETGAVLVDRSHRAVLTL
MUL_0420|M.ulcerans_Agy99           ----MSAVPAPDPGPDAGAIWHYGDPLGEQRAAETGAVLVDRSHRAVLTL
MAV_0750|M.avium_104                ---MTHPVPAPDTGPDAGAVWHYGDPLGEQRAAETEALVIDRSHRGVLTL
TH_0071|M.thermoresistible__bu      ----MSAVPSPESGPDAGTVWHHGDPFGEQRAATTEVVVVDRSHRAALTL
MAB_0730c|M.abscessus_ATCC_199      ----MTAVYVPEGNPDAGAVWHYGDPLGEQRAALTHAVLIDRSTRAVLAL
                                           *  *: .****: **.***:****:.   .:::*** *..*:*

Mflv_1638|M.gilvum_PYR-GCK          TGGERKSWLHTISSQHVSELPDGAVTENLSLDGQGRIEDHWVQTELNGRT
Mvan_5109|M.vanbaalenii_PYR-1       TGAERNSWLHTISSQHVSDLADGTVTENLSLDGQGRVEDHWVQTQLDGRT
MSMEG_5796|M.smegmatis_MC2_155      TGKDRQGWLHNISSQHVSAQPDGTVTENLSLDMQGRVEDHWVQTELDGTT
Mb0834c|M.bovis_AF2122/97           DGGDRQTWLHSISTQHVSDLPEGASTQNLSLDGQGRVEDHWIQTELGGTT
Rv0811c|M.tuberculosis_H37Rv        DGGDRQTWLHSISTQHVSDLPEGASTQNLSLDGQGRVEDHWIQTELGGTT
MLBr_02203|M.leprae_Br4923          IGSDRQTWLHSISTQHVSALPDGASTQNLSLDSQGRVEDHWIQTELGGTT
MMAR_4878|M.marinum_M               TGKDRQSWLHNISTQHVSELPEGASTQNLSLDGQGRVEDHWIQTELGATT
MUL_0420|M.ulcerans_Agy99           TGKDRQSWLHNISTQHVSELPEGASTQNLSLDGQGRVEDHWIQTELGATT
MAV_0750|M.avium_104                TGADRQTWLHSISTQYVSDLPEGASTQNLSLDGQGRVEDHWIQTELAGTT
TH_0071|M.thermoresistible__bu      TGGDRKSWLHSLSTQHVSELPDGAVTENLSLDAQGRVEDHWIQTELPGVT
MAB_0730c|M.abscessus_ATCC_199      SGPERLSWLHTVSSQHVADLRHGQTRENLSLDGQGRVEDHWVQTDLDGIT
                                     * :*  ***.:*:*:*:   .*   :***** ***:****:**:* . *

Mflv_1638|M.gilvum_PYR-GCK          VIDTEPARGEALESFLRKMVFWSDVAIESSDLAVLSLLGPGVADPAVLTA
Mvan_5109|M.vanbaalenii_PYR-1       VLDTEPWRGEPLLSFLRKMVFWADVVVEPADLGVLSLLGPGLTDPAVLDA
MSMEG_5796|M.smegmatis_MC2_155      YLDTESWRGEPLAAYLRKMVFWSDVQIEPADLGVLSLLGPALAGDAVLSA
Mb0834c|M.bovis_AF2122/97           YLDTEPWRGEPLLAYLRKMVFWSMVTPRAADMAVLSLLGPRLAEERVLDA
Rv0811c|M.tuberculosis_H37Rv        YLDTEPWRGEPLLAYLRKMVFWSMVTPRAADMAVLSLLGPRLAEERVLDA
MLBr_02203|M.leprae_Br4923          YLDTEPWRGEPLLEYLRKMVFWSEVTPGSADMAMLSLLGPRLTEQAVHNA
MMAR_4878|M.marinum_M               YLDTEPWRGEPLLNYLRKMVFWAEVTPDTADLAVLSLIGPQLSDQAVLDA
MUL_0420|M.ulcerans_Agy99           YLDTEPWRGEPLLNYLRKMVFWAEVTPDTADLAVLSLIGPQLSDQAVLDA
MAV_0750|M.avium_104                YLDTEPWRAGPLLDYLRKMVFWSDVTPAAADLAVLSLLGPKLAERAVLDA
TH_0071|M.thermoresistible__bu      HLDTEPWRGEPLLTYLRKMVFWSEVTVEPADLGVLSLLGPRAVDPALLET
MAB_0730c|M.abscessus_ATCC_199      YLDTESWRGQPLKDFLTKMVFWSKVEVAAADLKVFTLLGPDTAG--LAEK
                                     :***. *. .*  :* *****: *   .:*: :::*:**      :   

Mflv_1638|M.gilvum_PYR-GCK          LGLDALPPEGTAVELADGGYVRRLP---GSEVEVDLVVPRPEVTRWFDAL
Mvan_5109|M.vanbaalenii_PYR-1       VGLPALPAPNSAVELPGGGFIRRLP---GPAVEVDVVVPRDELAAWRDRL
MSMEG_5796|M.smegmatis_MC2_155      LGLSALPEEATAQPLPGGGFVRRVP---SEGLELDVLVARETLDDWKQRL
Mb0834c|M.bovis_AF2122/97           LGLDVLPAEWLAVPLAGGGIVRRMPDGLAGQIELDVVVKRGDRADWQRRL
Rv0811c|M.tuberculosis_H37Rv        LGLDVLPAEWLAVPLAGGGIVRRMPDGLAGQIELDVVVKRGDRADWQRRL
MLBr_02203|M.leprae_Br4923          LYLDALPDESTAVPLTAGSFVRRIPGAPAGQIELDLLVPRRESADWQSRL
MMAR_4878|M.marinum_M               LGLDALPADLMAVPLPGGGFARRMP-SSAGQIELDLLVPRGDTADWKHRL
MUL_0420|M.ulcerans_Agy99           LGLDALPADLMAVPLPGGGFARRMP-SSAGQIELDLLVPRDGTADWKHRL
MAV_0750|M.avium_104                LGVDALPAEAAAVPTRGG-FLRRMPAGPAGRLELDLVVPRAEAADWRNRL
TH_0071|M.thermoresistible__bu      VGAPPPPDGADAAPLPDGGFVRRLP---GRDTELDLVVPRAQVADWLDRL
MAB_0730c|M.abscessus_ATCC_199      LGIAALPELDNAVALPDGGLIRRVP-WPLAEATYDLLVPSG-----KGLA
                                    :     *    *     *   **:*         *::*            

Mflv_1638|M.gilvum_PYR-GCK          VAAGVRPAGLWAYEAHRVA----AQRPRLGIDTDERTIPHEVGWIGG-PG
Mvan_5109|M.vanbaalenii_PYR-1       VAAGVRPAGVWAYEAHRVA----ARRPRLGVDTDERTIPHEVGWIGG-PG
MSMEG_5796|M.smegmatis_MC2_155      VSAGVRPAGMWAYEAHRVA----AQRPRLGVDTDERTIPHEVGWIGG-PG
Mb0834c|M.bovis_AF2122/97           TQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTDERTIPHEVGWIGG-PG
Rv0811c|M.tuberculosis_H37Rv        TQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTDERTIPHEVGWIGG-PG
MLBr_02203|M.leprae_Br4923          AGVGVRSAGMWAYEAHRVA----ALRPRLGVDTDQRTIPHEVGWIGG-PG
MMAR_4878|M.marinum_M               TQAGVRPAGIWTYEAHRVA----AKRPRLGVDTDERTIPHEVGWIGG-PG
MUL_0420|M.ulcerans_Agy99           TQAGVRPAGIWTYEAHRVA----AKRPRLGVDTDERTIPHEVGWIGG-PG
MAV_0750|M.avium_104                AQAGVRPGGVWAYEAHRVA----ARRPRLGVDTDERTIPHEVGWIGG-PG
TH_0071|M.thermoresistible__bu      TGAGVRRAGVWAYEALRVA----AVRPRLGVDTDERTIPHEVGWIG----
MAB_0730c|M.abscessus_ATCC_199      ERLGVRPAGLWAFEALRVA----ATRPRLTLDTDERTIPHEVGWIAIGDD
                                       *** .*:*::** ***    * **** :***:**********.    

Mflv_1638|M.gilvum_PYR-GCK          VGAVHLDKGCYRGQETVARVHNLGKPPRMLVLVHLDGDGD-RPSPGDPLL
Mvan_5109|M.vanbaalenii_PYR-1       VGAVHLDKGCYRGQETVARVHNLGKPPRMLVLLHLDGASD-RPSTGDPLL
MSMEG_5796|M.smegmatis_MC2_155      VGAVHLDKGCYRGQETVARVHNLGRPPRMLVLLHLDGSSD-RPATGDPVL
Mb0834c|M.bovis_AF2122/97           AGAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLDESVQ-RPSTGDAVL
Rv0811c|M.tuberculosis_H37Rv        AGAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLDESVQ-RPSTGDAVL
MLBr_02203|M.leprae_Br4923          EGAVHLDKGCYRGQETVARVQNLGKPPRMLVLLHLDGSVE-RTSTGDAVL
MMAR_4878|M.marinum_M               IGAVHLDKGCYRGQETVARVHNLGKPPRMLVLLHLDGSTD-RPSTGDSVL
MUL_0420|M.ulcerans_Agy99           IGAVHLDKGCYRGQETVARVQNLGKPPRMLVLLHLDGSTD-RPSTGDSVL
MAV_0750|M.avium_104                QGAVHLDKGCYRGQETVARVHNLGRPPRMLVLLHLDGSVD-RPATGDPVQ
TH_0071|M.thermoresistible__bu      -AAVHLDKGCYRGQETVARVHNLGKPPRMLALLHLDGSTEDRPATGDPVL
MAB_0730c|M.abscessus_ATCC_199      PRAVHLAKGCYRGQETVARVHNLGKPPRALVLLHLDGSAD-RPAPGDEVA
                                      **** *************:***:*** *.*:***   : *.:.** : 

Mflv_1638|M.gilvum_PYR-GCK          AGGRAVGRLGTVVDHVDEGVIALALVKRGLPVDTAL---TTGG-EVQVAA
Mvan_5109|M.vanbaalenii_PYR-1       AGGRTVGRLGTVVDHVDEGVIALALLKRGLPADTAL---TTGG-EVHAAA
MSMEG_5796|M.smegmatis_MC2_155      AGGRTVGRLGTVVDHVDDGPIALALVKRGLPAETEL---MTGG-SVEVPA
Mb0834c|M.bovis_AF2122/97           AGGRTVGRLGTVVEHVELGPVALALLKRGLPGDTAL---VTGP-EAEVAA
Rv0811c|M.tuberculosis_H37Rv        AGGRTVGRLGTVVEHVELGPVALALLKRGLPGDTAL---VTGP-EAEVAA
MLBr_02203|M.leprae_Br4923          ANSGAVGRLGTVVEHVDLGPVALALLKRGLPTDTELTIELEGPQDGSVAA
MMAR_4878|M.marinum_M               AGGRSVGRVGTVVDHVDLGPVALALVKRGLPADTAL---MTGA-EATIPA
MUL_0420|M.ulcerans_Agy99           AGERSVGRVGTVVDHVDLGPVALALAKRGLPADTAL---MTGA-EATIPA
MAV_0750|M.avium_104                AGGRAVGRLGTVVDHVDLGPIALALLKRGLPADTAL---ATGP-QAAVAA
TH_0071|M.thermoresistible__bu      AGGRAVGRLGTVIDHVDLGPIALALVKRGLPADTEL---VTGG-AVQIAA
MAB_0730c|M.abscessus_ATCC_199      AAGRAVGRVGSVVDHVDLGPIALALVKRSVIEALANG-NPAPLTAGPSPA
                                    *   :***:*:*::**: * :**** **.:                  .*

Mflv_1638|M.gilvum_PYR-GCK          AIDPDSVPPADVVGAGRLAIDRLRTGGREEP-
Mvan_5109|M.vanbaalenii_PYR-1       TIDPDSMPPADGVGAGRLAVDRLRGGTA----
MSMEG_5796|M.smegmatis_MC2_155      SIDPDSLPPPDSVGAGRLAIERLRHG------
Mb0834c|M.bovis_AF2122/97           VIDVDSLPPADDVGAGRRAVERLRGGIR----
Rv0811c|M.tuberculosis_H37Rv        VIDVDSLPPADDVGAGRRAVERLRGGIR----
MLBr_02203|M.leprae_Br4923          VIDPDSLPAADEIGVGRLAIERLRG--R----
MMAR_4878|M.marinum_M               LIDAQSLPPADEVGAGRLALDRLRGSAR----
MUL_0420|M.ulcerans_Agy99           LIDAQSLPPADEVGAGRLALDRLRGSAR----
MAV_0750|M.avium_104                VIDPDSLPAAEQIGAGRLAVERLRGGAG----
TH_0071|M.thermoresistible__bu      SIDADSVPDTDTGGAGRRAVERLRGRAQ----
MAB_0730c|M.abscessus_ATCC_199      AVDLDLLPDLHAEQRGRDAVNRLRQGSGQPGG
                                     :* : :*  .    ** *::***