For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSPSPAAANRSEVGGPLPGLGADLLAVVARLNRLATQRIQMPLPAAQARLLATIEAQGEARIGDLAAVDH CSQPTMTTQVRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAAIEPQLALLPPADRRVLA DAVDVLRRLLDHAATTPGRATRQ
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv2327 | - | - | 100% (163) | hypothetical protein Rv2327 |
M. tuberculosis H37Rv | Rv0042c | - | 1e-15 | 42.99% (107) | MarR family transcriptional regulator |
M. tuberculosis H37Rv | Rv0880 | - | 1e-11 | 30.37% (135) | MarR family transcriptional regulator |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2354 | - | 5e-87 | 100.00% (163) | hypothetical protein Mb2354 |
M. gilvum PYR-GCK | Mflv_2729 | - | 1e-48 | 67.13% (143) | MarR family transcriptional regulator |
M. leprae Br4923 | MLBr_02696 | - | 1e-15 | 42.06% (107) | putative MarR-family regulatory protein |
M. abscessus ATCC 19977 | MAB_0157 | - | 2e-33 | 48.57% (140) | putative transcriptional regulator MarR |
M. marinum M | MMAR_3627 | - | 1e-68 | 84.81% (158) | hypothetical protein MMAR_3627 |
M. avium 104 | MAV_2081 | - | 1e-61 | 84.83% (145) | transcriptional regulator, MarR family protein |
M. smegmatis MC2 155 | MSMEG_4471 | - | 1e-50 | 73.91% (138) | MarR-family protein transcriptional regulator |
M. thermoresistible (build 8) | TH_0729 | - | 5e-50 | 71.22% (139) | CONSERVED HYPOTHETICAL PROTEIN |
M. ulcerans Agy99 | MUL_1238 | - | 5e-68 | 84.18% (158) | hypothetical protein MUL_1238 |
M. vanbaalenii PYR-1 | Mvan_3807 | - | 1e-49 | 71.74% (138) | MarR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment Rv2327|M.tuberculosis_H37Rv ---------------------------------------------MSPSP Mb2354|M.bovis_AF2122/97 ---------------------------------------------MSPSP MMAR_3627|M.marinum_M ---------------------------------------------MTSS- MUL_1238|M.ulcerans_Agy99 ---------------------------------------------MTSS- MAV_2081|M.avium_104 ---------------------------------------------MDNVV MSMEG_4471|M.smegmatis_MC2_155 ---------------------------------------------MTYE- TH_0729|M.thermoresistible__bu ----------------------------------------MKPPAVDPS- Mflv_2729|M.gilvum_PYR-GCK -----------------------------------------------MS- Mvan_3807|M.vanbaalenii_PYR-1 -----------------------------------------------MS- MAB_0157|M.abscessus_ATCC_1997 ---------------------------------------------MSTT- MLBr_02696|M.leprae_Br4923 MFSYITTKSWNPGNQSRYSRPRRLSAYNGLYPKYFDVLDFTNDDPLHPAP Rv2327|M.tuberculosis_H37Rv AAANRSEVGGPLPGLGADLLAVVARLN----------------------- Mb2354|M.bovis_AF2122/97 AAANRSEVGGPLPGLGADLLAVVARLN----------------------- MMAR_3627|M.marinum_M ATANQAQVA---HGLGADLLAVVARLN----------------------- MUL_1238|M.ulcerans_Agy99 ATANQAQVA---HGLGADLLAVVARLN----------------------- MAV_2081|M.avium_104 DTAK-LEGG---QGLGADLLAVVARLN----------------------- MSMEG_4471|M.smegmatis_MC2_155 ------------TELGADLLAVVARLN----------------------- TH_0729|M.thermoresistible__bu ------------TSLGADLLWVVSRIN----------------------- Mflv_2729|M.gilvum_PYR-GCK ------------STLGSDLLSVVARIN----------------------- Mvan_3807|M.vanbaalenii_PYR-1 ------------STLGSDLLAVVARIN----------------------- MAB_0157|M.abscessus_ATCC_1997 ------------DGLTADVLTVIARLN----------------------- MLBr_02696|M.leprae_Br4923 PHLRPPLQLAHTRSLNARHIALNCRLMADSEFTAHEVTELADGLHRALSK * : : : .*: Rv2327|M.tuberculosis_H37Rv -------RLATQRIQMPLPAAQARLLATIEAQGEARIGDLAAVDHCSQPT Mb2354|M.bovis_AF2122/97 -------RLATQRIQMPLPAAQARLLATIEAQGEARIGDLAAVDHCSQPT MMAR_3627|M.marinum_M -------RLATQRIQMPLPSAQARLLATIEAQGEARIGDLAAVDHCSQPT MUL_1238|M.ulcerans_Agy99 -------RLATQRIQMPLPSAQARLLATIEAQGEARIGDLAAVDHCSQPT MAV_2081|M.avium_104 -------RLATQRIQMPLPAAQARLLATIEAHGEARIGDLAAVDHCSQPT MSMEG_4471|M.smegmatis_MC2_155 -------RLATQRTRLPLPYAQARLLSTIEDQGEARISDLALLDHCSQPT TH_0729|M.thermoresistible__bu -------RLATQRIRLPLPVAQARLLSTIQDRGSARISDLAVLDHCSQPT Mflv_2729|M.gilvum_PYR-GCK -------RLANQRVRMPVPFAQARLLSTIEDRGEARISDLAALDHCSQPT Mvan_3807|M.vanbaalenii_PYR-1 -------RLANQRVRMPVPFAQARLLSTIEDKGEARISDLAALDHCSQPT MAB_0157|M.abscessus_ATCC_1997 -------RWVSSYADLPVPTGQARLLALVGEMEDARISDLAQADHCSQPT MLBr_02696|M.leprae_Br4923 LFSILRRRTPNGAVSGELTLAQLSILVTLLDQGPIRMTDLAAHERVRTPT * . :. .* :* : *: *** :: ** Rv2327|M.tuberculosis_H37Rv MTTQVRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAAIE Mb2354|M.bovis_AF2122/97 MTTQVRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAAIE MMAR_3627|M.marinum_M MTTQVRRLEDAGMVTRTVDPGDARAVRIRITPEGMRTLSAVRTDRAAAIE MUL_1238|M.ulcerans_Agy99 MTTQVRRLEDAGMVTRTVDPGDARAVRIRITPEGMRTLSAVRTDRAAAIE MAV_2081|M.avium_104 MTTQVRRLEEAGLVTRTVDPGDARAVRIRITAEGRRTLNAVRADRAAAIQ MSMEG_4471|M.smegmatis_MC2_155 MTTQVRRLEEAGLVSRTADPGDARAVLIRITEEGRKTLAQARADRAAAIN TH_0729|M.thermoresistible__bu MTTQVRRLEEAGLVSRTVDPDDGRAVRISITPEGVRTLAQVRADRAAAID Mflv_2729|M.gilvum_PYR-GCK MTTQVRRLEDAGLVARTADPNDARAVLIRITPAGVSALRQARADRGAAVD Mvan_3807|M.vanbaalenii_PYR-1 MTTQVRRLEDAGMVTRTTDPKDARAVLIRITPDGVAALRQARADRGAAID MAB_0157|M.abscessus_ATCC_1997 MTVQLKRLQDVGYVERRVDPADKRAQRIKLTSKGREALVAMRAQRQGVLD MLBr_02696|M.leprae_Br4923 TTVAIRRLEKIGLVKRSRDLSDLRAVLVDITPRGRTVHGESLANRRAALT *. ::**:. * * * * * ** : :* * . ::* ..: Rv2327|M.tuberculosis_H37Rv PQLALLPPADRRVLADAVDVLRRLLDHAATTP---GRATRQ--------- Mb2354|M.bovis_AF2122/97 PQLALLPPADRRVLADAVDVLRRLLDHAATTP---GRATRQ--------- MMAR_3627|M.marinum_M PQLARLEPSDRQVLADAVEVLRRLLDNAAATP---GRNTL---------- MUL_1238|M.ulcerans_Agy99 PQLARLEPSDRQVLAGAVEVLRRLLDNAAATP---GRNTL---------- MAV_2081|M.avium_104 PQLALLDAEDRQVLRQAVDVLRRLLDNASLASSLAGRRQTSLRLVAGPGA MSMEG_4471|M.smegmatis_MC2_155 PRLERLSAEDRQTLVDAVEVIRKLLADVAEHP-LPEEN------------ TH_0729|M.thermoresistible__bu PYIDRLSDTDRAVLADAVRVMRQLLADAADPAVLPADPPSRPHESTELR- Mflv_2729|M.gilvum_PYR-GCK PYLERLDDTDRATLTQAVDIMRRLVEDATSPSAVPR-------------- Mvan_3807|M.vanbaalenii_PYR-1 PHLERLSDADRACLAQAVGVMRRLIEGATTPSS----------------- MAB_0157|M.abscessus_ATCC_1997 PWLSTLPAEEQRTLAEAAAILERLTRRMAAQSG----------------- MLBr_02696|M.leprae_Br4923 TMLSQLPTSDLNILKNALAPLQRLASGEPVSSPAGDSPACKQA------- . : * : * * :.:* . . Rv2327|M.tuberculosis_H37Rv ---- Mb2354|M.bovis_AF2122/97 ---- MMAR_3627|M.marinum_M ---- MUL_1238|M.ulcerans_Agy99 ---- MAV_2081|M.avium_104 RVDT MSMEG_4471|M.smegmatis_MC2_155 ---- TH_0729|M.thermoresistible__bu ---- Mflv_2729|M.gilvum_PYR-GCK ---- Mvan_3807|M.vanbaalenii_PYR-1 ---- MAB_0157|M.abscessus_ATCC_1997 ---- MLBr_02696|M.leprae_Br4923 ----