For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VVDTRSVEAISEMIITGTDLLWRHLVDRTALSSSATLLLNRLERQGPMRLTALAEAEGASQSGMTQLVQR LEQQGLVERCSDPEDGRARLVAISEAGRKQWDTRAEIRRQRLTGLLAAVPADDQVALALAAQIGARVLTQ MREIADAGLSE
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_0188 | - | - | 100% (151) | MarR-family protein transcriptional regulator |
| M. smegmatis MC2 155 | MSMEG_4471 | - | 2e-12 | 36.97% (119) | MarR-family protein transcriptional regulator |
| M. smegmatis MC2 155 | MSMEG_5668 | - | 1e-08 | 28.91% (128) | putative transcriptional regulator |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2354 | - | 2e-09 | 35.19% (108) | hypothetical protein Mb2354 |
| M. gilvum PYR-GCK | Mflv_0856 | - | 1e-10 | 40.19% (107) | MarR family transcriptional regulator |
| M. tuberculosis H37Rv | Rv2327 | - | 2e-09 | 35.19% (108) | hypothetical protein Rv2327 |
| M. leprae Br4923 | MLBr_02696 | - | 8e-09 | 38.78% (98) | putative MarR-family regulatory protein |
| M. abscessus ATCC 19977 | MAB_0157 | - | 4e-09 | 36.56% (93) | putative transcriptional regulator MarR |
| M. marinum M | MMAR_3627 | - | 5e-09 | 34.26% (108) | hypothetical protein MMAR_3627 |
| M. avium 104 | MAV_4734 | - | 1e-09 | 36.59% (82) | MarR-family protein regulatory protein |
| M. thermoresistible (build 8) | TH_0729 | - | 4e-10 | 30.41% (148) | CONSERVED HYPOTHETICAL PROTEIN |
| M. ulcerans Agy99 | MUL_1238 | - | 4e-09 | 34.26% (108) | hypothetical protein MUL_1238 |
| M. vanbaalenii PYR-1 | Mvan_6049 | - | 8e-10 | 35.82% (134) | MarR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_0856|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_6049|M.vanbaalenii_PYR-1 --------------------------------------------------
MLBr_02696|M.leprae_Br4923 MFSYITTKSWNPGNQSRYSRPRRLSAYNGLYPKYFDVLDFTNDDPLHPAP
Mb2354|M.bovis_AF2122/97 --------------------------------------------------
Rv2327|M.tuberculosis_H37Rv --------------------------------------------------
MMAR_3627|M.marinum_M --------------------------------------------------
MUL_1238|M.ulcerans_Agy99 --------------------------------------------------
TH_0729|M.thermoresistible__bu --------------------------------------------------
MAB_0157|M.abscessus_ATCC_1997 --------------------------------------------------
MAV_4734|M.avium_104 --------------------------------------------------
MSMEG_0188|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_0856|M.gilvum_PYR-GCK --------------------------MVT-----TDAQVSELAGELQRVL
Mvan_6049|M.vanbaalenii_PYR-1 --------------------------MVP-----TEARVSELASELQRVL
MLBr_02696|M.leprae_Br4923 PHLRPPLQLAHTRSLNARHIALNCRLMADS--EFTAHEVTELADGLHRAL
Mb2354|M.bovis_AF2122/97 --------------------------MSPSPAAANRSEVGGPLPGLGADL
Rv2327|M.tuberculosis_H37Rv --------------------------MSPSPAAANRSEVGGPLPGLGADL
MMAR_3627|M.marinum_M --------------------------MTSS-ATANQAQVA---HGLGADL
MUL_1238|M.ulcerans_Agy99 --------------------------MTSS-ATANQAQVA---HGLGADL
TH_0729|M.thermoresistible__bu --------------------------MKPPAVDPS--------TSLGADL
MAB_0157|M.abscessus_ATCC_1997 --------------------------MSTT-------------DGLTADV
MAV_4734|M.avium_104 -----------------------------------MDGVSDSAVAAARDI
MSMEG_0188|M.smegmatis_MC2_155 --------------------------MVDT-------------RSVEAIS
Mflv_0856|M.gilvum_PYR-GCK SKLMSVMR-HTGRTPTSGDLTLAQLSILLTLIDQGPMRMTELAAHEKVRT
Mvan_6049|M.vanbaalenii_PYR-1 SKVLSVMR-HTGRTATSGDLTLAQLSILLTLFDQGPMRMTELAAHEKVRT
MLBr_02696|M.leprae_Br4923 SKLFSILRRRTPNGAVSGELTLAQLSILVTLLDQGPIRMTDLAAHERVRT
Mb2354|M.bovis_AF2122/97 LAVVARLN-RLATQRIQMPLPAAQARLLATIEAQGEARIGDLAAVDHCSQ
Rv2327|M.tuberculosis_H37Rv LAVVARLN-RLATQRIQMPLPAAQARLLATIEAQGEARIGDLAAVDHCSQ
MMAR_3627|M.marinum_M LAVVARLN-RLATQRIQMPLPSAQARLLATIEAQGEARIGDLAAVDHCSQ
MUL_1238|M.ulcerans_Agy99 LAVVARLN-RLATQRIQMPLPSAQARLLATIEAQGEARIGDLAAVDHCSQ
TH_0729|M.thermoresistible__bu LWVVSRIN-RLATQRIRLPLPVAQARLLSTIQDRGSARISDLAVLDHCSQ
MAB_0157|M.abscessus_ATCC_1997 LTVIARLN-RWVSSYADLPVPTGQARLLALVGEMEDARISDLAQADHCSQ
MAV_4734|M.avium_104 RVVFSRLRRRLKDIAVDG-LTPSQTAVLTRLWKEGPSSASALAAAERVRP
MSMEG_0188|M.smegmatis_MC2_155 EMIITGTDLLWRHLVDRTALSSSATLLLNRLERQGPMRLTALAEAEGASQ
:.: :. . :* : ** :
Mflv_0856|M.gilvum_PYR-GCK PTTTVAIRRLEKLGLVKRDRDPSDLRAVLVDITPEGLAQHQEALAIRQAH
Mvan_6049|M.vanbaalenii_PYR-1 PTTTVAIRRLEKLGLVKRDRDPSDLRAVLVDITPEGLAQHREALASRQAH
MLBr_02696|M.leprae_Br4923 PTTTVAIRRLEKIGLVKRSRDLSDLRAVLVDITPRGRTVHGESLANRRAA
Mb2354|M.bovis_AF2122/97 PTMTTQVRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAA
Rv2327|M.tuberculosis_H37Rv PTMTTQVRRLEDAGLVTRTADPGDARAVRIRITPEGIRTLTAVRADRAAA
MMAR_3627|M.marinum_M PTMTTQVRRLEDAGMVTRTVDPGDARAVRIRITPEGMRTLSAVRTDRAAA
MUL_1238|M.ulcerans_Agy99 PTMTTQVRRLEDAGMVTRTVDPGDARAVRIRITPEGMRTLSAVRTDRAAA
TH_0729|M.thermoresistible__bu PTMTTQVRRLEEAGLVSRTVDPDDGRAVRISITPEGVRTLAQVRADRAAA
MAB_0157|M.abscessus_ATCC_1997 PTMTVQLKRLQDVGYVERRVDPADKRAQRIKLTSKGREALVAMRAQRQGV
MAV_4734|M.avium_104 QSMATILAALGQRRLIERSPDPNDKRRQVVSLTAAGRKRAESDRRAREEW
MSMEG_0188|M.smegmatis_MC2_155 SGMTQLVQRLEQQGLVERCSDPEDGRARLVAISEAGRKQWDTRAEIRRQR
: : * . : * * * * : :: * *
Mflv_0856|M.gilvum_PYR-GCK LASLLGK-LSCDELDALTKALAPLERIAE---------------------
Mvan_6049|M.vanbaalenii_PYR-1 LASLLSK-LSDEELDALTKALAPLERIAE---------------------
MLBr_02696|M.leprae_Br4923 LTTMLSQ-LPTSDLNILKNALAPLQRLASGEPVS------SPAGDSPACK
Mb2354|M.bovis_AF2122/97 IEPQLAL-LPPADRRVLADAVDVLRRLLDHAAT-------TPGRATRQ--
Rv2327|M.tuberculosis_H37Rv IEPQLAL-LPPADRRVLADAVDVLRRLLDHAAT-------TPGRATRQ--
MMAR_3627|M.marinum_M IEPQLAR-LEPSDRQVLADAVEVLRRLLDNAAA-------TPGRNTL---
MUL_1238|M.ulcerans_Agy99 IEPQLAR-LEPSDRQVLAGAVEVLRRLLDNAAA-------TPGRNTL---
TH_0729|M.thermoresistible__bu IDPYIDR-LSDTDRAVLADAVRVMRQLLADAADPAVLPADPPSRPHESTE
MAB_0157|M.abscessus_ATCC_1997 LDPWLST-LPAEEQRTLAEAAAILERLTRRMAA-------QSG-------
MAV_4734|M.avium_104 LARAIQERYTEAERRVIVEALSLLERLTEQ--------------------
MSMEG_0188|M.smegmatis_MC2_155 LTGLLAA-VPADDQVALALAAQIGARVLTQMREIADAGLSE---------
: : : : * ::
Mflv_0856|M.gilvum_PYR-GCK --
Mvan_6049|M.vanbaalenii_PYR-1 --
MLBr_02696|M.leprae_Br4923 QA
Mb2354|M.bovis_AF2122/97 --
Rv2327|M.tuberculosis_H37Rv --
MMAR_3627|M.marinum_M --
MUL_1238|M.ulcerans_Agy99 --
TH_0729|M.thermoresistible__bu LR
MAB_0157|M.abscessus_ATCC_1997 --
MAV_4734|M.avium_104 --
MSMEG_0188|M.smegmatis_MC2_155 --