For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VLTALLWGLVAASSLLVGAVAGTVRDWNERLVGLVLGFGAGALISSISFELAEEGVRVSGALAVALGLAI GAVVFYVADKTVDRMGRTGGGAGLPLLLGALLDGIPEQAVLGIGIAGGAGVSMALLVAIFVSNLPESIGS ASDMRSAGHPVRTILGGWAAISALCAVATVGGYQLQKVAGAALQGGINGFAAGALLVMLVGSMIPEATQK ARENAGLAAVLGFAVAAGLSLAT
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_5407 | - | - | 100% (233) | integral membrane protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0326c | - | 1e-06 | 28.26% (230) | integral membrane protein |
M. gilvum PYR-GCK | Mflv_4403 | - | 4e-31 | 37.39% (222) | zinc/iron permease |
M. tuberculosis H37Rv | Rv0318c | - | 3e-07 | 28.70% (230) | integral membrane protein |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_0595 | - | 7e-05 | 24.35% (230) | transcriptional regulatory protein |
M. avium 104 | - | - | - | - | - |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_0554 | - | 2e-05 | 25.11% (231) | transcriptional regulatory protein |
M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_0595|M.marinum_M ------MFVSIGPGRF------GVSTLTTAAALVAFPVIAGIIGGAVAVV MUL_0554|M.ulcerans_Agy99 ------MFVSIGPGRF------GVSTLTTAAALVAFPVIAGIIGGAVAVV Mb0326c|M.bovis_AF2122/97 MSLAVTMFKRARAEIFDRNREVGISNVTTAASLVTFPVLAGILGGVVPSV Rv0318c|M.tuberculosis_H37Rv MSLAVTMFKRARAEIFDRNREVGISNVTTAASLVTFPVLAGILGGVVPSV MSMEG_5407|M.smegmatis_MC2_155 --------------------------MLTALLWGLVAASSLLVGAVAGTV Mflv_4403|M.gilvum_PYR-GCK --------------------------MMMTIAVVLAVSGALIAGAAWGIY : : : : *.. MMAR_0595|M.marinum_M RTPSTALVSGVQHFAAGVVMAAVATEVLPDLRARGPLWLIILGFSAGVAL MUL_0554|M.ulcerans_Agy99 RTPSAALVSGVQHFAAGVVMAAVATEVLPDLRARGPLWLIILGFSAGVAL Mb0326c|M.bovis_AF2122/97 RTPSAAMVSGVQHFAAGIVMAAVAGEVLPDLRSRGPLWLIVVGFSAGVAV Rv0318c|M.tuberculosis_H37Rv RTPSAAMVSGVQHFAAGIVMAAVAGEVLPDLRSRGPLWLIVVGFSAGVAV MSMEG_5407|M.smegmatis_MC2_155 RDWNERLVGLVLGFGAGALISSISFELAEEGVRVSGALAVALGLAIGAVV Mflv_4403|M.gilvum_PYR-GCK GTLPEGLEGFIVALAGGALIFSVVLELVEPAVRDLHLLLVALVVLTGAMV : . : :..* :: :: *: : : . *. : MMAR_0595|M.marinum_M LAGFRQFEDHGPHGEDEDGHDDVRAGGQVPVGFLAVVAVDLFIDGLLVAT MUL_0554|M.ulcerans_Agy99 LVGFRQFEDHGPHGEDEDGHDDVRAGGQVPVGFLAVVAVDLFIDGLLVAT Mb0326c|M.bovis_AF2122/97 LVALRRFDGHG---EHQDG-DDV---GELPVGFLTVVAVDLFIDGLLVAT Rv0318c|M.tuberculosis_H37Rv LVALRRFDGHG---EHQDG-DDV---GELPVGFLTVVAVDLFIDGLLVAT MSMEG_5407|M.smegmatis_MC2_155 FYVADKTVDRM----GRTG-------GGAGLPLLLGALLDGIPEQAVLGI Mflv_4403|M.gilvum_PYR-GCK FAGLDRLVKAK----ARNS-------GGAG--LLVAITLDGVPENLALGV : : . . * :* :* . : :. MMAR_0595|M.marinum_M GAT-VSRRTAIIITIALTVEVLFLGVSVALRLTRSGVPKARAAALTGGVS MUL_0554|M.ulcerans_Agy99 GAT-VSRRTAIIITIALTVEVLFLGVSVALRLTRSGVPKARAAALTGGVS Mb0326c|M.bovis_AF2122/97 GAT-VSSRTAIIITIALTVEVLFLGLAVALRLAGSGMPRIRAAATTSALS Rv0318c|M.tuberculosis_H37Rv GAT-VSSRTAIIITIALTVEVLFLGLAVALRLAGSGMPRIRAAATTSALS MSMEG_5407|M.smegmatis_MC2_155 GIAGGAGVSMALLV-AIFVSNLPESIGSASDMRSAGHPVRTILGGWAAIS Mflv_4403|M.gilvum_PYR-GCK ALIGAGPLHVAALSGSIFLSNLPEAAGGAKEMSEGGRSNGKVFALWGATA . . : :: :. * . . * : .* . . .. : MMAR_0595|M.marinum_M LATAVGGVLGALVLANAGGTVLTLVLAFAAAALLWLVVEELLVEAHEGEE MUL_0554|M.ulcerans_Agy99 LATAVGGVPGALVLANAGGTVLTLVLAFAAAALLWLVVEELLVEAHEGEE Mb0326c|M.bovis_AF2122/97 LVIAVGGVSGAVALGRAGNTVLTLVLAFAAAALLWLVVEELLVEAHETPE Rv0318c|M.tuberculosis_H37Rv LVIAVGGVSGAVALGRAGNTVLTLVLAFAAGALLWLVVEELLVEAHETPE MSMEG_5407|M.smegmatis_MC2_155 ALCAVATVGGYQLQKVAGAALQGGINGFAAGALLVMLVGSMIPEATQK-A Mflv_4403|M.gilvum_PYR-GCK VLLSVAALAGNFLLAGAPAALLAAIKCFAGGAVVSSLATEVFPQAFAK-D :*. : * * :: : **..*:: :. .:: :* MMAR_0595|M.marinum_M RAWMAIMFFAGFLILYSLGVME MUL_0554|M.ulcerans_Agy99 RAWMAIMFFAGFLILYSLGVME Mb0326c|M.bovis_AF2122/97 RPWMAVMFFAGFLILYGLGVME Rv0318c|M.tuberculosis_H37Rv RPWMAVMFFAGFLILYGLGVME MSMEG_5407|M.smegmatis_MC2_155 RENAGLAAVLGFAVAAGLSLAT Mflv_4403|M.gilvum_PYR-GCK SYQAGIATALGLVLAVSLDHLA .: *: : .*.