For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VGMTDSPRRDGNEPTQQFGSGYPVEYPDPAYANQTPYGGGYPAAPNPVSNPPANPQPTQQMPAYPPYGYD PYASGQYGSGQYGGFPPAGPPPEPEPEDREPRMWLWVLAALAVLVVVGLVIALVIANGSRQETVVAPPVS PQPSFSEPTTTAPSPSRTPRPVPVPPRTSAPTSPTTPGATETVVYEVAGEGRAINITYLDTGGMLQTEFN VLLPWSKQVELPEPAKETASVSVLNFGPEVSCTVTVDGVQTQHRTGSGLTICVGTMR
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_4720 | - | - | 100% (267) | hypothetical protein MSMEG_4720 |
| M. smegmatis MC2 155 | MSMEG_1932 | - | 5e-19 | 33.01% (209) | MmpS3 protein |
| M. smegmatis MC2 155 | MSMEG_4265 | - | 2e-14 | 26.84% (313) | MmpS3 protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2535 | - | 3e-58 | 47.86% (280) | proline rich membrane protein |
| M. gilvum PYR-GCK | Mflv_2547 | - | 1e-74 | 52.54% (276) | hypothetical protein Mflv_2547 |
| M. tuberculosis H37Rv | Rv2507 | - | 3e-58 | 47.86% (280) | proline rich membrane protein |
| M. leprae Br4923 | MLBr_00431 | - | 8e-49 | 42.49% (273) | hypothetical protein MLBr_00431 |
| M. abscessus ATCC 19977 | MAB_1539c | - | 2e-36 | 38.78% (245) | hypothetical protein MAB_1539c |
| M. marinum M | MMAR_3854 | - | 2e-51 | 48.40% (250) | proline rich membrane protein |
| M. avium 104 | MAV_1668 | - | 5e-55 | 46.36% (261) | hypothetical protein MAV_1668 |
| M. thermoresistible (build 8) | TH_1385 | - | 1e-80 | 59.78% (271) | POSSIBLE CONSERVED PROLINE RICH MEMBRANE PROTEIN |
| M. ulcerans Agy99 | MUL_3786 | - | 4e-50 | 46.37% (248) | proline rich membrane protein |
| M. vanbaalenii PYR-1 | Mvan_4096 | - | 4e-75 | 50.67% (300) | hypothetical protein Mvan_4096 |
CLUSTAL 2.0.9 multiple sequence alignment
MSMEG_4720|M.smegmatis_MC2_155 --MGMTDSPRRDGNE-----PTQQ----------------------FGSG
TH_1385|M.thermoresistible__bu ----MTESPRRGGTD-----PTEP----------------------MYPG
Mflv_2547|M.gilvum_PYR-GCK --MGMKDSPGHGRNE---WGERDS----------------------GYSG
Mvan_4096|M.vanbaalenii_PYR-1 --MGMTDSPSRGREERSGLGGREEQSGLGGREEQSGLGGRGEQSGWGYPG
Mb2535|M.bovis_AF2122/97 --MNDPRRPQRFGPPLSGYGPTGPQ-------------------VPPNPP
Rv2507|M.tuberculosis_H37Rv --MNDPRRPQRFGPPLSGYGPTGPQ-------------------VPPNPP
MMAR_3854|M.marinum_M --MNDPRRPLRYGPPQPGPGPGWPQ-------------------GPVNTP
MUL_3786|M.ulcerans_Agy99 --MNDPRRPLRYGPPQPGPGPGWPQ-------------------GPVNTP
MLBr_00431|M.leprae_Br4923 --MNNPRRSEWLGPSLAGSGPIEPQ-------------------VHQYPP
MAV_1668|M.avium_104 MDMNDSRPTERFSPPQ-----------------------------PRYSP
MAB_1539c|M.abscessus_ATCC_199 --MDSNRRDDAAAPGGSTSYGSWPQ----------------------SSQ
.
MSMEG_4720|M.smegmatis_MC2_155 YPVEYPDPAYANQTPYGGGYPAAPNPVSNPP-------------ANPQPT
TH_1385|M.thermoresistible__bu ----YSDPAYASQA-YGPTYPASP---------------------QPPPT
Mflv_2547|M.gilvum_PYR-GCK ----YSDPAYASQTPYGPPYQ---------------------------PT
Mvan_4096|M.vanbaalenii_PYR-1 ----YSDPAYASQTPYAPPYQAPP---------------------GPRPT
Mb2535|M.bovis_AF2122/97 ----TADPAYADQSPYASTYGGYVSPPWSPGGPPPRPPQWPPGPHEASPT
Rv2507|M.tuberculosis_H37Rv ----TADPAYADQSPYASTYGGYVSPPWSPGGPPPRPPQWPPGPHEASPT
MMAR_3854|M.marinum_M ----PADPAYADQAPYAPTYGGHV-PQWAPG-----------SYDEANPT
MUL_3786|M.ulcerans_Agy99 ----PADPAYADQAPYAPTYGGHV-PQWARG-----------SYDEANPT
MLBr_00431|M.leprae_Br4923 ----LTDPAYAEQAPYAPAYGASL-PPWTPK----------------KPP
MAV_1668|M.avium_104 ----SVDPAYADQTPYAPTYGPTM-SPWAPA------------ANETNPT
MAB_1539c|M.abscessus_ATCC_199 PLDYPEDPAYASQAFEYPALSGTA---------------------QPNQT
*****.*: .
MSMEG_4720|M.smegmatis_MC2_155 QQMP-AYPPYGY----DPYASGQYGSGQYGGFPPAGPPP-EPEPEDREPR
TH_1385|M.thermoresistible__bu EQLP-AYPPYGY----DPYGTGQQG---Y-EYPPAEPP----EPEKPKLP
Mflv_2547|M.gilvum_PYR-GCK ERLP-AYPPYGYNPTADPNATGQYPP----QYPPHGPG--PEPPQDPKSP
Mvan_4096|M.vanbaalenii_PYR-1 ERLP-AYSPYGQ----DPYATGQYPP----QYPPQGYGSEPPPPEDPKSP
Mb2535|M.bovis_AF2122/97 QQLP-QYWQYDQ-----PPPG---------GFPPDGLT--PPPPQGPRTP
Rv2507|M.tuberculosis_H37Rv QQLP-QYWQYDQ-----PPPG---------GFPPDGLT--PPPPQGPRTP
MMAR_3854|M.marinum_M QQLPPQYWQQNP-----GQPG---------EVLRDG----PPPPEGPKTP
MUL_3786|M.ulcerans_Agy99 QQLPPQYWQQNP-----GQPG---------EVLRDG----PPPPEGPKTP
MLBr_00431|M.leprae_Br4923 QQLP-RYWQQDQ-----PPPT---------DIPPEGLT--LPPPHEPKSP
MAV_1668|M.avium_104 KQLP-AYWQQEL-----PPGG---------DPHTPG-M--APPPGEPKSP
MAB_1539c|M.abscessus_ATCC_199 AVLPQQYGQQYG------------------SYGPAPKD---PEPPRRSNT
:* * *
MSMEG_4720|M.smegmatis_MC2_155 MW-LWVLAALAVLVVVGLVIALVIANGSRQE-TVVAP-PVSPQPSF----
TH_1385|M.thermoresistible__bu GW-LWVLAALAVLLVVGLVIALVITNSSQQD-TVFAPGPSATEPSFPMP-
Mflv_2547|M.gilvum_PYR-GCK RW-LWIVAGVAVVMVIGLVIALVIVNSSRQE-TVVAPLPAAPEPSMTTSS
Mvan_4096|M.vanbaalenii_PYR-1 RW-LWIVAGLAVLTVIGLVIALVIVNSSRQQPVAITPLPSAPEPSYPTP-
Mb2535|M.bovis_AF2122/97 RW-LWFAAGSAVLLVVALVIALVIANGSVKKQTAIEPLPPMPGPSPTRP-
Rv2507|M.tuberculosis_H37Rv RW-LWFAAGSAVLLVVALVIALVIANGSVKKQTAIEPLPPMPGPSPTRP-
MMAR_3854|M.marinum_M RW-LWIAAGAAVVLVIGLVIALVIANISVKNQTALEPLPPIAGPSSTIA-
MUL_3786|M.ulcerans_Agy99 RW-LWIAAGAAVVLVIGLVIALVIANISVKNQTALEPLPPIAGPSSTIA-
MLBr_00431|M.leprae_Br4923 HWFLWVVAGASVVLVVGLVMALIIANGAIKTQTAVPPLPAITESSSATP-
MAV_1668|M.avium_104 RW-LWIAAGAAVLLVVALVIALVLANDAIKTQTAVPPLPAMPEPSPETP-
MAB_1539c|M.abscessus_ATCC_199 FW-LWVVGIGALVVIIALIITLVLLIQREDQ----QPPTVVSSPTTRTS-
* **. . ::: ::.*:::*:: . * . . .:
MSMEG_4720|M.smegmatis_MC2_155 -SEPTTTAPSP----SRTPRPVPVP-----PRTSAPTSPTTPGATETVVY
TH_1385|M.thermoresistible__bu -TPPTTTRRAP----TTVLPPLPSPGPTTGPTTGPPGATTTPGATETVVY
Mflv_2547|M.gilvum_PYR-GCK PRSPTTTSRAPRTTTRPTTPLLPLPTLPS---TTP--DPTTPGATDSVIY
Mvan_4096|M.vanbaalenii_PYR-1 --APTTTSRPP---TRPSTPVLPAPTLPSAPRTTPPTEPTVPGATDAVVY
Mb2535|M.bovis_AF2122/97 ---TTTTPTPP--------SPSAAPAPTTTTG--TPSET-VAGAMQTVVY
Rv2507|M.tuberculosis_H37Rv ---TTTTPTPP--------SPSAAPAPTTTTG--TPSET-VAGAMQTVVY
MMAR_3854|M.marinum_M ---PPTTRTSP--------TPSSSPAPTTTSGSATPTTTPTAGAMQTVVY
MUL_3786|M.ulcerans_Agy99 ---PPTTRTSP--------TPSSSPAPTTTSGSATPTTTPTAGAMQTVVY
MLBr_00431|M.leprae_Br4923 ---TPTTKTSP--------TPTAGPAPSTTGSG-TLTQTIGPSAMLDVVY
MAV_1668|M.avium_104 ---TTSTHRSP--------SLIPAPIPPTSEPE-PPTATTGPAAMQDVVY
MAB_1539c|M.abscessus_ATCC_199 ---TTTAPSQP--------TIPPIPSFTIPPIPVNPPTQGSQAATESVVY
..:: * . * .* *:*
MSMEG_4720|M.smegmatis_MC2_155 EVAGEGRAINITYLDTGGMLQTEFNVLLPWSKQVELPEPAKETASVSVLN
TH_1385|M.thermoresistible__bu EVAGTGRAINITYIDTGKVLQTEFNVQLPWRKQVELPSPAASSASVSIIN
Mflv_2547|M.gilvum_PYR-GCK TVEGLGRAINLTYVDTGGLLQTEFNVMLPWTKEVALPRPGESSASITIIN
Mvan_4096|M.vanbaalenii_PYR-1 TVDGNGRAINITYVDTGGLLQTEFNVMLPWSKEVSLPAPGEGSASISIIN
Mb2535|M.bovis_AF2122/97 DVTGEGRAISITYMDSGNVIQTEFNVALPWRKEVSLSKSSLHPASVTIVN
Rv2507|M.tuberculosis_H37Rv DVTGEGRAISITYMDSGNVIQTEFNVALPWRKEVSLSKSSLHPASVTIVN
MMAR_3854|M.marinum_M TVTGEGRAISVTYMDTGDVIQTEFNVALPWSKEVSLSRSANHPASVTIVN
MUL_3786|M.ulcerans_Agy99 TVTGEGRAISVTYMDTGDVIQTEFNVALPWNREVSLSRSANHPASVTIVN
MLBr_00431|M.leprae_Br4923 SITGQGRAISVTYMDTGDVIQTEFNVVLPWSKQVSLSKSAVHPASVTIVN
MAV_1668|M.avium_104 TVSGEGRAISIMYIDTGDLIQTEFNVALPWTKQVSLSKSAVHPANVTIVN
MAB_1539c|M.abscessus_ATCC_199 EVGGRGPALNVTYFDASGSLQMEFNVKLPWRKEVKLNTEQVTNAVVIAAD
: * * *:.: *.*:. :* **** *** ::* * * : :
MSMEG_4720|M.smegmatis_MC2_155 FGPEVSCTVTVDGVQTQHRTGSGLTICVGTMR
TH_1385|M.thermoresistible__bu VGRDVTCTVTVDGALIQQRTGSGLTICVGAG-
Mflv_2547|M.gilvum_PYR-GCK VGREVTCSITVNGTQRESRTGAGLTICAPTR-
Mvan_4096|M.vanbaalenii_PYR-1 VGREVTCSITVNGVQLDERTGAGLTICTSTG-
Mb2535|M.bovis_AF2122/97 IGHNVTCSVTVAGVQVRQRTGAGLTICDAPS-
Rv2507|M.tuberculosis_H37Rv IGHNVTCSVTVAGVQVRQRTGAGLTICDAPS-
MMAR_3854|M.marinum_M IGHNVTCSVTVSGVQVRQRTGVGLTICDASG-
MUL_3786|M.ulcerans_Agy99 IGHNVTCSVTVSGVQVRQRTGVGLTICDASG-
MLBr_00431|M.leprae_Br4923 IGHDVTCSVTVAGVQIRQHTGVGLTICDAPR-
MAV_1668|M.avium_104 IGHSVTCTVTVNGVQVSRRVGGGLTICDARG-
MAB_1539c|M.abscessus_ATCC_199 FSHDVSCTLLVNGAQKSATSGK-MATCSTLG-
.. .*:*:: * *. * :: *