For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TPEQMLDVAVEEARKGLSEGGIPIGAALFSADGELLGSGHNRRVQDGDPSIHAETDAFRAAGRQRGYRKT IMVTTLSPCWYCSGLVRQFNIGALVIGEARTFSGGHEWLADNGVSVTLLDDERCVTMMQDFITANPDLWA EDIGE*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_4687 | - | - | 100% (146) | cytosine deaminase |
M. smegmatis MC2 155 | MSMEG_6327 | - | 7e-11 | 34.78% (115) | cytidine and deoxycytidylate deaminase family protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3778c | - | 5e-08 | 34.41% (93) | cytidine/deoxycytidylate deaminase |
M. gilvum PYR-GCK | Mflv_2579 | - | 1e-69 | 81.51% (146) | CMP/dCMP deaminase, zinc-binding |
M. tuberculosis H37Rv | Rv3752c | - | 5e-08 | 34.41% (93) | cytidine/deoxycytidylate deaminase |
M. leprae Br4923 | MLBr_02474 | - | 2e-09 | 34.21% (114) | putative cytidine/deoxycytidylate deaminase |
M. abscessus ATCC 19977 | MAB_0268 | - | 4e-11 | 33.93% (112) | cytidine/deoxycytidylate deaminase family protein |
M. marinum M | MMAR_5295 | - | 1e-09 | 37.63% (93) | cytidine/deoxycytidylate deaminase |
M. avium 104 | MAV_0324 | - | 2e-08 | 36.56% (93) | cytidine and deoxycytidylate deaminase family protein |
M. thermoresistible (build 8) | TH_1653 | - | 9e-12 | 35.65% (115) | POSSIBLE CYTIDINE/DEOXYCYTIDYLATE DEAMINASE |
M. ulcerans Agy99 | MUL_4370 | - | 5e-10 | 37.63% (93) | cytidine/deoxycytidylate deaminase |
M. vanbaalenii PYR-1 | Mvan_4055 | - | 5e-74 | 86.90% (145) | CMP/dCMP deaminase, zinc-binding |
CLUSTAL 2.0.9 multiple sequence alignment Mb3778c|M.bovis_AF2122/97 -----------------MTTDEDLIRAALAVAATAGPRD-VPVGAVVVGA Rv3752c|M.tuberculosis_H37Rv -----------------MTTDEDLIRAALAVAATAGPRD-VPVGAVVVGA MLBr_02474|M.leprae_Br4923 ----MPSAAGRRHQTRSVTTDEDLIRAALTVATTAGSRD-VPIGAVVLGA MAV_0324|M.avium_104 -----------------MISDEDLIRSALAVAATAGPRD-VPIGAVVVGA MMAR_5295|M.marinum_M -----------------MIADEDLVRAALAAAATAGPRD-VPIGAVVISA MUL_4370|M.ulcerans_Agy99 -----------------MIADEDLVRAALAAAATAGPRD-VPIGAVMISA TH_1653|M.thermoresistible__bu --------------MIGSVTDEDMIRAALTAAREAGPRD-VPIGAVVFGP MAB_0268|M.abscessus_ATCC_1997 ---------------MTFPDDEALIRAALVAAREAGSQD-VPIGAVIYAA Mflv_2579|M.gilvum_PYR-GCK ------------------MTASQMLDVAVEEARKGLAEGGIPIGAALFAA Mvan_4055|M.vanbaalenii_PYR-1 MIRILGGVSLQDHRREGVATPQEMLEVAVEEARKGLAEGGIPIGAALFST MSMEG_4687|M.smegmatis_MC2_155 ------------------MTPEQMLDVAVEEARKGLSEGGIPIGAALFSA . :: *: * . ... :*:**.: .. Mb3778c|M.bovis_AF2122/97 DGTELARAVNAREALGDPTAHAEILAMRLAAGVLGDGWRLEGTTLAVTVE Rv3752c|M.tuberculosis_H37Rv DGTELARAVNAREALGDPTAHAEILAMRLAAGVLGDGWRLEGTTLAVTVE MLBr_02474|M.leprae_Br4923 DGNELARAVNAREAIGDPTAHAEILAMRAAAGTLGNGWRLEGTTLAVTVE MAV_0324|M.avium_104 DGTELARAVNAREALGDPTAHAEILALRAAAAALGDGWRLEGATLAVTVE MMAR_5295|M.marinum_M DGTELARAVNAREELGDPTAHAEILALRAAARVLGDGWRLEGATLAVTVE MUL_4370|M.ulcerans_Agy99 DGTELARAVNAREELGDPTAHAEILALRAAARVLGDGWRLEGATLAVTVE TH_1653|M.thermoresistible__bu DGGELARAANAREQLGDPTAHAEVLALRAAARRLGDGWRLEGATLAVTVE MAB_0268|M.abscessus_ATCC_1997 DGTELARAANARERLGDPTAHAEVLALRAAAAKHGDGWRLEGATLAVTVE Mflv_2579|M.gilvum_PYR-GCK DGTLLGSGHNRRVQLDDPSLHAETDAFRNAGRQRG----YRSTTMVTTLS Mvan_4055|M.vanbaalenii_PYR-1 DGALLGSGHNRRVQLGDPSVHAETDAFRNAGRQRG----YRSTIMVTTLS MSMEG_4687|M.smegmatis_MC2_155 DGELLGSGHNRRVQDGDPSIHAETDAFRAAGRQRG----YRKTIMVTTLS ** *. . * * .**: *** *:* *. * . : :..*:. Mb3778c|M.bovis_AF2122/97 PCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEVRGG Rv3752c|M.tuberculosis_H37Rv PCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEVRGG MLBr_02474|M.leprae_Br4923 PCTMCAGALVLARIERLVFGAWQPKTGAVGSLWDVVRDHRLNHRPAVRGG MAV_0324|M.avium_104 PCTMCAGALVLARIARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEVRGG MMAR_5295|M.marinum_M PCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPQVRGG MUL_4370|M.ulcerans_Agy99 PCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPQVRGG TH_1653|M.thermoresistible__bu PCTMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEVRGG MAB_0268|M.abscessus_ATCC_1997 PCTMCAGALVLARVGRVVFGAWEPKTGAVGSLWDVVRDRRQAHRPEVRGG Mflv_2579|M.gilvum_PYR-GCK PCWYCSGLVRQFNIGTVVIGESRTFTG--GHDWLAEHGVKVTVVDDERCV Mvan_4055|M.vanbaalenii_PYR-1 PCWYCSGLVRQFNIGAVVIGESRTFTG--GHDWLADNGVDVTIVDDERCV MSMEG_4687|M.smegmatis_MC2_155 PCWYCSGLVRQFNIGALVIGEARTFSG--GHEWLADNGVSVTLLDDERCV ** *:* : .: :*:* .. :* * * . .. * Mb3778c|M.bovis_AF2122/97 VLARECAAPLEAFFARQRLG------- Rv3752c|M.tuberculosis_H37Rv VLARECAAPLEAFFARQRLG------- MLBr_02474|M.leprae_Br4923 VLAQECTAPLEAFFAHQRLSKGPPVR- MAV_0324|M.avium_104 VLERECAALLEGFFARQRLG------- MMAR_5295|M.marinum_M VLAQECAAPLEEFFGRQRLG------- MUL_4370|M.ulcerans_Agy99 VLAQECAAPLEEFFGRQRLG------- TH_1653|M.thermoresistible__bu VLAAECAAPLEEFFARQRDPDSPRGLG MAB_0268|M.abscessus_ATCC_1997 VLEHECAALLERFFAAKR--------- Mflv_2579|M.gilvum_PYR-GCK TLMRDFIAGNPELWAEDIGE------- Mvan_4055|M.vanbaalenii_PYR-1 TMMRDFIAANPDLWAEDIGE------- MSMEG_4687|M.smegmatis_MC2_155 TMMQDFITANPDLWAEDIGE------- .: : : ::. .