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VPPDVQDALDTMATINNEFYYWVSIALMFLIHAGFLAYEVGASRSKNVLATAMKNLLALATIIASFYFVG WFLYNAMPSGFIEFNEAAKAALPWGDNMGPNVQDSASGIFWGAFALFAATTGSIMSGAVLERIRTSGFLI LTVLVGSVTWIIGAAWGWHGAGWMLTKLGFHDVGAAGCVHMIAGFATLGVLINLGPRIGRFLPDGTPVTI RPHNLPLTMLGLMLIFTGFFGFLMGCIIYAGDGLTTIYASPTTMSAFAFNTLMGLGGGIIGAYLTSKGEP FWTISGGLCGVIGVAAGMDLYHPTLAFVIAFGAGAVAPFIGRLLEKFKIDDVVGAVSVHGGIGLYSLLMS GIFLHGYPNTGGNPSISLWGQAIGAAVFAALGFIPTYVVSLGLKKVGLLRIPKEVEEQGLDLTEVPATPY PEGIPVTAMPVNGNGHAKTNGKLVTTAEV
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_4635 | - | - | 100% (449) | ammonium transporter family protein |
| M. smegmatis MC2 155 | MSMEG_6259 | amt | 6e-25 | 28.03% (314) | ammonium transporter |
| M. smegmatis MC2 155 | MSMEG_2425 | amt | 4e-20 | 25.23% (440) | ammonium transporter |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2944c | amt | 1e-23 | 26.27% (434) | ammonium transporter |
| M. gilvum PYR-GCK | Mflv_2626 | - | 0.0 | 83.61% (427) | Rh family protein/ammonium transporter |
| M. tuberculosis H37Rv | Rv2920c | amt | 1e-23 | 26.27% (434) | ammonium transporter |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_3240c | - | 9e-24 | 27.61% (431) | ammonium transporter |
| M. marinum M | MMAR_0038 | amt_1 | 5e-32 | 26.42% (424) | ammonium-transport integral membrane protein, Amt_1 |
| M. avium 104 | MAV_3084 | amt | 4e-30 | 25.72% (416) | ammonium transporter |
| M. thermoresistible (build 8) | TH_4321 | - | 1e-22 | 26.20% (439) | PUTATIVE ammonium transporter |
| M. ulcerans Agy99 | MUL_0037 | amt_1 | 2e-31 | 26.42% (424) | ammonium-transport integral membrane protein, Amt_1 |
| M. vanbaalenii PYR-1 | Mvan_3955 | - | 0.0 | 80.98% (447) | Rh family protein/ammonium transporter |
CLUSTAL 2.0.9 multiple sequence alignment
Mb2944c|M.bovis_AF2122/97 -MDQFP--IMGVPDGGDTAWMLVSSALVLLMTPGLAFFYGGMVRSKSVLN
Rv2920c|M.tuberculosis_H37Rv -MDQFP--IMGVPDGGDTAWMLVSSALVLLMTPGLAFFYGGMVRSKSVLN
MAB_3240c|M.abscessus_ATCC_199 ---------MGVPNTGDTAWMLASAALVLLMTPGLAFFYGGMVRAKNVLN
TH_4321|M.thermoresistible__bu VVLALPDESFAAFDSGDTAWVLISAALVLLMTPGLAFFYGGLSRQKSVLN
MMAR_0038|M.marinum_M ----------MDIDPAATAWLLASTALVLLMTPGLAIFYGGMVRTTGVLN
MUL_0037|M.ulcerans_Agy99 ----------MDIDPAATAWLLASTALVLLMTPGLAIFYGGMVRTTGVLN
MAV_3084|M.avium_104 ---------MHGIDPAATAWLLASTALVLLMTPGLAIFYGGMVRTTGVLN
Mflv_2626|M.gilvum_PYR-GCK MTPEVEDALSTMASVNNEFFYWMSIALMMLIHAGFLAYEIGASRSKNVLA
Mvan_3955|M.vanbaalenii_PYR-1 MTPEVEDAIASMTAVNNEFFYWMSIALMMLIHAGFLAYEIGASRSKNVLA
MSMEG_4635|M.smegmatis_MC2_155 MPPDVQDALDTMATINNEFYYWVSIALMFLIHAGFLAYEVGASRSKNVLA
: * **::*: .*: : * * ..**
Mb2944c|M.bovis_AF2122/97 MIMMSISAMGVVTVLWALYGYSIAFG------DDVGNIAGNPSQYWGLKG
Rv2920c|M.tuberculosis_H37Rv MIMMSISAMGVVTVLWALYGYSIAFG------DDVGNIAGNPSQYWGLKG
MAB_3240c|M.abscessus_ATCC_199 MIMMSISAMGLVTVLWVLYGYSMAFG------NDVSGLFGNPAQFLGLKG
TH_4321|M.thermoresistible__bu MMMMSFGALGIVSVVYVLWGYSMSFSSGHTGQSDILGVFDNPFSLFGLSP
MMAR_0038|M.marinum_M MIMMSFISIPLVTVAWLLAGYSLAFSDG-----AAPGFPGGLVGGLTHAG
MUL_0037|M.ulcerans_Agy99 MIMMSFISIPLVTVAWLLAGYSLAFSDG-----AAPGLPGGLVGGLTHAG
MAV_3084|M.avium_104 MIMMSFISIPLVTVAWLLVGYTMAFSQ--------DGMSG-LVGNLRHFG
Mflv_2626|M.gilvum_PYR-GCK TAMKNLLAFATIVASFFFVGWFLYNSMP----SGFIEFNDAAKAALPWSD
Mvan_3955|M.vanbaalenii_PYR-1 TAMKNLLAFATIVASFFFVGWFLYNAMP----TGFIEFSDAAKAALPWSD
MSMEG_4635|M.smegmatis_MC2_155 TAMKNLLALATIIASFYFVGWFLYNAMP----SGFIEFNEAAKAALPWGD
* .: :: : . : : *: : . .
Mb2944c|M.bovis_AF2122/97 LIG---VNAVAADPST---QTAAVNIPLAGTLPATVFVAFQLMFAIITVA
Rv2920c|M.tuberculosis_H37Rv LIG---VNAVAADPST---QTAAVNIPLAGTLPATVFVAFQLMFAIITVA
MAB_3240c|M.abscessus_ATCC_199 LIGGNAAEAVVADPANGVEAAEVVNIPLVGTLPATVFVAFQLMFAIITVA
TH_4321|M.thermoresistible__bu LLE-----TREIDGAT------LSVIGGFGTVPAIVWVGFQLTFAVITVA
MMAR_0038|M.marinum_M MRG--------IGPAT-----------VHGSVPELLFATFQLSFAIITAA
MUL_0037|M.ulcerans_Agy99 MRG--------IGPAT-----------VHGSVPELLFATFQLSFAIITAA
MAV_3084|M.avium_104 MLG--------ITPDT-----------THGAVPELLYATFQLTFAIITAA
Mflv_2626|M.gilvum_PYR-GCK NMG----------PNT------------DDPASGIFWGAFAL-FAATTGS
Mvan_3955|M.vanbaalenii_PYR-1 NMG----------PNT------------ADAASGIFWGAFAL-FAATTGS
MSMEG_4635|M.smegmatis_MC2_155 NMG----------PNV------------QDSASGIFWGAFAL-FAATTGS
.. . .: * * ** * :
Mb2944c|M.bovis_AF2122/97 LISGAVADRLKFGAWLLFAGLWATFVYFPVAHWVF-------AFDGFAAE
Rv2920c|M.tuberculosis_H37Rv LISGAVADRLKFGAWLLFAGLWATFVYFPVAHWVF-------AFDGFAAE
MAB_3240c|M.abscessus_ATCC_199 LISGAVADRLKFGSWLLFAGLWVTVVYFPVAHWVF-------AFDGAAAE
TH_4321|M.thermoresistible__bu LISGALAERVRFGTWIVFAAVWVTLVYFPLAHMVWGGGLLSDAQNGFASW
MMAR_0038|M.marinum_M LVSGAIADRAKFAAWMVFVPVWSIAVYSVVAHWVWS--------------
MUL_0037|M.ulcerans_Agy99 LVSGAIADRAKFAAWMVFVPVWSIAVYSVVAHWVWA--------------
MAV_3084|M.avium_104 LVSGAIADRAKFAAWMVFVPVWTVAVYSVVAHWVWG--------------
Mflv_2626|M.gilvum_PYR-GCK IMSGAVLERIRTSGFLVLTVFVGSVVWIIGASWGWHG-------------
Mvan_3955|M.vanbaalenii_PYR-1 IMSGAVLERIRTSGFLILTVFVGSVLWIIGASWGWHG-------------
MSMEG_4635|M.smegmatis_MC2_155 IMSGAVLERIRTSGFLILTVLVGSVTWIIGAAWGWHG-------------
::***: :* : . ::::. . : * :
Mb2944c|M.bovis_AF2122/97 HGGWIAN----KLHAIDFAGGTAVHINAGVAALMLAIVLGKRRG-----W
Rv2920c|M.tuberculosis_H37Rv HGGWIAN----KLHAIDFAGGTAVHINAGVAALMLAIVLGKRRG-----W
MAB_3240c|M.abscessus_ATCC_199 KGGWIAN----QLKAIDFAGGTAVHINAGTAGLVLALILGKRKG-----W
TH_4321|M.thermoresistible__bu LFGFNEDEGAANVAPIDFAGGTVVHINAGMAALMLALVVGRRLG-----F
MMAR_0038|M.marinum_M PSGWLAK-----MGVLDYAGGLVVEIVSGSSALALALVLGPRIG-----F
MUL_0037|M.ulcerans_Agy99 PSGWLAK-----MGVLDYAGGLVVEIVSGSSARALAPVLGPRIG-----F
MAV_3084|M.avium_104 PGGWLAR-----LGVLDYAGGLVVEIVSGSSALALALVLGPRIG-----F
Mflv_2626|M.gilvum_PYR-GCK -AGWMLT----ELGFHDVGAAGCVHMIAGFAALGILINLGPRIGRFLPDG
Mvan_3955|M.vanbaalenii_PYR-1 -AGWMLT----KLGFHDVGAAGCVHMIAGFATLGILINLGPRIGRFLPDG
MSMEG_4635|M.smegmatis_MC2_155 -AGWMLT----KLGFHDVGAAGCVHMIAGFATLGVLINLGPRIGRFLPDG
*: : * ... *.: :* : : :* * *
Mb2944c|M.bovis_AF2122/97 PATLFRPHNLPFVMLGAALLWFGWYGFNAGSATTANGVAGATFVTTTIAT
Rv2920c|M.tuberculosis_H37Rv PATLFRPHNLPFVMLGAALLWFGWYGFNAGSATTANGVAGATFVTTTIAT
MAB_3240c|M.abscessus_ATCC_199 PGTPMRPHNLPFVMLGAGLLWFGWYGFNAGSATSANGLAGSTFVTTTVAT
TH_4321|M.thermoresistible__bu GRTAYRPHNIPWVMLGAALLWFGWFGFNVGSEGAADAVAGLVWVNTTAAT
MMAR_0038|M.marinum_M KVDPMRPHNLPFVLLGVGLLWFGWFGFNAGSALAANGLASAIFLNTLVAG
MUL_0037|M.ulcerans_Agy99 KVDPMRPHNLPFVLLGVGLLWFGWFGFNAGSALAANGLASAIFLNTLVAG
MAV_3084|M.avium_104 KKDAMRPHNLPLLFVGVGLLWFGWFGFNAGSALAANGTAAAIFLNTLVAG
Mflv_2626|M.gilvum_PYR-GCK TAVTIRPHNLPLTMVGLFLIFTGFFGFLMGCVIYGPGGYATIYGSPTTLS
Mvan_3955|M.vanbaalenii_PYR-1 TAVTIRPHNLPLTMLGLFLIFTGFFGFLMGCVIYGATGYSTIYGSPTTLS
MSMEG_4635|M.smegmatis_MC2_155 TPVTIRPHNLPLTMLGLMLIFTGFFGFLMGCIIYAGDGLTTIYASPTTMS
****:* ::* *:: *::** *. . : ..
Mb2944c|M.bovis_AF2122/97 AAAMLGWL-----LTERVRDGKATTLGAASGIVAGLVAITPSCSSVNVLG
Rv2920c|M.tuberculosis_H37Rv AAAMLGWL-----LTERVRDGKATTLGAASGIVAGLVAITPSCSSVNVLG
MAB_3240c|M.abscessus_ATCC_199 AAAMLGWL-----LTERIRDGHATSLGAASGIVAGLVAITPSCSSVNVLG
TH_4321|M.thermoresistible__bu AAAMLGWL-----IVERIRDGRPTSVGAASGIVAGLVAITPACGALSPVG
MMAR_0038|M.marinum_M CLGMLGWL-----SVEQIRDGKPTTFGAASGVVAGLVAITPSCGTVNTLG
MUL_0037|M.ulcerans_Agy99 CLGMLGWL-----AVEQIRDGKPTTFGAASGVVAGLVAITPSCGTVNPLG
MAV_3084|M.avium_104 CLGMLGWL-----SVEQIRDGRPTTFGAASGVVAGLVAITPSCGTVNTLG
Mflv_2626|M.gilvum_PYR-GCK AFAFNTLMGLAGGIIGAYLTSRGEPFWTISGGLAGVIAVAAGMDLYHPAL
Mvan_3955|M.vanbaalenii_PYR-1 AFAFNTLMGMVGGIIGAYVMSRGEPFWTISGGLAGVIAIAAGMDLYHPAL
MSMEG_4635|M.smegmatis_MC2_155 AFAFNTLMGLGGGIIGAYLTSKGEPFWTISGGLCGVIGVAAGMDLYHPTL
. .: : .: .. : ** :.*::.::.. .
Mb2944c|M.bovis_AF2122/97 ALAVGVSAGVLCALAVGLKFKLGFDDSLDVVGVHLVGGLVGTLLVGLLAA
Rv2920c|M.tuberculosis_H37Rv ALAVGVSAGVLCALAVGLKFKLGFDDSLDVVGVHLVGGLVGTLLVGLLAA
MAB_3240c|M.abscessus_ATCC_199 ALAIGAIAGILCALAVGLKYRLGFDDSLDVVGVHLVGGIVGTLLIGLFAA
TH_4321|M.thermoresistible__bu SLFLGVIAGALSALAVGLKYRFGYDDSLDVVGVHLVAGLWGTIGIGFFA-
MMAR_0038|M.marinum_M AALVGLAAGIVCAFAITVKFKLNYDDSLDVVGVHFIGGVVGVLLIGLLAT
MUL_0037|M.ulcerans_Agy99 AALIGLAAGIVCAFAITVKFKLNYDDSLDVVGVHFIGGVVGVLLIGLLAT
MAV_3084|M.avium_104 ATVVGLAAGVVCSFAVGAKLRFNYDDSLDVVGVHFVGGVVGVSLIGLFAT
Mflv_2626|M.gilvum_PYR-GCK TFVIALVGGGLIPFIGKLLDKMKIDDVVGAVAVHGGMGFYSLIMAGIFLA
Mvan_3955|M.vanbaalenii_PYR-1 TFVIALVGGGLIPFIGKLLDKMKIDDVVGAVAVHGGMGLYSVIVAGIFLA
MSMEG_4635|M.smegmatis_MC2_155 AFVIAFGAGAVAPFIGRLLEKFKIDDVVGAVSVHGGIGLYSLLMSGIFLH
: :. .* : .: :: ** :..*.** *. . *::
Mb2944c|M.bovis_AF2122/97 PEAPAINGVAGVSKGLFYGGGFAQLERQALGACSVLVYSGIITLILALIL
Rv2920c|M.tuberculosis_H37Rv PEAPAINGVAGVSKGLFYGGGFAQLERQALGACSVLVYSGIITLILALIL
MAB_3240c|M.abscessus_ATCC_199 PET------GAAVAGLFYGGGLEQLWRQAVGAGAVLLYSAIGTAIVAFIV
TH_4321|M.thermoresistible__bu -----------TETGLLYGGGIQQLIVQIVIAVVAMAFTAVMTLVIATVL
MMAR_0038|M.marinum_M AVMT------DGARGLFYGGGLGQLGKQALAMVVVALYAFTVSYLLAALI
MUL_0037|M.ulcerans_Agy99 AVMT------DGARGLFYGGGLGQLGKQALAMVVVGLYAFTVSYLLAALI
MAV_3084|M.avium_104 AVMT------AGPQGLFYGGGVAQLGKQALAIAAVALYAFTVSFLLAKAI
Mflv_2626|M.gilvum_PYR-GCK GYPN------------TDGNPSISFWGQLIGAVTFAALGFLPAYLLSLGL
Mvan_3955|M.vanbaalenii_PYR-1 GYPN------------IGGNPSISFWGQLIGAVVFAALGFIPAYLLSLLL
MSMEG_4635|M.smegmatis_MC2_155 GYPN------------TGGNPSISLWGQAIGAAVFAALGFIPTYVVSLGL
*. .: * : : ::: :
Mb2944c|M.bovis_AF2122/97 KFTIGLRLDAEQESTGIDEAEHAESGYDF-AVASGSVLPPRVTVEDSRNG
Rv2920c|M.tuberculosis_H37Rv KFTIGLRLDAEQESTGIDEAEHAESGYDF-AVASGSVLPPRVTVEDSRNG
MAB_3240c|M.abscessus_ATCC_199 KYTIGLRISDEGEAAGADESQHAEGAYDFVALGSGSVIGRHVSSGSSD--
TH_4321|M.thermoresistible__bu KP-LGWRVSEEDEEAGIDAAEHAETAYELV--------------------
MMAR_0038|M.marinum_M ERLMGFRVSREEEVSGVDLSQHAETAYTEGVYGHQQLHRPFSGGDAIRPR
MUL_0037|M.ulcerans_Agy99 ERLMGFRVSREEEVSGVDFSQHAETAYTEGVYGHQQLHRPFSGGDAIRPR
MAV_3084|M.avium_104 DRVMGFRVSAEDETTGVDLTQHAETAYAEGVHGHLPQRRPGPG-DRLK--
Mflv_2626|M.gilvum_PYR-GCK KKAGLLRIPPEVEEQGLDLSEVPATPYPEGIPVTEMRASSG-----TAVL
Mvan_3955|M.vanbaalenii_PYR-1 KKVGLLRIPAEVEEQGLDLSEVPATPYPEGIPVTAMKLNG-------SVL
MSMEG_4635|M.smegmatis_MC2_155 KKVGLLRIPKEVEEQGLDLTEVPATPYPEGIPVTAMPVNGNGHAKTNGKL
. *: * * * * :: . *
Mb2944c|M.bovis_AF2122/97 IQERIGQKVEAEPK
Rv2920c|M.tuberculosis_H37Rv IQERIGQKVEAEPK
MAB_3240c|M.abscessus_ATCC_199 --------------
TH_4321|M.thermoresistible__bu --------------
MMAR_0038|M.marinum_M PNIEDA--------
MUL_0037|M.ulcerans_Agy99 PNIEDA--------
MAV_3084|M.avium_104 --------------
Mflv_2626|M.gilvum_PYR-GCK VLGEEVK-------
Mvan_3955|M.vanbaalenii_PYR-1 VVTEEVN-------
MSMEG_4635|M.smegmatis_MC2_155 VTTAEV--------