For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TQREFDLVLYGATGFAGKLTAQYLAGAAGDARIALAGRSAEKLQAARDSIGGAAADWPLVIADADNPSTL ADMAARTRVVVTTVGPYTRYGLPLVAACAAAGTDYADLTGETMFIRDSIDRYHQQAVDTGARIVHSCGFD SVPSDLTVFALHRRATADGAGELVDTDLVLRSFAGGVSGGTAASMIEVLRTSSTDPAARAAMTDPYTLSP DRSREPELGDQPDVRWRRGSEIAPELAGYWTGAFAMAGPNTRIVRRSNALLDYAYGRRFAYAEQMSCGRS PAAPIAAALVTASNAATMGLGGRFFDKIPSGLLERVLPKPGTGPSEQTRERGHYRVETYTTTTSGARYVA TMAQQGDPGYKATAVLLGECGLALATDRDKLSGLHGVLTPAAAMGDALLTRLPAAGVVLETTKLD*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_4632 | - | - | 100% (416) | saccharopine dehydrogenase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2476c | - | 1e-166 | 69.81% (414) | hypothetical protein Mb2476c |
M. gilvum PYR-GCK | Mflv_2628 | - | 1e-177 | 73.85% (413) | saccharopine dehydrogenase |
M. tuberculosis H37Rv | Rv2449c | - | 1e-166 | 69.81% (414) | hypothetical protein Rv2449c |
M. leprae Br4923 | MLBr_00129 | - | 1e-146 | 63.29% (414) | hypothetical protein MLBr_00129 |
M. abscessus ATCC 19977 | MAB_4339c | - | 1e-149 | 66.51% (415) | hypothetical protein MAB_4339c |
M. marinum M | MMAR_3775 | - | 1e-172 | 72.22% (414) | hypothetical protein MMAR_3775 |
M. avium 104 | MAV_1723 | - | 1e-173 | 72.71% (414) | saccharopine dehydrogenase |
M. thermoresistible (build 8) | TH_0608 | - | 0.0 | 76.76% (413) | CONSERVED HYPOTHETICAL PROTEIN |
M. ulcerans Agy99 | MUL_3722 | - | 1e-172 | 71.74% (414) | hypothetical protein MUL_3722 |
M. vanbaalenii PYR-1 | Mvan_3953 | - | 1e-177 | 73.61% (413) | saccharopine dehydrogenase |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_2628|M.gilvum_PYR-GCK MDMSE-NDREHDIVLYGATGFVGKLTAQYLAS--AGTGARIALAGRSTDR Mvan_3953|M.vanbaalenii_PYR-1 MSANEAHDREHDIVVYGATGFVGKLTAQYLAA--AGAGARIALAGRSTDR TH_0608|M.thermoresistible__bu MTAAQ---REFDIVLYGATGFVGKLTARYLAS--AGVGARIALAGRSEQK MSMEG_4632|M.smegmatis_MC2_155 MTQ-----REFDLVLYGATGFAGKLTAQYLAG--AAGDARIALAGRSAEK Mb2476c|M.bovis_AF2122/97 MTATP---REFDIVLYGATGFVGKLTAEYLAR--AGGDARIALAGRSTQR Rv2449c|M.tuberculosis_H37Rv MTATP---REFDIVLYGATGFVGKLTAEYLAR--AGGDARIALAGRSTQR MAV_1723|M.avium_104 MTATP---REFDIVLYGATGFVGKLTAEYLAG--AAPDKRIALAGRSTEK MMAR_3775|M.marinum_M MSETP---REFDIILYGATGFVGKLTAQYLAR--AGGDARIALAGRSTDR MUL_3722|M.ulcerans_Agy99 MSETP---REFDIILYGATGFVGKLTAQYLAR--AGGDARIALAGRSTDR MAB_4339c|M.abscessus_ATCC_199 MS------REHDIVLYGATGYVGKLTALYLAGRVEATGARIALAGRSTEK MLBr_00129|M.leprae_Br4923 MSPDK---REFDIVLYGATGFSGKLTAEHLAL--SESTARIALAGRSSER * **.*:::*****: ***** :** ******** :: Mflv_2628|M.gilvum_PYR-GCK LLAVRDSLGEQAKDWPLIVADASQPSTINAMAASTRVVVTTVGPYLRYGL Mvan_3953|M.vanbaalenii_PYR-1 LLAVRESLGEAAQDWPLLVADASQPSTLNAMAASTRVVITTVGPYLRYGL TH_0608|M.thermoresistible__bu LAAVRESLGEAAASWPLLTADADQPATLDELASRTQVVVTTVGPYTKYGM MSMEG_4632|M.smegmatis_MC2_155 LQAARDSIGGAAADWPLVIADADNPSTLADMAARTRVVVTTVGPYTRYGL Mb2476c|M.bovis_AF2122/97 VLAVREALGESAQTWPILTADASLPSTLQAMAARAQVVVTTVGPYTRYGL Rv2449c|M.tuberculosis_H37Rv VLAVREALGESAQTWPILTADASLPSTLQAMAARAQVVVTTVGPYTRYGL MAV_1723|M.avium_104 LHAVRDSLGDAAQSWPVLQADASSPATLNEMAARTQVVITTVGPYTRYGL MMAR_3775|M.marinum_M LLAVRQTLGEAAQSWPVVSADAGAPATLKEMAARTRVVVTTVGPYMRYGL MUL_3722|M.ulcerans_Agy99 LLAVRQTLGEAAQSWPVVSADAGAPATLKEMAARTRVVVTTVGPYMRYGL MAB_4339c|M.abscessus_ATCC_199 LAAVRDACGPAARDWPLIEADTTRPATLAAMAASTQVVLTTVGPYTKYGL MLBr_00129|M.leprae_Br4923 LRNVRALLGPNAQDWPLIVADASQPSTLEAMAGRAQVVLTTVGPYTRYGL : .* * * **:: **: *:*: :*. ::**:****** :**: Mflv_2628|M.gilvum_PYR-GCK PLVAACAAAGTDYADLTGETLFVRRAIDLHHKQAVDTGARIVHACGFDSI Mvan_3953|M.vanbaalenii_PYR-1 PLVAACAAAGTDYADLTGETLFVRECIDLYHKQAADTGARIVHACGFDSI TH_0608|M.thermoresistible__bu PLVAACAVAGTDYADLTGETMFIRRAIDLYHKQAADNGARIVHSCGFDSI MSMEG_4632|M.smegmatis_MC2_155 PLVAACAAAGTDYADLTGETMFIRDSIDRYHQQAVDTGARIVHSCGFDSV Mb2476c|M.bovis_AF2122/97 PLVAACAAAGTDYADLTGEPMFMRNSIDLYHKQAADTGARIVHACGFDSV Rv2449c|M.tuberculosis_H37Rv PLVAACAAAGTDYADLTGEPMFMRNSIDLYHKQAADTGARIVHACGFDSV MAV_1723|M.avium_104 PLVAACAAAGTDYADLTGEAMFVRDSIDSYHKQAADTGARIVHACGFDSV MMAR_3775|M.marinum_M PLVAACAAAGTDYADLTGEPPFVRESIDLYHKQAADTGARIVHACGFDSI MUL_3722|M.ulcerans_Agy99 PLVAACAAAGTDYADLTGEPPFVRESIDLYHKQAADTGARIVHACGFDSI MAB_4339c|M.abscessus_ATCC_199 PLVAACAEAGTDYADLTGEVNFVRESIDVYGKQAADTGARIVHCCGFDSI MLBr_00129|M.leprae_Br4923 PLVAACARTGTDYADLTGELMFCRNSIDLHHKQAAATGARIILACGFDSV ******* :********** * * .** : :**. .****: .*****: Mflv_2628|M.gilvum_PYR-GCK PSDMTVFALYRQAERDGTGQLGDTNFVARSFAG-GVSGGTIASMTELARE Mvan_3953|M.vanbaalenii_PYR-1 PSDMTVFALYRAAERDRTGELGDTNFVVRSFAG-GVSGGTVASMTELARQ TH_0608|M.thermoresistible__bu PSDITVYALYRRAVEDGTGELGDTNLVVRRFAG-GVSGGTAASMLEVMRT MSMEG_4632|M.smegmatis_MC2_155 PSDLTVFALHRRATADGAGELVDTDLVLRSFAG-GVSGGTAASMIEVLRT Mb2476c|M.bovis_AF2122/97 PSDLSVYALYHAAREDGAGELTDTNCVVRSFKG-GFSGGTIASMLEVLST Rv2449c|M.tuberculosis_H37Rv PSDLSVYALYHAAREDGAGELTDTNCVVRSFKG-GFSGGTIASMLEVLST MAV_1723|M.avium_104 PSDLSVYALYRAARDDGAGELVDTDLVVRSFSG-GVSGGTVASMLEVLDT MMAR_3775|M.marinum_M PSDLTVYALYRAVRDDGAGELGRTDFVVRSFAG-GVSGGTVASMLEILRA MUL_3722|M.ulcerans_Agy99 PSDLTVYALYRAVRDDGAGELGRTDFVVRSFAG-GVSGGTVASMLEILRA MAB_4339c|M.abscessus_ATCC_199 PSDLSVYALYRRAQEDGTGELLDTTYVLSKFRG-GVSGGTAASMVEVMEA MLBr_00129|M.leprae_Br4923 PSDLNVYQLYRRVIEDRTGELCDTDLVLRSFSQRWVSGGSVAAYSEAMLT ***:.*: *:: . * :*:* * * * .***: *: * Mflv_2628|M.gilvum_PYR-GCK ASLDPEARRLLNDPYTLTPDRGAEPELGPQPDARWRRGREIAPELDGYWV Mvan_3953|M.vanbaalenii_PYR-1 ASQDPEARRLLNDPYTLTPDRAAEPELGAQPDARWRRGREIAPELDGYWV TH_0608|M.thermoresistible__bu ASEDPEARRLMTDPYTLSPDRAAEPELGGQPDIRWRRGGEIAPELEGYWT MSMEG_4632|M.smegmatis_MC2_155 SSTDPAARAAMTDPYTLSPDRSREPELGDQPDVRWRRGSEIAPELAGYWT Mb2476c|M.bovis_AF2122/97 ASNDPDARRQLSDPYMLSPDRGAEPELGPQPDLPSRRGRRLAPELAGVWT Rv2449c|M.tuberculosis_H37Rv ASNDPDARRQLSDPYMLSPDRGAEPELGPQPDLPSRRGRRLAPELAGVWT MAV_1723|M.avium_104 ASRDPEARRQLADPYTLSSDRGAEPDVGPQPDLPCRRGRQIAPELAGVWT MMAR_3775|M.marinum_M VSADPDLRRQFTDPYTLSTDRAAEPELGPQPDLPWRRGGRIAPELTGLWT MUL_3722|M.ulcerans_Agy99 VSAAPDLRRQFTDPYTLSTDRAAEPELGPQPDLPWRRGGRIAPELTGLWT MAB_4339c|M.abscessus_ATCC_199 SAEDPEVRRNAQDPYSLSPDRPAEPEVGRQREFQTLRGESVAPELTGKWL MLBr_00129|M.leprae_Br4923 TSNDPEALRLVTDPYTLTTDRDAEPDLGPQPDFPRHRGSDLAPELAGFWT : * *** *:.** **::* * : ** :**** * * Mflv_2628|M.gilvum_PYR-GCK GAFAMALPNTRVVRRSNALLDYAYGRRFEYAELMSTGRSIGAPVLAAVAT Mvan_3953|M.vanbaalenii_PYR-1 GAFAMALPNTRVVRRSNALLGYAYGRRFEYAEQMSTGRSVGAPLVAAMAT TH_0608|M.thermoresistible__bu GAFVMAVANTRIVRRTNALLDYAYGRRFEYAEQMSLGKSIAAPVAAALAT MSMEG_4632|M.smegmatis_MC2_155 GAFAMAGPNTRIVRRSNALLDYAYGRRFAYAEQMSCGRSPAAPIAAALVT Mb2476c|M.bovis_AF2122/97 AGFIMAPTNTRIVRRSNALLDWAYGRRFRYSETMSVGSTVLAPVVSVVGG Rv2449c|M.tuberculosis_H37Rv AGFIMAPTNTRIVRRSNALLDWAYGRRFRYSETMSVGSTVLAPVVSVVGG MAV_1723|M.avium_104 AGFVMAPYNTRIVRRSNALLDWAYGRSLRYSESMSLGSSPLAPVASAVVG MMAR_3775|M.marinum_M AGFMMAPTNTRIVRRSNALLDWAYGRRFQYTEHMSLGSSAVAPVASAMIS MUL_3722|M.ulcerans_Agy99 AGFMMAPTNTRIVRRSNALLDWAYGKRFQYTEHMSLGSSAVAPVASAMIS MAB_4339c|M.abscessus_ATCC_199 GAFFMGPVNTRIVRRSNALLDWAYGTRMRYREAMSLGSSVVAPVAAAAVT MLBr_00129|M.leprae_Br4923 GGFVQAQFNTRIVRRSNALQNWSYGRQFRYSETMSLGKSWAAPVASAAVT ..* . ***:***:*** .::** : * * ** * : **: :. Mflv_2628|M.gilvum_PYR-GCK AGNAATMQLGSRFLNRVPRAALERVLPKPGTGPNEQTRERGHYTVETYTT Mvan_3953|M.vanbaalenii_PYR-1 AGNVATMELSSRFLDRVPRGALERILPKVGTGPSEQTRERGHYTVETYTT TH_0608|M.thermoresistible__bu AGNAAAFGLGSRFFHRVPDRLIEKVMPKPGTGPSERTRERGHYTVETYTT MSMEG_4632|M.smegmatis_MC2_155 ASNAATMGLGGRFFDKIPSGLLERVLPKPGTGPSEQTRERGHYRVETYTT Mb2476c|M.bovis_AF2122/97 GVGNAMFGLASRYIRLLPRGLVKRVVPKPGTGPSAAARERGYYRIETYTT Rv2449c|M.tuberculosis_H37Rv GVGNAMFGLASRYIRLLPRGLVKRVVPKPGTGPSAAARERGYYRIETYTT MAV_1723|M.avium_104 GTAAATFGLGSRYFRFLPRRLVERIVPKPGTGPSPSARERGYYRIETYTT MMAR_3775|M.marinum_M GVGNAMTGLGSRYFRLLPQRLVERIAPKPGTGPSAATRERGYYRIETYTT MUL_3722|M.ulcerans_Agy99 GVGNAMTGLGSRYFRLLPQRLVERIAPKPGTGPSAATRERGYYRIETYTT MAB_4339c|M.abscessus_ATCC_199 GALTVGFGLGTRVP--LPKFIAQRVLPKPGTGPSERTRERGHYRVETYTT MLBr_00129|M.leprae_Br4923 SVVAGAVGLGNKYFNRLPRRVVERVTPKSGTGPSRKTQARGHYTFETYTT . *. : :* ::: ** ****. :: **:* .***** Mflv_2628|M.gilvum_PYR-GCK TSTGARYVARMSQNGDPGYKATAVLLGESGLALALDRDKLSDLRGILTPA Mvan_3953|M.vanbaalenii_PYR-1 TSTGARYLARMSQQGDPGYKATSVLLGESGLALALDRDKLSDLRGILTPA TH_0608|M.thermoresistible__bu TTTGARYVARMSQQGDPGYQATSVLLGESGLALALDRDKLSDLRGVLTPA MSMEG_4632|M.smegmatis_MC2_155 TTSGARYVATMAQQGDPGYKATAVLLGECGLALATDRDKLSGLHGVLTPA Mb2476c|M.bovis_AF2122/97 TTTGARYLARMAQDGDPGYKATSVLLGECGLALALDRDKLSDMRGVLTPA Rv2449c|M.tuberculosis_H37Rv TTTGARYLARMAQDGDPGYKATSVLLGECGLALALDRDKLSDMRGVLTPA MAV_1723|M.avium_104 TTSGARYVARMEQRGDPGYKATSVLLGESGLALAFDRDKLPQLYGVLTPA MMAR_3775|M.marinum_M TTSGDRYVARMEQGGDPGYKATSVLLGECGLALAFDRDQLSGLHGVLTPA MUL_3722|M.ulcerans_Agy99 TTSGDRYVARMEQDGDPGYKATSVLLGECGLALAFDRDQLSGLHGVLTPA MAB_4339c|M.abscessus_ATCC_199 TTEGVRYRAIIAQEGDPGYKATAVLLGESGLTLALDRTELPDRLGVLTPA MLBr_00129|M.leprae_Br4923 TTTGARYMATFAHNVD-AYKSTAGLLAASGLTLALDRDRLSELRGVLTPA *: * ** * : : * .*::*: **. .**:** ** .*. *:**** Mflv_2628|M.gilvum_PYR-GCK AAMGDALLARCPGA-DVSLDVSRLN- Mvan_3953|M.vanbaalenii_PYR-1 AAMGDALLARFPAA-GVSLDVSRLN- TH_0608|M.thermoresistible__bu AAMGDVLLTRLPAA-GVTLTVERLA- MSMEG_4632|M.smegmatis_MC2_155 AAMGDALLTRLPAA-GVVLETTKLD- Mb2476c|M.bovis_AF2122/97 AAMGDALLERLPAA-GVSLQTTRLAS Rv2449c|M.tuberculosis_H37Rv AAMGDALLERLPAA-GVSLQTTRLAS MAV_1723|M.avium_104 AAMGDALLDRFPGA-GVSLQVDRLAG MMAR_3775|M.marinum_M AAMGDALLARLPAA-GVALATERLT- MUL_3722|M.ulcerans_Agy99 AAMGDALLARLPAA-GVALATERLT- MAB_4339c|M.abscessus_ATCC_199 AAMGDPLLERLRAARGVTVEVERL-- MLBr_00129|M.leprae_Br4923 AAMGEALLTRLPSA-GVVIGTTRLS- ****: ** * .* .* : . :*