For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
RIRRLVMLRHGQTEYNAGSRMQGQLDTDLSDLGRDQAAAAAEVLAKRQPLLIVSSDLRRALDTAETLGTR AGVAVAVDKRLRETHLGDWQGLTHLEVDAAAPGARLAWRDDARWAPHGGESRVDVAERSLPLVVELVAQQ SEWGLDRPGAGAERPVVLVAHGGLIAALTAELLGLPVDNWPVLGGMGNASWVQLSGHSADDAEFADIRWR LDVWNASAQVANDVL*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_4579 | - | - | 100% (226) | phosphoglycerate mutase family protein |
M. smegmatis MC2 155 | MSMEG_4305 | - | 7e-18 | 42.06% (126) | bifunctional RNase H/acid phosphatase |
M. smegmatis MC2 155 | MSMEG_1926 | - | 2e-17 | 38.42% (177) | acid phosphatase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2442c | - | 4e-96 | 76.65% (227) | phosphoglycerate mutase (phosphoglyceromutase) |
M. gilvum PYR-GCK | Mflv_2655 | - | 1e-102 | 81.06% (227) | phosphoglycerate mutase |
M. tuberculosis H37Rv | Rv2419c | - | 1e-96 | 77.09% (227) | phosphoglycerate mutase (phosphoglyceromutase) |
M. leprae Br4923 | MLBr_01452 | - | 2e-87 | 71.05% (228) | putative phosphoglycerate mutase |
M. abscessus ATCC 19977 | MAB_1623 | - | 3e-93 | 77.23% (224) | phosphoglycerate mutase |
M. marinum M | MMAR_3747 | gpm_1 | 1e-95 | 77.09% (227) | phosphoglycerate mutase, Gpm_1 |
M. avium 104 | MAV_1752 | - | 3e-97 | 77.53% (227) | phosphoglycerate mutase family protein |
M. thermoresistible (build 8) | TH_0787 | - | 1e-102 | 79.49% (234) | PROBABLE PHOSPHOGLYCERATE MUTASE (PHOSPHOGLYCEROMUTASE) |
M. ulcerans Agy99 | MUL_3691 | gpm_1 | 7e-94 | 76.21% (227) | phosphoglycerate mutase, Gpm_1 |
M. vanbaalenii PYR-1 | Mvan_3924 | - | 1e-109 | 84.72% (229) | phosphoglycerate mutase |
CLUSTAL 2.0.9 multiple sequence alignment Mb2442c|M.bovis_AF2122/97 MRARRLVMLRHGQTDYNVGSRMQGQLDTELSELGRTQAVAAAEVLGKRQP Rv2419c|M.tuberculosis_H37Rv MRARRLVMLRHGQTDYNVGSRMQGQLDTELSELGRTQAVAAAEVLGKRQP MLBr_01452|M.leprae_Br4923 MRTRRLVMLRHGQTDFNLGGRMQGQLDTELSELGRAQAVAVAEVLGKLQP MAV_1752|M.avium_104 MKIRRLIMLRHGQTEFNAGSRMQGQLDSELSELGRAQAVAAAEVLGKAQP MMAR_3747|M.marinum_M MTVRRLVMLRHGQTDYNLGSRMQGQLDTDLSDLGRAQAVAAAEVLGKLQP MUL_3691|M.ulcerans_Agy99 MTVRRLVMLRHGQTDYNLGSRMQGQLDTDLSDLGRAQAVAAAEVLGKLQP Mflv_2655|M.gilvum_PYR-GCK MTIRRLVMLRHGQTEYNAGSRMQGQLDTDLSDLGREQAASAADALAKRHP Mvan_3924|M.vanbaalenii_PYR-1 MRVRRLVMLRHGQTEYNAGSRMQGQLDTDLSDLGREQAVAAAEVLAKRQP MSMEG_4579|M.smegmatis_MC2_155 MRIRRLVMLRHGQTEYNAGSRMQGQLDTDLSDLGRDQAAAAAEVLAKRQP TH_0787|M.thermoresistible__bu MRVRKLVMLRHGQTEYNAGSRMQGQLDTDLSDLGRAQAVAVAEVLSKRQP MAB_1623|M.abscessus_ATCC_1997 -MIRRLVLLRHGQTTFNADSRMQGQLDTGLSDLGRAQAVAAAEVLAKRLP *:*::****** :* ..*******: **:*** **.:.*:.*.* * Mb2442c|M.bovis_AF2122/97 LLIVSSDLRRAYDTAVKLGERTGLVVRVDTRLRETHLGDWQGLTHAQIDA Rv2419c|M.tuberculosis_H37Rv LLIVSSDLRRAYDTAVKLGERTGLVVRVDTRLRETHLGDWQGLTHAQIDA MLBr_01452|M.leprae_Br4923 LRIVSSDLRRAYDTAIKLGERTGLKIWVDDRLREAHLGDWQGLTHSQIDA MAV_1752|M.avium_104 LLIVSSDLHRAYDTAVRLGERTGLPIRVDRRLRETHLGDWQGLTHTQVDT MMAR_3747|M.marinum_M LLIVSSDLRRAYDTATRLGERTGQQVRVDPRLRETHLGDWQGLTHTQIDA MUL_3691|M.ulcerans_Agy99 LLIVSSDLRRAYDTATRLGERTGQQVRVDPRLRETHLGDWQGLTQTQIDA Mflv_2655|M.gilvum_PYR-GCK LLIVSSDLRRALDTAVVLGDRCGQPVSIDARLRETHLGDWQGMTHLEVDE Mvan_3924|M.vanbaalenii_PYR-1 LLIVSSDLRRALDTAVALGDRSGQPVSIDTRLRETHLGDWQGMTHLEVDA MSMEG_4579|M.smegmatis_MC2_155 LLIVSSDLRRALDTAETLGTRAGVAVAVDKRLRETHLGDWQGLTHLEVDA TH_0787|M.thermoresistible__bu LAIVSSDLRRAFDTAVELGDRSGLPVQVDPRLRETHLGEWQGLTHLEVDA MAB_1623|M.abscessus_ATCC_1997 LAIVSSDLQRAYDTATALADRCHVGVSVDERLRETHLGDWQGLTHHEVDA * ******:** *** *. * : :* ****:***:***:*: ::* Mb2442c|M.bovis_AF2122/97 DAPGARLAWREDATWAPHGGESRVDVAARSRPLVAELVASEPEWG---GA Rv2419c|M.tuberculosis_H37Rv DAPGARLAWREDATWAPHGGESRVDVAARSRPLVAELVASEPEWG---GA MLBr_01452|M.leprae_Br4923 DAPGARLAWREDATWAPHSGESRVDVAARSLPVVTEVVSGAPEWG---DC MAV_1752|M.avium_104 QAPGARLAWREDATWAPHGGESRVDVAARSVPVVAELVAGEPEWG---DP MMAR_3747|M.marinum_M EAPGARLAWRENAEWAPHGGESRIDVAARSVPLVTELVSAEPEWG---GP MUL_3691|M.ulcerans_Agy99 EAPGARLAWRENAEWAPHGGESRIDVAARSVPLVTELVSAEPEWG---GP Mflv_2655|M.gilvum_PYR-GCK VAPGARLAWRDDARWAPHGGESRIDVARRSLPLVRELVTQQTEWG----S Mvan_3924|M.vanbaalenii_PYR-1 AAPGARLAWRDDARWAPHGGESRVDVADRSLPLVHELVTQQTDWG----A MSMEG_4579|M.smegmatis_MC2_155 AAPGARLAWRDDARWAPHGGESRVDVAERSLPLVVELVAQQSEWGLDRPG TH_0787|M.thermoresistible__bu AAPGARLAWRDDARWAPHGGESRVDVAARSLPLVAELVAEHRDWG----A MAB_1623|M.abscessus_ATCC_1997 IAPGARAAWRDDATLAPHGGESRIDVANRSVPLVAELVDSVTEWG----T ***** ***::* ***.****:*** ** *:* *:* :** Mb2442c|M.bovis_AF2122/97 DEPDRPVVLVAHGGLIAVLSAALLKLPVANWPALGGMGNASWTQLSGHW- Rv2419c|M.tuberculosis_H37Rv DEPDRPVVLVAHGGLIAALSAALLKLPVANWPALGGMGNASWTQLSGHW- MLBr_01452|M.leprae_Br4923 HEPDRPVVLVAHGGLITALSAALLRLPVANWSILGSMGNASWVQLSGHS- MAV_1752|M.avium_104 DGPDRPVVLVAHGGLIAALSAALLKLPVPNWPMLGGMGNASWVQLSGHS- MMAR_3747|M.marinum_M TQADRPVVLVAHGGLIAALSAALLRLPVSNWPALGGMGNASWVQLSGHS- MUL_3691|M.ulcerans_Agy99 TQADRPVVLVAHGGLIAALSAALLRLPVSNWPALGGMGNASWVQLSGHS- Mflv_2655|M.gilvum_PYR-GCK AG-DRPVVLVAHGGLIAALTAALLGLPADNWPVLGGMGNASWVQLAGHTR Mvan_3924|M.vanbaalenii_PYR-1 AGSDRPVVLVAHGGLIAALTAALLGLPVDNWPVLGGMGNASWVQLAGHTR MSMEG_4579|M.smegmatis_MC2_155 AGAERPVVLVAHGGLIAALTAELLGLPVDNWPVLGGMGNASWVQLSGHS- TH_0787|M.thermoresistible__bu DGQDRPVVLVAHGGLIAALTAALLGLPVDNWPALGGMGNASWVQLSGHGP MAB_1623|M.abscessus_ATCC_1997 DERDHPVVLVAHGGLIAALTAALLRLDVSNWPVLGGMGNASWVQLGGHS- ::***********:.*:* ** * . **. **.******.**.** Mb2442c|M.bovis_AF2122/97 ---APG----SDFESIRWRLDVWNASAQVSSDVL Rv2419c|M.tuberculosis_H37Rv ---APG----SDFESIRWRLDVWNASAQVSSDVL MLBr_01452|M.leprae_Br4923 ---DESD---SELDLIQWRLDVWNASVQVSNDVL MAV_1752|M.avium_104 ---DDAA---DEFDDIRWRLDVWNASAQVANDVL MMAR_3747|M.marinum_M ---DAAG---SDFDAIRWRLDVWNASAQVANDVL MUL_3691|M.ulcerans_Agy99 ---DAAG---SDFDAIWWRLDVWNASAQVANDVL Mflv_2655|M.gilvum_PYR-GCK ADGDPAS-----FDDIRWRLDVWNASAQVAGDVL Mvan_3924|M.vanbaalenii_PYR-1 ADGDPGA-----FADIRWRLDVWNASAQVANDVL MSMEG_4579|M.smegmatis_MC2_155 --ADDAE-----FADIRWRLDVWNASAQVANDVL TH_0787|M.thermoresistible__bu ADPDGGDPDGSVFDRIRWRLDVWNASAQVAGDVL MAB_1623|M.abscessus_ATCC_1997 --ADGAG-----FDDIRWRLDVWNASAQVTNDVL . : * *********.**:.***