For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. smegmatis MC2 155 MSMEG_4242 (-)

annotation: transcriptional regulatory protein
coordinates: 4326128 - 4326532
length: 134

SSIPAADDVLDPDEAVYDLPTVADILGIPVTKVHQQLRDGHLVAVRRNGVIAVPKIFFDDAGHVVKSLPG
LLVVLRDGGYRTNEILRWLFTPDESLTITRDGSTERLTNARPVDALHSHQAREVIRRAQAMAY*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. smegmatis MC2 155MSMEG_4242--100% (134)transcriptional regulatory protein

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb2197c-1e-5472.39% (134) putative regulatory protein
M. gilvum PYR-GCKMflv_2973-4e-4279.21% (101) hypothetical protein Mflv_2973
M. tuberculosis H37RvRv2175c-9e-5673.13% (134) putative regulatory protein
M. leprae Br4923MLBr_00898-1e-5067.91% (134) putative DNA-binding protein
M. abscessus ATCC 19977MAB_1990-2e-4364.93% (134) hypothetical protein MAB_1990
M. marinum MMMAR_3210-2e-5572.39% (134) regulatory protein
M. avium 104MAV_2320-7e-5272.80% (125) hypothetical protein MAV_2320
M. thermoresistible (build 8)TH_0710-7e-5879.10% (134) conserved hypothetical regulatory protein
M. ulcerans Agy99MUL_3518-2e-5572.39% (134) regulatory protein
M. vanbaalenii PYR-1Mvan_3538-2e-5980.60% (134) hypothetical protein Mvan_3538

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_2973|M.gilvum_PYR-GCK          ---------------------------------------------MHQHL
Mvan_3538|M.vanbaalenii_PYR-1       ---MQPSPRLSAMSSIPTSEDVLESDEAVYDLPTVARLLGMPVTKVHQQL
MSMEG_4242|M.smegmatis_MC2_155      ------------MSSIPAADDVLDPDEAVYDLPTVADILGIPVTKVHQQL
Mb2197c|M.bovis_AF2122/97           MPGRAPGSTLARVGSILAGDDVLDPDEPTYDLPRVAELLGVPVSKVAQQL
Rv2175c|M.tuberculosis_H37Rv        MPGRAPGSTLARVGSIPAGDDVLDPDEPTYDLPRVAELLGVPVSKVAQQL
MMAR_3210|M.marinum_M               ------------MGSIPAGDDVLDPDEPTYDLSRVAELLGVPVSKVHQQL
MUL_3518|M.ulcerans_Agy99           ------------MGSIPAGDDVLDPDEPTYDLSRVAELLGVPVSKVHQQL
MAV_2320|M.avium_104                ---------------------MLDPDEPIYDLPRVAELLGVPVTKVHQQL
MLBr_00898|M.leprae_Br4923          ------------MGSIPAGDDVLDPDEPTYDLTQVAELLGIPVSRVHRKL
TH_0710|M.thermoresistible__bu      ------------MSSVPAADDVLDPDEPVYRLAEVAELLGIPVTKVQQQL
MAB_1990|M.abscessus_ATCC_1997      ------------MSAIPYVADTLDADEPLFTLKEVAARLRVPVSKVQQYL
                                                                                 : : *

Mflv_2973|M.gilvum_PYR-GCK          RDGHLIAVRRNRSIVVPKAFFDDHGHVVKSLPGLLVVLHDGGYTETEIVR
Mvan_3538|M.vanbaalenii_PYR-1       REGHLVAVRRGGTIVVPKVFFDDSGHVVKSLSGLLVVLRDGGYTETEIVR
MSMEG_4242|M.smegmatis_MC2_155      RDGHLVAVRRNGVIAVPKIFFDDAGHVVKSLPGLLVVLRDGGYRTNEILR
Mb2197c|M.bovis_AF2122/97           REGHLVAVRRAGGVVIPQVFFTNSGQVVKSLPGLLTILHDGGYRDTEIMR
Rv2175c|M.tuberculosis_H37Rv        REGHLVAVRRAGGVVIPQVFFTNSGQVVKSLPGLLTILHDGGYRDTEIMR
MMAR_3210|M.marinum_M               REGHLVAVRREGGVVVPQVFFTSSGQVVKSLPGLLTILHDGGYHDTEIIR
MUL_3518|M.ulcerans_Agy99           REGHLVAVRREGGVVVPQVFFTSSGQVVKSLPGLLTILHDGGYHDTEIIR
MAV_2320|M.avium_104                REGHLVAVRRGEALVVPQVFFTKSGEVVKSLPGLLTILHDGGYRDTEIVR
MLBr_00898|M.leprae_Br4923          CEGYLVAVRRGDSLVVPQIFFTNSGAVVKSLPGLLTILHDGSFHETEIVR
TH_0710|M.thermoresistible__bu      RDGQLVAVRRDGAPVIPKIFFDDDGQVVKNLPGLLIVLRDGGYRETEIVR
MAB_1990|M.abscessus_ATCC_1997      RDGELIAVKRDGEIKVPVIFFSPEGPVVKHLFGLLSVLRDGGYHEPEILR
                                     :* *:**:*     :*  **   * *** * *** :*:**.:   **:*

Mflv_2973|M.gilvum_PYR-GCK          WLFTPDPSLAIRRDGAGEEQANARPVDALHSHQAREVVRRAQAMAY
Mvan_3538|M.vanbaalenii_PYR-1       WLFTPDASLTIRRDGSTEGQANARPVDALHSHQAREVVRRAQAMAY
MSMEG_4242|M.smegmatis_MC2_155      WLFTPDESLTITRDGSTERLTNARPVDALHSHQAREVIRRAQAMAY
Mb2197c|M.bovis_AF2122/97           WLFTPDPSLTITRDGSRDAVSNARPVDALHAHQAREVVRRAQAMAY
Rv2175c|M.tuberculosis_H37Rv        WLFTPDPSLTITRDGSRDAVSNARPVDALHAHQAREVVRRAQAMAY
MMAR_3210|M.marinum_M               WLFTPDPSLTVTRDGSRDAVSNARPVDALHAHQAREVVRRAQAMAY
MUL_3518|M.ulcerans_Agy99           WLFTPDPSLTVTRDGSRDAVSNARPVDALHAHQAREVVRRAQAMAY
MAV_2320|M.avium_104                WLFTRDPSLTVTRDGSRDAISNARPVDALHAHQAREVVRRAQAMAY
MLBr_00898|M.leprae_Br4923          WLFTPDPSLTLTRDGSRDVVSNARPVDALHTHQAREVVRRAQAMAY
TH_0710|M.thermoresistible__bu      WLFTPDPSLTITRDGSREPLSNVRPVDALHSHQAREVVRRAQAMAY
MAB_1990|M.abscessus_ATCC_1997      WLFAGDESLTVSRDGTTERIEAARPVDALHGHQAREVLRRAQAMAY
                                    ***: * **:: ***: :    .******* ******:********