For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. smegmatis MC2 155 MSMEG_4239 (-)

annotation: LppM protein
coordinates: 4322593 - 4323288
length: 231

VRVRRPSRSRRRLLVLVMLLLLVLPTAVGCVRIRASITVSPDDRVSGQIIAAAKPSDADDKGPQLVNNLP
FAHKVAVSEYSRDDYVGSQAVFSDLSFAEVPQLAALSRDAAGVDISLRRAGDLVILEGRVDLTSMNDPEA
DVLLTVSFPGDVTSTNGDQVTSSIVEWKLRPGVVSTMNAQARYTDPSARSFTTAAIWLVIAAFVVASVVA
GLAYVSRDQSPKPGEPAPTET
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. smegmatis MC2 155MSMEG_4239--100% (231)LppM protein

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb2193lppM1e-7864.35% (216) lipoprotein lppM
M. gilvum PYR-GCKMflv_2976-3e-9979.45% (219) LppM
M. tuberculosis H37RvRv2171lppM1e-7864.35% (216) lipoprotein lppM
M. leprae Br4923MLBr_00902-1e-7261.97% (213) putative lipoprotein
M. abscessus ATCC 19977MAB_1994c-2e-6656.68% (217) lipoprotein LppM
M. marinum MMMAR_3206lppM2e-7964.16% (226) lipoprotein LppM
M. avium 104MAV_2323-6e-7965.78% (225) LppM protein
M. thermoresistible (build 8)TH_0707lppM5e-8670.64% (218) Probable conserved lipoprotein lppM
M. ulcerans Agy99MUL_3514lppM5e-7664.65% (215) lipoprotein LppM
M. vanbaalenii PYR-1Mvan_3535-7e-9778.44% (218) LppM

CLUSTAL 2.0.9 multiple sequence alignment


Mb2193|M.bovis_AF2122/97            --------------MARTRRRGMLAIAMLLM-LVPLATGCLRVRASITIS
Rv2171|M.tuberculosis_H37Rv         --------------MARTRRRGMLAIAMLLM-LVPLATGCLRVRASITIS
MMAR_3206|M.marinum_M               MRASSPPLSAPAAPALRARRRRLLAIAMLLM-LVPLATGCLRVRASITIS
MUL_3514|M.ulcerans_Agy99           ---------------------------MLLM-LVPLATGCLRVRASITIS
MAV_2323|M.avium_104                -----------------MRRRRLLAFAMLLL-VVPLATGCLRVRASLTIS
MLBr_00902|M.leprae_Br4923          MRARFPPLFTRG---CTAQRRRTLTIALLLVAMVPLATGCLRVTASITIS
Mflv_2976|M.gilvum_PYR-GCK          ----------MLTR--HRTRRRLLAMVLLLLVVAPSLIGCVRVRASITVS
Mvan_3535|M.vanbaalenii_PYR-1       ----------MLNR--HRARRRLFALVLLLLVVAPSLIGCVRIRASITVS
MSMEG_4239|M.smegmatis_MC2_155      ----------MRVRRPSRSRRRLLVLVMLLLLVLPTAVGCVRIRASITVS
TH_0707|M.thermoresistible__bu      -----------------------VIAVLALLLMLPALVGCVRVRASITVS
MAB_1994c|M.abscessus_ATCC_199      ---------------MTRRGRVARITAVLLLATLPLLSGCVRVKASMTVT
                                                               : *:   *   **:*: **:*::

Mb2193|M.bovis_AF2122/97            PDDLVSGEIIAAAKPKNSKDTGPALDGD-VPFSQKVAVSNYDSDGYVGSQ
Rv2171|M.tuberculosis_H37Rv         PDDLVSGEIIAAAKPKNSKDTGPALDGD-VPFSQKVAVSNYDSDGYVGSQ
MMAR_3206|M.marinum_M               PEDLVSGEIIAAAKPKNNKDTGPQLDSDNVAFSQKVAVSNYDSDGYVGSQ
MUL_3514|M.ulcerans_Agy99           PEDLVSGEIIAAAKPKNNKDTGPQLDSDNVAFSQKVAVSNYDGDGYVGSQ
MAV_2323|M.avium_104                PDDLVSGEIVAAAKPKTPKDTGPQLDSNNLPFSQKVAVSNYDSDGYVGSQ
MLBr_00902|M.leprae_Br4923          PDNLVSGKIIAAAKPKNKNDAGPQLNDN-LPFSQKIAVSNYNSDGYVGSQ
Mflv_2976|M.gilvum_PYR-GCK          PDDRVSGQIVAAAIPRDDNDKGPQLLNN-LPFAQKVAVSDYSRDDYVGSQ
Mvan_3535|M.vanbaalenii_PYR-1       PDDRVSGQIVAAAIPRDDNDKGPQLLNN-LPFAQKVAVSDYSRDDYVGSQ
MSMEG_4239|M.smegmatis_MC2_155      PDDRVSGQIIAAAKPSDADDKGPQLVNN-LPFAHKVAVSEYSRDDYVGSQ
TH_0707|M.thermoresistible__bu      PDDRVSGQIIAAAKVEDPADEGPQLVNS-LPFANKVSVSRYERDDYVGTQ
MAB_1994c|M.abscessus_ATCC_199      TDDHVSGQLIAVAKPQGKNDKGPQLDRN-MSFAEKVQVSEYEENGMVGSR
                                    .:: ***:::*.*      * ** *  . :.*:.*: ** *. :. **::

Mb2193|M.bovis_AF2122/97            AVFSDLTFAELPQLANMNSDAAGVNLSLRRNGNIVILEGRADLTSVSD-P
Rv2171|M.tuberculosis_H37Rv         AVFSDLTFAELPQLANMNSDAAGVNLSLRRNGNIVILEGRADLTSVSD-P
MMAR_3206|M.marinum_M               AVFSDLTFAELPQLANMNPDAAGVNLSLRRNGNMVILEGRVDLTSVTD-A
MUL_3514|M.ulcerans_Agy99           AVFSDLTFAELPQLANMNPDAAGVNLSLRRNGNMVILEGRVDLTSVTD-A
MAV_2323|M.avium_104                AVFSDLTFAELPQLANMNSDAAGVNLSLRRNGNLVLLEGRADLTSLTD-P
MLBr_00902|M.leprae_Br4923          AVFSDLTFAELPQLANMNSSTTDVTLSLRRNGNLVILESRADLTSVTD-P
Mflv_2976|M.gilvum_PYR-GCK          ATFSDLTFAELPQLAAMNRDAAGVDISLRRAGDLVILEGRVDLTSLSD-P
Mvan_3535|M.vanbaalenii_PYR-1       AVFSDLTFAELPQLASMNRDAAGVDISLRRAGDLVILEGRADLTSLSD-P
MSMEG_4239|M.smegmatis_MC2_155      AVFSDLSFAEVPQLAALSRDAAGVDISLRRAGDLVILEGRVDLTSMND-P
TH_0707|M.thermoresistible__bu      ATFSGLTFAELPQLANLNREAAGMDLSLRRAGNVVILEGRVDLTTLND-P
MAB_1994c|M.abscessus_ATCC_199      AIFNDLTFSEVPQLAGMNKNAAGFDLTLRRNGDVVVLEGRADLTALGDNS
                                    * *..*:*:*:**** :. .::.. ::*** *::*:**.*.***:: * .

Mb2193|M.bovis_AF2122/97            DADVELTVAFPAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQARYTDPNT
Rv2171|M.tuberculosis_H37Rv         DADVELTVAFPAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQARYTDPNT
MMAR_3206|M.marinum_M               DAEVELTVAFPGTVTSTNGDRIEPEVVQWKLKPGVVSTMNAQARYTDPNT
MUL_3514|M.ulcerans_Agy99           DAEVELTVAFPGTVTSTNGDRIEPEVVQWKLKPGVVSTMNAQARYTDPNT
MAV_2323|M.avium_104                EADVELTVAFPGVVTSTNGDRVEPDVVSWKLKPGVVSTMTAQARYTDPNT
MLBr_00902|M.leprae_Br4923          DADVELTVAFPGVVTSTNGDRIETKVVAWKLKPGVVSTMSARARYTDPDT
Mflv_2976|M.gilvum_PYR-GCK          EADVSLSVAFPGEVTSTNGDQISSSVVEWKLRPGVVSTMNAQARYTDPSA
Mvan_3535|M.vanbaalenii_PYR-1       EADVSLSVAFPGEVTSTNGEQISSSVVEWKLRPGVVSTMNAQARYTDPSA
MSMEG_4239|M.smegmatis_MC2_155      EADVLLTVSFPGDVTSTNGDQVTSSIVEWKLRPGVVSTMNAQARYTDPSA
TH_0707|M.thermoresistible__bu      QADVSLTVSFPGEVTSTNGNRISAEIVEWKLRPGVVSTMSAQARYTDPST
MAB_1994c|M.abscessus_ATCC_199      NADVSLAVSFPGDIESTNGEMLGSDSVQWKLNPGVVSSFTATARYTDPST
                                    :*:* *:*:**. : ****: : .. * ***.*****::.* ******.:

Mb2193|M.bovis_AF2122/97            RSFTGAGIWLGIAAFAAAGVVAVLAWIDRDRSPRLTASGDPPTS-
Rv2171|M.tuberculosis_H37Rv         RSFTGAGIWLGIAAFAAAGVVAVLAWIDRDRSPRLTASGDPPTS-
MMAR_3206|M.marinum_M               RSFTAAGIWLAIASFAAAGVVAALAWVSRDRSPRFTAPGDQPPS-
MUL_3514|M.ulcerans_Agy99           RSFTAAGIWLAIASFAAAGAVAALAWVSRDRSPRFTAPGDQPPS-
MAV_2323|M.avium_104                RSFTGAVVWLGIASFAAAGVVGLLAWVSRDRSPRLTAPRDQPPPE
MLBr_00902|M.leprae_Br4923          RSFTGAAVWLGIASFSAASVVVLLAWNERKSSARLQIPRDSSSS-
Mflv_2976|M.gilvum_PYR-GCK          RSFAGAAIWLGVASFLVAGIVAWLAYSNRDRSPRPGEPQEQTH--
Mvan_3535|M.vanbaalenii_PYR-1       RSFTGAAIWLGMASLVVAGIIGWLAYSNRDRSPRPGETQEPTR--
MSMEG_4239|M.smegmatis_MC2_155      RSFTTAAIWLVIAAFVVASVVAGLAYVSRDQSPKPGEPAPTET--
TH_0707|M.thermoresistible__bu      RSFVKAAIWLGVVSFAVAAVIAVLAWRSRDRSPKVWEIQPQDS--
MAB_1994c|M.abscessus_ATCC_199      RSFNGAAIFVSIAALLVGALVASMAWLDRDQSPRFTPEQFPE---
                                    ***  * ::: :.:: ... :  :*: .*. *.: