For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VRVRRPSRSRRRLLVLVMLLLLVLPTAVGCVRIRASITVSPDDRVSGQIIAAAKPSDADDKGPQLVNNLP FAHKVAVSEYSRDDYVGSQAVFSDLSFAEVPQLAALSRDAAGVDISLRRAGDLVILEGRVDLTSMNDPEA DVLLTVSFPGDVTSTNGDQVTSSIVEWKLRPGVVSTMNAQARYTDPSARSFTTAAIWLVIAAFVVASVVA GLAYVSRDQSPKPGEPAPTET
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_4239 | - | - | 100% (231) | LppM protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2193 | lppM | 1e-78 | 64.35% (216) | lipoprotein lppM |
M. gilvum PYR-GCK | Mflv_2976 | - | 3e-99 | 79.45% (219) | LppM |
M. tuberculosis H37Rv | Rv2171 | lppM | 1e-78 | 64.35% (216) | lipoprotein lppM |
M. leprae Br4923 | MLBr_00902 | - | 1e-72 | 61.97% (213) | putative lipoprotein |
M. abscessus ATCC 19977 | MAB_1994c | - | 2e-66 | 56.68% (217) | lipoprotein LppM |
M. marinum M | MMAR_3206 | lppM | 2e-79 | 64.16% (226) | lipoprotein LppM |
M. avium 104 | MAV_2323 | - | 6e-79 | 65.78% (225) | LppM protein |
M. thermoresistible (build 8) | TH_0707 | lppM | 5e-86 | 70.64% (218) | Probable conserved lipoprotein lppM |
M. ulcerans Agy99 | MUL_3514 | lppM | 5e-76 | 64.65% (215) | lipoprotein LppM |
M. vanbaalenii PYR-1 | Mvan_3535 | - | 7e-97 | 78.44% (218) | LppM |
CLUSTAL 2.0.9 multiple sequence alignment Mb2193|M.bovis_AF2122/97 --------------MARTRRRGMLAIAMLLM-LVPLATGCLRVRASITIS Rv2171|M.tuberculosis_H37Rv --------------MARTRRRGMLAIAMLLM-LVPLATGCLRVRASITIS MMAR_3206|M.marinum_M MRASSPPLSAPAAPALRARRRRLLAIAMLLM-LVPLATGCLRVRASITIS MUL_3514|M.ulcerans_Agy99 ---------------------------MLLM-LVPLATGCLRVRASITIS MAV_2323|M.avium_104 -----------------MRRRRLLAFAMLLL-VVPLATGCLRVRASLTIS MLBr_00902|M.leprae_Br4923 MRARFPPLFTRG---CTAQRRRTLTIALLLVAMVPLATGCLRVTASITIS Mflv_2976|M.gilvum_PYR-GCK ----------MLTR--HRTRRRLLAMVLLLLVVAPSLIGCVRVRASITVS Mvan_3535|M.vanbaalenii_PYR-1 ----------MLNR--HRARRRLFALVLLLLVVAPSLIGCVRIRASITVS MSMEG_4239|M.smegmatis_MC2_155 ----------MRVRRPSRSRRRLLVLVMLLLLVLPTAVGCVRIRASITVS TH_0707|M.thermoresistible__bu -----------------------VIAVLALLLMLPALVGCVRVRASITVS MAB_1994c|M.abscessus_ATCC_199 ---------------MTRRGRVARITAVLLLATLPLLSGCVRVKASMTVT : *: * **:*: **:*:: Mb2193|M.bovis_AF2122/97 PDDLVSGEIIAAAKPKNSKDTGPALDGD-VPFSQKVAVSNYDSDGYVGSQ Rv2171|M.tuberculosis_H37Rv PDDLVSGEIIAAAKPKNSKDTGPALDGD-VPFSQKVAVSNYDSDGYVGSQ MMAR_3206|M.marinum_M PEDLVSGEIIAAAKPKNNKDTGPQLDSDNVAFSQKVAVSNYDSDGYVGSQ MUL_3514|M.ulcerans_Agy99 PEDLVSGEIIAAAKPKNNKDTGPQLDSDNVAFSQKVAVSNYDGDGYVGSQ MAV_2323|M.avium_104 PDDLVSGEIVAAAKPKTPKDTGPQLDSNNLPFSQKVAVSNYDSDGYVGSQ MLBr_00902|M.leprae_Br4923 PDNLVSGKIIAAAKPKNKNDAGPQLNDN-LPFSQKIAVSNYNSDGYVGSQ Mflv_2976|M.gilvum_PYR-GCK PDDRVSGQIVAAAIPRDDNDKGPQLLNN-LPFAQKVAVSDYSRDDYVGSQ Mvan_3535|M.vanbaalenii_PYR-1 PDDRVSGQIVAAAIPRDDNDKGPQLLNN-LPFAQKVAVSDYSRDDYVGSQ MSMEG_4239|M.smegmatis_MC2_155 PDDRVSGQIIAAAKPSDADDKGPQLVNN-LPFAHKVAVSEYSRDDYVGSQ TH_0707|M.thermoresistible__bu PDDRVSGQIIAAAKVEDPADEGPQLVNS-LPFANKVSVSRYERDDYVGTQ MAB_1994c|M.abscessus_ATCC_199 TDDHVSGQLIAVAKPQGKNDKGPQLDRN-MSFAEKVQVSEYEENGMVGSR .:: ***:::*.* * ** * . :.*:.*: ** *. :. **:: Mb2193|M.bovis_AF2122/97 AVFSDLTFAELPQLANMNSDAAGVNLSLRRNGNIVILEGRADLTSVSD-P Rv2171|M.tuberculosis_H37Rv AVFSDLTFAELPQLANMNSDAAGVNLSLRRNGNIVILEGRADLTSVSD-P MMAR_3206|M.marinum_M AVFSDLTFAELPQLANMNPDAAGVNLSLRRNGNMVILEGRVDLTSVTD-A MUL_3514|M.ulcerans_Agy99 AVFSDLTFAELPQLANMNPDAAGVNLSLRRNGNMVILEGRVDLTSVTD-A MAV_2323|M.avium_104 AVFSDLTFAELPQLANMNSDAAGVNLSLRRNGNLVLLEGRADLTSLTD-P MLBr_00902|M.leprae_Br4923 AVFSDLTFAELPQLANMNSSTTDVTLSLRRNGNLVILESRADLTSVTD-P Mflv_2976|M.gilvum_PYR-GCK ATFSDLTFAELPQLAAMNRDAAGVDISLRRAGDLVILEGRVDLTSLSD-P Mvan_3535|M.vanbaalenii_PYR-1 AVFSDLTFAELPQLASMNRDAAGVDISLRRAGDLVILEGRADLTSLSD-P MSMEG_4239|M.smegmatis_MC2_155 AVFSDLSFAEVPQLAALSRDAAGVDISLRRAGDLVILEGRVDLTSMND-P TH_0707|M.thermoresistible__bu ATFSGLTFAELPQLANLNREAAGMDLSLRRAGNVVILEGRVDLTTLND-P MAB_1994c|M.abscessus_ATCC_199 AIFNDLTFSEVPQLAGMNKNAAGFDLTLRRNGDVVVLEGRADLTALGDNS * *..*:*:*:**** :. .::.. ::*** *::*:**.*.***:: * . Mb2193|M.bovis_AF2122/97 DADVELTVAFPAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQARYTDPNT Rv2171|M.tuberculosis_H37Rv DADVELTVAFPAAVTSTNGDRIEPEVVQWKLKPGVVSTMSAQARYTDPNT MMAR_3206|M.marinum_M DAEVELTVAFPGTVTSTNGDRIEPEVVQWKLKPGVVSTMNAQARYTDPNT MUL_3514|M.ulcerans_Agy99 DAEVELTVAFPGTVTSTNGDRIEPEVVQWKLKPGVVSTMNAQARYTDPNT MAV_2323|M.avium_104 EADVELTVAFPGVVTSTNGDRVEPDVVSWKLKPGVVSTMTAQARYTDPNT MLBr_00902|M.leprae_Br4923 DADVELTVAFPGVVTSTNGDRIETKVVAWKLKPGVVSTMSARARYTDPDT Mflv_2976|M.gilvum_PYR-GCK EADVSLSVAFPGEVTSTNGDQISSSVVEWKLRPGVVSTMNAQARYTDPSA Mvan_3535|M.vanbaalenii_PYR-1 EADVSLSVAFPGEVTSTNGEQISSSVVEWKLRPGVVSTMNAQARYTDPSA MSMEG_4239|M.smegmatis_MC2_155 EADVLLTVSFPGDVTSTNGDQVTSSIVEWKLRPGVVSTMNAQARYTDPSA TH_0707|M.thermoresistible__bu QADVSLTVSFPGEVTSTNGNRISAEIVEWKLRPGVVSTMSAQARYTDPST MAB_1994c|M.abscessus_ATCC_199 NADVSLAVSFPGDIESTNGEMLGSDSVQWKLNPGVVSSFTATARYTDPST :*:* *:*:**. : ****: : .. * ***.*****::.* ******.: Mb2193|M.bovis_AF2122/97 RSFTGAGIWLGIAAFAAAGVVAVLAWIDRDRSPRLTASGDPPTS- Rv2171|M.tuberculosis_H37Rv RSFTGAGIWLGIAAFAAAGVVAVLAWIDRDRSPRLTASGDPPTS- MMAR_3206|M.marinum_M RSFTAAGIWLAIASFAAAGVVAALAWVSRDRSPRFTAPGDQPPS- MUL_3514|M.ulcerans_Agy99 RSFTAAGIWLAIASFAAAGAVAALAWVSRDRSPRFTAPGDQPPS- MAV_2323|M.avium_104 RSFTGAVVWLGIASFAAAGVVGLLAWVSRDRSPRLTAPRDQPPPE MLBr_00902|M.leprae_Br4923 RSFTGAAVWLGIASFSAASVVVLLAWNERKSSARLQIPRDSSSS- Mflv_2976|M.gilvum_PYR-GCK RSFAGAAIWLGVASFLVAGIVAWLAYSNRDRSPRPGEPQEQTH-- Mvan_3535|M.vanbaalenii_PYR-1 RSFTGAAIWLGMASLVVAGIIGWLAYSNRDRSPRPGETQEPTR-- MSMEG_4239|M.smegmatis_MC2_155 RSFTTAAIWLVIAAFVVASVVAGLAYVSRDQSPKPGEPAPTET-- TH_0707|M.thermoresistible__bu RSFVKAAIWLGVVSFAVAAVIAVLAWRSRDRSPKVWEIQPQDS-- MAB_1994c|M.abscessus_ATCC_199 RSFNGAAIFVSIAALLVGALVASMAWLDRDQSPRFTPEQFPE--- *** * ::: :.:: ... : :*: .*. *.: