For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VMLDWSDVDVAVRDAVREFVDKEIRPHLDELESGDMEPYPIIRKLFSTFGIDTMAKEALDKRLARLRAGE DKPGKSSGGGMFGGGSPGMGFVLISELCRVSMGLVTGMGVSLGLTVPTIQSRGTLAQQERWLPGLVTYEK IGAWAITEPDSGSDAFGGMKSYVVRDGDDYILNGQKTFITNGPDADVVVVYAKLDEGDGVDKRDRKVLTF VLDKGMEGFVQSKPFRKMGIHSSRTGELFFNNVRLGRDRLLGETEDHGAGDGRDSARSSFSAERIGVAAM ALGVIEECLRLSVDYAKSRKLWGQEIGQFQLIQLKLANMEVARMNVRNMLFRVIESSQEGKPISLAEASA IKWYCSQAATDVAMDAVQLFGGNGYMTEYRVEQLARDAKSLMIYAGSNEVQITHVARGLLS
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_3783 | - | - | 100% (411) | acyl-CoA dehydrogenase |
M. smegmatis MC2 155 | MSMEG_5197 | - | 1e-48 | 32.36% (411) | long-chain specific acyl-CoA dehydrogenase |
M. smegmatis MC2 155 | MSMEG_0108 | - | 7e-47 | 32.06% (393) | acyl-CoA dehydrogenase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2812c | fadE21 | 1e-150 | 66.83% (410) | acyl-CoA dehydrogenase FADE21 |
M. gilvum PYR-GCK | Mflv_3537 | - | 0.0 | 92.98% (413) | acyl-CoA dehydrogenase domain-containing protein |
M. tuberculosis H37Rv | Rv2789c | fadE21 | 1e-150 | 66.83% (410) | acyl-CoA dehydrogenase FADE21 |
M. leprae Br4923 | MLBr_00737 | fadE25 | 2e-42 | 30.27% (403) | putative acyl-CoA dehydrogenase |
M. abscessus ATCC 19977 | MAB_2395 | - | 0.0 | 79.01% (424) | acyl-CoA dehydrogenase FadE |
M. marinum M | MMAR_1919 | fadE21 | 1e-155 | 67.31% (413) | acyl-CoA dehydrogenase FadE21 |
M. avium 104 | MAV_3680 | - | 1e-166 | 72.66% (417) | putative acyl-CoA dehydrogenase |
M. thermoresistible (build 8) | TH_4655 | - | 0.0 | 91.95% (410) | PUTATIVE acyl-CoA dehydrogenase |
M. ulcerans Agy99 | MUL_2144 | fadE21 | 1e-155 | 66.67% (411) | acyl-CoA dehydrogenase FadE21 |
M. vanbaalenii PYR-1 | Mvan_3323 | - | 0.0 | 89.08% (412) | acyl-CoA dehydrogenase domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment Mb2812c|M.bovis_AF2122/97 -MFEWSDTDLMVRDAVRQFIDKEIRPHQDALETGELSPYPIARKLFSQFG Rv2789c|M.tuberculosis_H37Rv -MFEWSDTDLMVRDAVRQFIDKEIRPHQDALETGELSPYPIARKLFSQFG MMAR_1919|M.marinum_M -MIEWSDTDLMMRDAVRQFIDREIRPNLDELETGALSPYPIMRKLFSQFG MUL_2144|M.ulcerans_Agy99 -MIEWSDTDLMMRGAVRQFIDREIRPNLDELETGALSPYPIMRKLFSQFG MAV_3680|M.avium_104 -MIEWSDTDLMVRDAVRQFVDKEIRPHLDELESGAMSPYPIARKLFSQFG MSMEG_3783|M.smegmatis_MC2_155 MMLDWSDVDVAVRDAVREFVDKEIRPHLDELESGDMEPYPIIRKLFSTFG Mflv_3537|M.gilvum_PYR-GCK -MLDWSDVDIAVRDAVREFVDKEIRPHLDELESGDMEPYPIVRKLFATFG TH_4655|M.thermoresistible__bu -MLDWSDVDLAVRDAVREFIDKEIRPHLDELESGDMEPYPIVRKLFATFG Mvan_3323|M.vanbaalenii_PYR-1 -MLEWSDVDIAVRDAVREFVDKEVRPHLDALESGEMEPYPIIRKLFATFG MAB_2395|M.abscessus_ATCC_1997 -MLDWSPIDLAVRDAVRQFIDKEVRPHVDALESGEMEPYPIIRKMFATFG MLBr_00737|M.leprae_Br4923 -MVGWSGNPLFDLFKLPEEHN-ELRATIRALAEKEIAPHAADVDQRARFP *. ** : : : : *:*. * : *:. . : * Mb2812c|M.bovis_AF2122/97 LDVLLAESVNQMLDGERA------KR-EKRD-----SSGSF----GLADQ Rv2789c|M.tuberculosis_H37Rv LDVLLAESVNQMLDGERA------KR-EKRD-----SSGSF----GLADQ MMAR_1919|M.marinum_M LDVLAAESVKSILDAERA------DQGEKRHR----TSGSG----GLGPQ MUL_2144|M.ulcerans_Agy99 LDVLAAESVKSILDAERA------NQDEKRHR----TSGSG----GLGPQ MAV_3680|M.avium_104 LDTMAAEAVKKMLDRERS------GADENGD-----SSGAANEFSGGGAQ MSMEG_3783|M.smegmatis_MC2_155 IDTMAKEALDKRLARLRA------GEDKPGKS----SGGGMF---GGG-S Mflv_3537|M.gilvum_PYR-GCK IDAMAKEALDKRLARMRE------GGEKPSKS----GGGGMF---GGG-S TH_4655|M.thermoresistible__bu IDKMAKEALDKRLARLRE------GGEAKTAG----SRGGMF---GGG-S Mvan_3323|M.vanbaalenii_PYR-1 IADMARESLNKRLDRLRD------GTESPGKS----AGGGMF---GGGGS MAB_2395|M.abscessus_ATCC_1997 IDALAKEGLQKQIEKKKAREAALAAGEQPAESKKSDGGGAMG---LAGGS MLBr_00737|M.leprae_Br4923 EEALAALNASGFNAIHVP----------EEYG-------------GQGAD : . . . Mb2812c|M.bovis_AF2122/97 ASMVAVLVSELAGVSIGLLSTVAVSLGLGAATIMSRGTLAQQERWVPTLV Rv2789c|M.tuberculosis_H37Rv ASMVAVLVSELAGVSIGLLSTVAVSLGLGAATIMSRGTLAQQERWVPTLV MMAR_1919|M.marinum_M ASMAAVLVSELAGVSIGLLSTVAVSLGLGAATIMSRGTLAQKQRWLPELM MUL_2144|M.ulcerans_Agy99 ASMAAVLVSELAGVSIGLLSTVAVSLGLGAATIMSRGTLAQKQRWLPELM MAV_3680|M.avium_104 GSMIAVLVSEIARVSIGLLSTASVSLGLGAATIASRGTLAQKERWLPELM MSMEG_3783|M.smegmatis_MC2_155 PGMGFVLISELCRVSMGLVTGMGVSLGLTVPTIQSRGTLAQQERWLPGLV Mflv_3537|M.gilvum_PYR-GCK AGMGFVLISELCRVSMGLVTGMGVSLGLTVPTIQGRGTLAQQERWLPGLV TH_4655|M.thermoresistible__bu PGMGFVLISELCRVSMGLVTGMGVSLGLTVPTIQSRGTLAQQERWLPGLV Mvan_3323|M.vanbaalenii_PYR-1 PGMGFVVISELCRVSMGVVTGMGVSLGLTVPTIMSRGTLAQQERWLPDLV MAB_2395|M.abscessus_ATCC_1997 AGMGFVLTSEISRVCMGLVTGMGVSMGLTVPTIASRGTAAQMECWLPELV MLBr_00737|M.leprae_Br4923 SVAACIVIEEVARVDASASLIPAVNK-LGTMGLILRGSEELKKQVLPSLA :: .*:. * . .*. * . : **: : :* * Mb2812c|M.bovis_AF2122/97 TLEKIAAWAITEPDSGSDAFGGMKTHVTRDGED---YILNGHKTFITNGP Rv2789c|M.tuberculosis_H37Rv TLEKIAAWAITEPDSGSDAFGGMKTHVTRDGED---YILNGHKTFITNGP MMAR_1919|M.marinum_M TLEKIAAWAITEPDSGSDAFGGMKTHVKRDGAD---YILNGQKTFITNGP MUL_2144|M.ulcerans_Agy99 TLEKIAAWAITEPDSGSDAFGGMKTHVKRDGAD---YILNGQKTFITNGP MAV_3680|M.avium_104 TLEKIAAWAITEPDSGSDAFGGMKTSVRRSGDGDGAYILNGQKTFITNGP MSMEG_3783|M.smegmatis_MC2_155 TYEKIGAWAITEPDSGSDAFGGMKSYVVRDGD---DYILNGQKTFITNGP Mflv_3537|M.gilvum_PYR-GCK TYEKIGAWAITEPDSGSDAFGGMKSWVARAADGSGDYILNGQKTFITNGP TH_4655|M.thermoresistible__bu TYEKIGAWAITEPDSGSDAFGGMKSYVVRDGD---DYILNGQKTFITNGP Mvan_3323|M.vanbaalenii_PYR-1 TYDKIGAWAITEPDSGSDAFGGMKSYVTRDGD---DYILNGQKTFITNGP MAB_2395|M.abscessus_ATCC_1997 TYEKVGAWAITEPDSGSDAFGGMKTYVTRDGE---DYILNGQKTFITNGP MLBr_00737|M.leprae_Br4923 AEGAMASYALSEREAGSDAAS-MRTRAKADGDD---WILNGFKCWITNGG : :.::*::* ::**** . *:: . . :**** * :**** Mb2812c|M.bovis_AF2122/97 YADVLVVYAKLAD--GEPASDWRNRPVLVFVLDAGMPGLTQGKPFKKMGM Rv2789c|M.tuberculosis_H37Rv YADVLVVYAKLAD--GEPASDWRNRPVLVFVLDAGMPGLTQGKPFKKMGM MMAR_1919|M.marinum_M YADVLLVYAKLDEA-GATSSDRRDRPVLIFVLESGMAGLTQGKPFKKMGM MUL_2144|M.ulcerans_Agy99 YADVLLVYAKLDEA-GATSSDRRDRPVLIFVLESGMAGLTQGKPFKKMGM MAV_3680|M.avium_104 YADVLVVYAKLDE--GDPSVDKRNRSVLVFVLDAGMPGLTQGKPFKKMGM MSMEG_3783|M.smegmatis_MC2_155 DADVVVVYAKLDEG---DGVDKRDRKVLTFVLDKGMEGFVQSKPFRKMGI Mflv_3537|M.gilvum_PYR-GCK DADVVVVYAKLDE----PGVDKRDRKVLTFVLDKGMEGFVQSKPFRKMGI TH_4655|M.thermoresistible__bu DADVVVVYAKLDE----PGVAPRDRKVLTFVLDKGMEGFVQSRPFRKMGI Mvan_3323|M.vanbaalenii_PYR-1 DADVVVVYAKLDEGD--PSIDKRDRKVLTFVLDKGMDGFVQSKPFRKMGI MAB_2395|M.abscessus_ATCC_1997 DADVIVVYAKLNEGAGKDSVDPRDRKVLTFVLDKGMEGFTQSKPFRKMGI MLBr_00737|M.leprae_Br4923 KSTWYTVMAVTDP-------DKGANGISAFIVHKDDEGFSIGPKEKKLGI : * * . : *::. . *: . :*:*: Mb2812c|M.bovis_AF2122/97 MSSPTGELFFDNVRLTPDRLLCAE-----GDGRDSARANFAVERLGVALM Rv2789c|M.tuberculosis_H37Rv MSSPTGELFFDNVRLTPDRLLCAE-----GDGRDSARANFAVERLGVALM MMAR_1919|M.marinum_M MSSPTGELFFDNVRLTPDRLLGESEHHGDGDGRESARANFAVERLGVALM MUL_2144|M.ulcerans_Agy99 MSSPTGELFFDNVRLTPDRLLGESEHHGDGDGRESARANFAVERLGVALM MAV_3680|M.avium_104 MSSPTGELFFDNVRLTPDRLLGESEQHTEGDGRDSARANFAAERIGIAMM MSMEG_3783|M.smegmatis_MC2_155 HSSRTGELFFNNVRLGRDRLLGETEDHGAGDGRDSARSSFSAERIGVAAM Mflv_3537|M.gilvum_PYR-GCK HSSRTGELFFNNVRLGRDRLLGETENNEAGDGRDSARSSFSAERIGVAAM TH_4655|M.thermoresistible__bu HSSRTGELFFNNVRLGRDRLLGESEDQ-AGDGRDSARSSFSAERIGVAAM Mvan_3323|M.vanbaalenii_PYR-1 HSSRTGELFFNDVRLGRDRLLGETEDNSGGDGRDSARSNFSAERIGVAAM MAB_2395|M.abscessus_ATCC_1997 HSSRTGQLFFENVRLGKDRLLGETETNDQGDGRDSARANFSMERIGVAAL MLBr_00737|M.leprae_Br4923 KGSPTTELYFDKCRIPGDRIIGEP-----GTGFKTALATLDHTRPTIGAQ .* * :*:*:. *: **:: * * .:* :.: * :. Mb2812c|M.bovis_AF2122/97 SLGIINECHRLCVDYAKTRTLWGRNIGQFQLIQLKLAKMEVARINVQNMV Rv2789c|M.tuberculosis_H37Rv SLGIINECHRLCVDYAKTRTLWGRNIGQFQLIQLKLAKMEVARINVQNMV MMAR_1919|M.marinum_M ALGIINECHRLCVDYAKTRTLWGKNIGQFQLIQLKLAKMEVARINVENMV MUL_2144|M.ulcerans_Agy99 ALGIINECHRLCVDYAKTRTLWGKNIGQFQLIQLKLAKMEVARINVENMV MAV_3680|M.avium_104 ALGIIDECHRLCVDYAKSRTLWGKNIGQFQLIQLKLAKMEIARMNVQNMV MSMEG_3783|M.smegmatis_MC2_155 ALGVIEECLRLSVDYAKSRKLWGQEIGQFQLIQLKLANMEVARMNVRNML Mflv_3537|M.gilvum_PYR-GCK ALGVIEECLRLSVDYAKTRKLWGQEIGQFQLIQLKLATMEVARMNVRNML TH_4655|M.thermoresistible__bu ALGVIEECLRLCVDYAKNRKLWGQEIAQFQLIQLKLAKMEVARMNVRNML Mvan_3323|M.vanbaalenii_PYR-1 SLGVIEECLRLCVDYAKSRTLWGKEIAQFQLIQLKLATMEVARMNVRNML MAB_2395|M.abscessus_ATCC_1997 ALGVIEECLRLSLDYAKSRTLWGKEIAQFQLIQLKLAKMEVARLNVRNML MLBr_00737|M.leprae_Br4923 AVGIAQGALDAAIVYTKDRKQFGESISTFQSIQFMLADMAMKVEAARLIV ::*: : . .: *:* *. :*..*. ** **: ** * : .. :: Mb2812c|M.bovis_AF2122/97 FQAIERLKAGKQLTLAEASAIKLYSSEAATDVAMEAVQLFGGNGYMAEYR Rv2789c|M.tuberculosis_H37Rv FQAIERLKAGKQLTLAEASAIKLYSSEAATDVAMEAVQLFGGNGYMAEYR MMAR_1919|M.marinum_M FQTLEKLKAGREPTLAEASAIKLYSSEAATDVAMEAVQLFGGNGYMAEYR MUL_2144|M.ulcerans_Agy99 FQTLEKLKAGREPTLAEASAIKLYSSEAATDVAMEAVQLFGGNGYMAEYR MAV_3680|M.avium_104 FHTIERQQAGKPLTLAEASAIKLYSSEAATEVAMEAVQLFGGNGYMAEYR MSMEG_3783|M.smegmatis_MC2_155 FRVIESSQEGKPISLAEASAIKWYCSQAATDVAMDAVQLFGGNGYMTEYR Mflv_3537|M.gilvum_PYR-GCK FRVIESSQSGAPISLAEASAIKWYCSQAATDVAMDAIQLFGGNGYMTEYR TH_4655|M.thermoresistible__bu FRVIEAAEKGVPISLAEASAIKWYCSEAATDVAMDAVQLFGGNGYMTEYR Mvan_3323|M.vanbaalenii_PYR-1 FRVIEAAQTGTPISLAEASAIKWYCSQAATDVAMEAVQVFGGNGYMTEYR MAB_2395|M.abscessus_ATCC_1997 FHAIESLSENKTPSLAEASAIKLYCSEAATDVAMDAVQLFGGNGYMTEYR MLBr_00737|M.leprae_Br4923 YAAAARAERGEPDLGFISAASKCFASDIAMEVTTDAVQLFGGAGYTSDFP : . . . ::* * :.*: * :*: :*:*:*** ** ::: Mb2812c|M.bovis_AF2122/97 VEQLARDAKSLMIYAGSNEVQVTHIAKGLLGEPASRA Rv2789c|M.tuberculosis_H37Rv VEQLARDAKSLMIYAGSNEVQVTHIAKGLLGEPASRA MMAR_1919|M.marinum_M VEQLARDAKSLMIYAGSNEVQVTHIAKGLLG------ MUL_2144|M.ulcerans_Agy99 VEQLARDAKSLMIYAGSNEVQVTHIAKGLLG------ MAV_3680|M.avium_104 VEQLARDAKSLMIYAGSNEVQVTHIAKGLLSS----- MSMEG_3783|M.smegmatis_MC2_155 VEQLARDAKSLMIYAGSNEVQITHVARGLLS------ Mflv_3537|M.gilvum_PYR-GCK VEQLARDAKSLMIYAGSNEVQITHVARGLLSS----- TH_4655|M.thermoresistible__bu VEQLARDAKSLMIYAGSNEVQITHVARGLLNA----- Mvan_3323|M.vanbaalenii_PYR-1 VEQLARDAKSLMIYAGSNEVQITHVARGLLSQP---- MAB_2395|M.abscessus_ATCC_1997 VEQLARDAKSLMIYAGSNEVQITHIAKGLLADKAR-- MLBr_00737|M.leprae_Br4923 VERFMRDAKITQIYEGTNQIQRVVMSRALLR------ **:: **** ** *:*::* . :::.**