For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VPDNPKPVLNRRRVLLGAAAIGGFLAVDLGALLFATNTLGTQRLTPRAILEALAPPGGRPRGYRANHAKG VAVSGYFDSNGNGQEISRAAGFAPGRTPVIGRFSFGGSDPHVADDPSLARGLGLAFGFPSGQQWRTAMLS LPVFPDKTPEGFYERTLAGKPLPSTGKPDPDAMPKYLAAHPETKAALDIIKAAKPSPGFADSTFRSLMAF YFVDDKGVRTPVRWSLEPMQAALPAGTGDDRLFDALVRQIRSGPVRWRLLLTVGEQQDPVTDATVPWPAD RRVIDAGTLTLDTVETDGPGNGRDVNFDPLVLPDGIEPSEDPMLSARSAAYAASYRLRTSETPSIPPEVQ VDKVEEVAQ
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_3708 | - | - | 100% (359) | catalase |
M. smegmatis MC2 155 | MSMEG_3486 | katA | 4e-10 | 27.09% (299) | catalase KatA |
M. smegmatis MC2 155 | MSMEG_6232 | katA | 8e-09 | 26.62% (308) | catalase KatA |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_3446 | - | 5e-07 | 26.51% (298) | catalase |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1842c | - | 1e-69 | 44.97% (338) | catalase |
M. marinum M | MMAR_2060 | - | 1e-37 | 33.12% (314) | catalase |
M. avium 104 | MAV_3520 | - | 5e-35 | 31.02% (303) | catalase |
M. thermoresistible (build 8) | TH_4479 | - | 4e-11 | 25.32% (316) | PUTATIVE catalase KatE |
M. ulcerans Agy99 | MUL_3283 | - | 1e-38 | 33.44% (314) | catalase |
M. vanbaalenii PYR-1 | Mvan_3201 | - | 4e-08 | 26.51% (298) | catalase |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_3708|M.smegmatis_MC2_155 -------------------MPDNPKPVLNRRRVLLGAAAIGGFLAVDLGA MAB_1842c|M.abscessus_ATCC_199 -------------------MVAHK---LDRR-MFVGLVAAGAVTVTGLGG MMAR_2060|M.marinum_M -------------------------------------------------- MUL_3283|M.ulcerans_Agy99 -------------------------------------------------- MAV_3520|M.avium_104 -------------------------------------------------- Mflv_3446|M.gilvum_PYR-GCK MPAARKRDQSAPAAVSPTGAAKDTQEQQDPRSQSGRHLTTAQGLRLPDTD Mvan_3201|M.vanbaalenii_PYR-1 MPAPRKRDQSAPTRVSPTGASKSTDEQPDPRAQSGRFLTTAQGVRIPDTD TH_4479|M.thermoresistible__bu -----------------------------MTMTTRPFTTTDGGAPAPSDE MSMEG_3708|M.smegmatis_MC2_155 LLFATNTLGTQRLTPRAILEALAPPGGRPRGYRANHAKGVAVSGYFDSNG MAB_1842c|M.abscessus_ATCC_199 FLALEGRAG-SRLTGRSFIDLFEATGGRFVGYRRNHAKALAVSGRFESNG MMAR_2060|M.marinum_M --------MGGSVTPDEAIEAIRGTGGACPGYRALHAKGTLYRGTFTATP MUL_3283|M.ulcerans_Agy99 --------MGGSVTPDEAIEAIRGTGGACPGYRALHAKGTLYRGTFTATP MAV_3520|M.avium_104 --------MSGGLTPDQAIEAIRGTGGAQPGCRALHAKGTLYRGTFTATR Mflv_3446|M.gilvum_PYR-GCK HSLKAGSRGPTLMEDFHLREKITHFDHERIPERVVHARGAAAHGVFEAYG Mvan_3201|M.vanbaalenii_PYR-1 HSLKAGSRGPTLMEDFHLREKITHFDHERIPERVVHARGAAAHGVFEAYG TH_4479|M.thermoresistible__bu RSLTVGPDGPILLQDHYLIEQMANFNRERIPERQPHAKGAGAFGIFEVTN : : : . * **:. * * MSMEG_3708|M.smegmatis_MC2_155 NGQEISRAAGFAP--GRTPVIGRFSFGGSDPHVADDPSLARGLGLAFGFP MAB_1842c|M.abscessus_ATCC_199 AGAEISSASVFTA--GVYPVSGRFSVGGQNPHQPDTGS-GQALALEFSLP MMAR_2060|M.marinum_M EAAGLSRAKHIDG--ATVAALIRFSNGSGKPTQRDGAPGVRGMAVKFTLP MUL_3283|M.ulcerans_Agy99 EAAGLSRAKHFDG--ATVAALIRFSNGSGKPTQRDGAPGVRGMAVKFTLP MAV_3520|M.avium_104 DAVMLSAAPHLDG--STVPALIRFSNGSGNPKQRDGAPGVRGMAVKFTLP Mflv_3446|M.gilvum_PYR-GCK NAASVTKAAFLSKKGAKTDVFCRFSTVLGSRGSADTVRDTRGFAVKFYTD Mvan_3201|M.vanbaalenii_PYR-1 NAASITKAAFLASKGKRTDVFCRFSTVLGSRGSADTVRDTRGFAVKFYTE TH_4479|M.thermoresistible__bu DVSRYTRAAVFQP-GVKTDMLARFSTVAGERGSPDTWRDPRGFALKFYTS : * : *** . * :.:.: * MSMEG_3708|M.smegmatis_MC2_155 SGQQWRTAMLSLPVFPDKTPEGFYERT----LAGKPLPSTGKPDPDAMPK MAB_1842c|M.abscessus_ATCC_199 GGEQWRTAMAAAPVFMAPTPEMFFG----------LLSARLSGDKDRVAA MMAR_2060|M.marinum_M DKSTSDVSMQTARLFTSSTPEGFVD--------LLKALRPSLTTPARIAK MUL_3283|M.ulcerans_Agy99 DKSTTDVSMQTARLFTSSTPEGFVD--------VLKALRPSLTTPARIAK MAV_3520|M.avium_104 DGSTTDVSAQTARLFVSSTPEGFID--------LLKAMRPGLTTPLRLAT Mflv_3446|M.gilvum_PYR-GCK EG-VFDLVGNNMPVFFIQDGIKFPDVVHAAKPHPDREIPQAQSAHDTFWD Mvan_3201|M.vanbaalenii_PYR-1 EG-TFDLVGNNIPVFFIQDGIKFPDVIHAGKPHPDREIPQAQSAHDTFWD TH_4479|M.thermoresistible__bu EG-NFDLVGNNTPIFFMRDPMKFQHFIRSQK----RLARNNLRDHNMQWD :* * MSMEG_3708|M.smegmatis_MC2_155 YLAAHPETKAALDIIKAAKPSPG-FADSTFRSLMAFYFVDDKGVRTPVRW MAB_1842c|M.abscessus_ATCC_199 FMRDNPPAAAAQKLIEAGPKASS-FAAASYSSLNTFIFVTKNGVRTPVRW MMAR_2060|M.marinum_M YLVTHPRVLAALPILGAANRIPASYATCEYHGLHAFRWVAADGSARFVRY MUL_3283|M.ulcerans_Agy99 YLVTHPRVLAALPILGAANRIPASYATCEYHGLHAFRWVAADGSARFVRY MAV_3520|M.avium_104 HLLTHPRLLGALPLLREANRIPASYATTEYHGLHAFRWIAADGSARFVRY Mflv_3446|M.gilvum_PYR-GCK FVSLHTEATHHVFWNMSDRGIPRSYRTMEGFGVHTFRLVNRKGETSLVKF Mvan_3201|M.vanbaalenii_PYR-1 FVSLHTEATHHVLWNMSDRGIPRSYRTMEGFGVHTFRLVNAKGETSLVKF TH_4479|M.thermoresistible__bu FWTLSPESAHQVTWLMGDRGIPKTWRHMNGYGSHTYSWINADGEIFWVKY . . . : . :: : .* *:: MSMEG_3708|M.smegmatis_MC2_155 SLEP---------MQAALPAGTGDDRLFDALVRQIRSG-PVRWRLLLTVG MAB_1842c|M.abscessus_ATCC_199 RVVPDG-------NPTGTAAKDGPNWMFEALAQRVRFG-ELRYRLLLQIG MMAR_2060|M.marinum_M HMIPAVGEK---FLSPLAARNQGADFLTDELQTRLAAG-PVRFYFRVQIA MUL_3283|M.ulcerans_Agy99 HMIPAVGEK---FLSPLAARNQGGDFLTDELQTRLAAG-PVRFYFRVQIA MAV_3520|M.avium_104 HLVPTAAEE---YLSASDARGKDPDFLTDELAARLQGG-PVRFDFRVQIA Mflv_3446|M.gilvum_PYR-GCK HWKPVAGVHSLVWEEAQLAAGFDPDFHRRDMADGIEAGAPLEYELGVQVM Mvan_3201|M.vanbaalenii_PYR-1 HWKPVAGVHSLVWEEAQLAAGFDPDFHRRDMADGIEAGAPLEYELGVQVM TH_4479|M.thermoresistible__bu HFKTDQGIEFLTQEEADRLAGEDADYHTRDLYEAIEGGQYPSWTLKVQIM . . . : : : * : : : : MSMEG_3708|M.smegmatis_MC2_155 EQ--------QDPVTDATVPWPADRRVIDAGTLTLDTVETDGPGNGRDVN MAB_1842c|M.abscessus_ATCC_199 VPG-------QDPTNDPTLPWPPDRRQIDAGTLVLGHAIPREQEHIRDTN MMAR_2060|M.marinum_M GP--------GDSIVDPSVPWQ-GSEMVTVGTLDVTGVDTEREHDGDIVV MUL_3283|M.ulcerans_Agy99 GP--------GDSIVDPSVPWQ-GSEMVTVGTLDVTGVDTEREHDGDIVV MAV_3520|M.avium_104 GP--------TDSTVDPSSAWQ-STQIVTVGTVTITGPDTEREHGGDIVV Mflv_3446|M.gilvum_PYR-GCK PDDGTETFEGIDLLDPTKIVPEELVPVQLIGKLTLDRNPTNYFAETEQVA Mvan_3201|M.vanbaalenii_PYR-1 PDDGTETYAGIDLLDPTKIVPEELVPVQLIGKLTLNRNPTNYFAETEQVA TH_4479|M.thermoresistible__bu PFEEAKTYR-FNPFDLTKVWPHGDYPLIDVGTMTLNRNVEDYHTEMEQAA : .. *.: : . MSMEG_3708|M.smegmatis_MC2_155 FDPLVLPDGIEPSEDPMLSARSAAYAASYRLRTSETPSIPPEVQVDKVEE MAB_1842c|M.abscessus_ATCC_199 FDPTVLPTGIELSDDPILAARAAIYAESFRRRARETPAPVEQFGQDM--- MMAR_2060|M.marinum_M FDPMRVTDGIEASDDPVLRFRTLAYSASVKLRTGVDRGPQAPPDPA---- MUL_3283|M.ulcerans_Agy99 FDPMRVTDGIEASDDPVLRFRTLAYSASVKLRTGVDRGPQAPPDPA---- MAV_3520|M.avium_104 FDPMRVTDGIEPSDDPVLRFRTLVYSASVKLRTGVDRGAQAPPV------ Mflv_3446|M.gilvum_PYR-GCK FHLGNLVPGIEVTNDPLLQARLFSYLDTQLTRLGGPNFNQLPINRPRCPV Mvan_3201|M.vanbaalenii_PYR-1 FHTGNLVPGIEVTNDPLMQARLFSYLDTQLTRLGGPNFTQLPINRPRCPV TH_4479|M.thermoresistible__bu FEPNNLVPGTGLSPDKMLLARGFSYADAHRARLG-VNYKQIPVNSPRVEV *. : * : * :: * * : * MSMEG_3708|M.smegmatis_MC2_155 VAQ----------------------------------------------- MAB_1842c|M.abscessus_ATCC_199 -------------------------------------------------- MMAR_2060|M.marinum_M -------------------------------------------------- MUL_3283|M.ulcerans_Agy99 -------------------------------------------------- MAV_3520|M.avium_104 -------------------------------------------------- Mflv_3446|M.gilvum_PYR-GCK NDMLRDGMHQTAIHTGQAPYLPNSIDGGEPLVADADEGGYVQTPRPVEGR Mvan_3201|M.vanbaalenii_PYR-1 NDMLRDGMHQTAIHTGQAPYRPNSIDGGEPLVADADEGGYVQSARPVEGR TH_4479|M.thermoresistible__bu HSYSKDGAMR-IQNVKDPVYAPNSYGG---PVADESRAAEVRWMSDGEMV MSMEG_3708|M.smegmatis_MC2_155 -------------------------------------------------- MAB_1842c|M.abscessus_ATCC_199 -------------------------------------------------- MMAR_2060|M.marinum_M -------------------------------------------------- MUL_3283|M.ulcerans_Agy99 -------------------------------------------------- MAV_3520|M.avium_104 -------------------------------------------------- Mflv_3446|M.gilvum_PYR-GCK VGRVAPASFDDHFTQPAMFYRS-LTPIEQDHIVEAFTFELGKCYEQAIKE Mvan_3201|M.vanbaalenii_PYR-1 VARVAPTSFDDHFTQAAMFYRS-LTPIEQAHIVEAFTFELGKCYEQAVKE TH_4479|M.thermoresistible__bu RSAYTLHAEDDDWGQAGTLVREVLDDAARERLANNIIGHVSNGVKEPVLS MSMEG_3708|M.smegmatis_MC2_155 -------------------------------------------------- MAB_1842c|M.abscessus_ATCC_199 -------------------------------------------------- MMAR_2060|M.marinum_M -------------------------------------------------- MUL_3283|M.ulcerans_Agy99 -------------------------------------------------- MAV_3520|M.avium_104 -------------------------------------------------- Mflv_3446|M.gilvum_PYR-GCK RQLEVLANVDADLCAKVAAGLGLPAPKGNPPKDVTLSPALSQVVTTPGPV Mvan_3201|M.vanbaalenii_PYR-1 RQLEVLADVDAELCEQVAQGLGLPAPKGKPPAEVTLSPALSQVVTTPGPV TH_4479|M.thermoresistible__bu RVFEYWRNVDADLGKKVEEGVRARLNHTN--------------------- MSMEG_3708|M.smegmatis_MC2_155 -------------------------------------------------- MAB_1842c|M.abscessus_ATCC_199 -------------------------------------------------- MMAR_2060|M.marinum_M -------------------------------------------------- MUL_3283|M.ulcerans_Agy99 -------------------------------------------------- MAV_3520|M.avium_104 -------------------------------------------------- Mflv_3446|M.gilvum_PYR-GCK AGRKVAIIADADSDLAGVSKLIKAMDKAGVVPMVTAPVGGTLKSGRRSVI Mvan_3201|M.vanbaalenii_PYR-1 KGRKVAIIADDDSDLAGVAKLVKALDKAGVIPAIVAPAGGILKSGRRTLT TH_4479|M.thermoresistible__bu ----------------GV-------------------------------- MSMEG_3708|M.smegmatis_MC2_155 -------------------------------------------------- MAB_1842c|M.abscessus_ATCC_199 -------------------------------------------------- MMAR_2060|M.marinum_M -------------------------------------------------- MUL_3283|M.ulcerans_Agy99 -------------------------------------------------- MAV_3520|M.avium_104 -------------------------------------------------- Mflv_3446|M.gilvum_PYR-GCK VERTFDTARSIEFDAVVVADGALQRHDIKAVVLLHEMLRHCKPLGAWGNG Mvan_3201|M.vanbaalenii_PYR-1 VDRTFDTARSIEFDAVVVAGGALERLDIKMVVLLHEMLRHCKPLGAWGDA TH_4479|M.thermoresistible__bu -------------------------------------------------- MSMEG_3708|M.smegmatis_MC2_155 -------------------------------------------------- MAB_1842c|M.abscessus_ATCC_199 -------------------------------------------------- MMAR_2060|M.marinum_M -------------------------------------------------- MUL_3283|M.ulcerans_Agy99 -------------------------------------------------- MAV_3520|M.avium_104 -------------------------------------------------- Mflv_3446|M.gilvum_PYR-GCK SAALEAAGISLSDPGVVTSGDVSTAFGTELLAALGLHRVWERADAVMASA Mvan_3201|M.vanbaalenii_PYR-1 RNALQRVDIDLQDPGVVTDDDASSSFGAELLAALGLHRVWDRADAVMSSA TH_4479|M.thermoresistible__bu -------------------------------------------------- MSMEG_3708|M.smegmatis_MC2_155 ----------------- MAB_1842c|M.abscessus_ATCC_199 ----------------- MMAR_2060|M.marinum_M ----------------- MUL_3283|M.ulcerans_Agy99 ----------------- MAV_3520|M.avium_104 ----------------- Mflv_3446|M.gilvum_PYR-GCK VPPVSASVKTTKRSRKG Mvan_3201|M.vanbaalenii_PYR-1 VAPVRPAAPTTKRTRRR TH_4479|M.thermoresistible__bu -----------------