For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
AQLLKVQNFNVSQDGFGAADNQCFERPFGDVDPNRMFAWAGATASWPNRTDSGGSRGLDDYFTRDFANNI GAEIMGRNKFSPHRGPWADHEWRGWWGDEPPFHTPVFVLTHHPRPSFTLSDTTFHFIDADPHTALRLARK AAQGKDVRLGGGASTVREFLDAGLIDTLHVAVSPAVTIGSGSRLWETPEELLDRYHLEVVPSSSGVLHHL FWRR*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_3449 | - | - | 100% (215) | DNA-binding protein |
M. smegmatis MC2 155 | MSMEG_0308 | - | 2e-05 | 31.09% (119) | dihydrofolate reductase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_0431 | - | 5e-06 | 30.37% (135) | bifunctional deaminase-reductase-like protein |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_2852 | - | 2e-05 | 28.57% (98) | hypothetical protein MMAR_2852 |
M. avium 104 | - | - | - | - | - |
M. thermoresistible (build 8) | TH_1907 | - | 2e-06 | 31.67% (120) | dihydrofolate reductase |
M. ulcerans Agy99 | MUL_2905 | - | 2e-05 | 28.57% (98) | hypothetical protein MUL_2905 |
M. vanbaalenii PYR-1 | Mvan_1260 | - | 1e-105 | 79.53% (215) | DNA-binding protein |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_0431|M.gilvum_PYR-GCK ---MSTIYYTASSLDGYIVDDHGSLDWLTSRAIDADGPFGIE-------- TH_1907|M.thermoresistible__bu -LIMATVYFTAASLDGFIVDDHDSLDWLVTRDIDPDGPFGYR-------- MMAR_2852|M.marinum_M --MGQIVFDTATTLNGWIADENNSLAWLFA--VDQGGLPESG-------- MUL_2905|M.ulcerans_Agy99 --MGQIVFDTATTLNGWIADENNSLAWLFA--VDQGGLPESG-------- MSMEG_3449|M.smegmatis_MC2_155 MAQLLKVQNFNVSQDGFGAADNQCFERPFG-DVDPNRMFAWAGATASWPN Mvan_1260|M.vanbaalenii_PYR-1 MVQLLKVQNFNVSGDGFGAGVDQSFERPFG-HIDPSSMFAWCGATASWPN : : :*: . . .: :* . Mflv_0431|M.gilvum_PYR-GCK ----------------PFMADIGSLVMGADTYEWILR-----NHPGEWMY TH_1907|M.thermoresistible__bu ----------------AFADSVGAVVMGAATYEWVLR-----NQPGEWMH MMAR_2852|M.marinum_M ----------------LVPTEATVMVEGSTTYQWVIETESILDHPEKWQQ MUL_2905|M.ulcerans_Agy99 ----------------LVPTEATVMVEGSTTYQWVIETESILDHPEKWQQ MSMEG_3449|M.smegmatis_MC2_155 RTDSGGSRGLDDYFTRDFANNIGAEIMGRNKFSPHRGPWADHEWRGWWGD Mvan_1260|M.vanbaalenii_PYR-1 RTEPGGTRGLDDYFTRDFSHNIGAEIMGRNKFSPHRGPWRDHEWQGWWGD . . : * .:. : * Mflv_0431|M.gilvum_PYR-GCK TQ----PSWVVTHR--PDIVAADHPVRTFAGDVVDLHPTLLDAAAGRNVW TH_1907|M.thermoresistible__bu EQ----PSWVLTHR--PQIIAEAHPVRTFSGDVAELHPELVRAAGDKDVW MMAR_2852|M.marinum_M FYGDK-PTFVFTTR--ELPVPAGADVRFVSGSVLDVLPTIEEAAGAGDIW MUL_2905|M.ulcerans_Agy99 FYGDK-PTFVFTTR--ELPVPAGADVRFVSGSVLDVLPTIEEAAGAGDIW MSMEG_3449|M.smegmatis_MC2_155 EPPFHTPVFVLTHHPRPSFTLSDTTFHFIDADPHTALRLARKAAQGKDVR Mvan_1260|M.vanbaalenii_PYR-1 EPPFHTPVFVMTHHERPSFTLSDTTFHFITADPVTVATRAKEAAAGKDVR * :*.* : .: . .. ** :: Mflv_0431|M.gilvum_PYR-GCK VVGGGDLARQFAAAGLIDEMIVSYAP-CTLGAGSPVLP----MRSEWTLQ TH_1907|M.thermoresistible__bu VVGGGEVAAQFVAAGLVDDVIIGYAP-CTLGAGAPVLP----QRSEWTLV MMAR_2852|M.marinum_M VVGGGDLAGQFLDAGALDEIRLSVAP-VALAGGAPLLPRC-IGADRLRLV MUL_2905|M.ulcerans_Agy99 VVGGGDLAGQFLDAGALDEIRSSVAP-VALAGGAPLLPRC-IGADRLRLV MSMEG_3449|M.smegmatis_MC2_155 LGGGASTVREFLDAGLIDTLHVAVSPAVTIGSGSRLWETPEELLDRYHLE Mvan_1260|M.vanbaalenii_PYR-1 LGGGAATIRQFLDADLVDTLHVAVSPDVEIGSGSRLWKSPDELDDRFHHE : **. :* *. :* : . :* :..*: : .. Mflv_0431|M.gilvum_PYR-GCK TCAANADFVCAHWRRV--- TH_1907|M.thermoresistible__bu DSGVNGEFLCARWSRSAGS MMAR_2852|M.marinum_M SAAAHGQFARLVYTVTSPE MUL_2905|M.ulcerans_Agy99 SAAAHGQFARLVYTVTSPE MSMEG_3449|M.smegmatis_MC2_155 VVPSSSGVLHHLFWRR--- Mvan_1260|M.vanbaalenii_PYR-1 VVPSPSGVTHHLFWRR--- . . :