For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VVQLLKVQNFNVSGDGFGAGVDQSFERPFGHIDPSSMFAWCGATASWPNRTEPGGTRGLDDYFTRDFSHN IGAEIMGRNKFSPHRGPWRDHEWQGWWGDEPPFHTPVFVMTHHERPSFTLSDTTFHFITADPVTVATRAK EAAAGKDVRLGGGAATIRQFLDADLVDTLHVAVSPDVEIGSGSRLWKSPDELDDRFHHEVVPSPSGVTHH LFWRR
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_1260 | - | - | 100% (215) | DNA-binding protein |
| M. vanbaalenii PYR-1 | Mvan_0237 | - | 8e-07 | 30.25% (119) | bifunctional deaminase-reductase-like protein |
| M. vanbaalenii PYR-1 | Mvan_4641 | - | 3e-05 | 27.97% (118) | deaminase-reductase domain-containing protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_0431 | - | 2e-06 | 29.91% (117) | bifunctional deaminase-reductase-like protein |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | MMAR_2852 | - | 3e-06 | 32.65% (98) | hypothetical protein MMAR_2852 |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_3449 | - | 1e-105 | 79.53% (215) | DNA-binding protein |
| M. thermoresistible (build 8) | TH_1907 | - | 9e-05 | 27.73% (119) | dihydrofolate reductase |
| M. ulcerans Agy99 | MUL_2905 | - | 5e-06 | 32.65% (98) | hypothetical protein MUL_2905 |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_0431|M.gilvum_PYR-GCK ---MSTIYYTASSLDGYIVDDHGSLDWLTSRAIDADGPFGIE--------
TH_1907|M.thermoresistible__bu -LIMATVYFTAASLDGFIVDDHDSLDWLVTRDIDPDGPFGYR--------
MMAR_2852|M.marinum_M --MGQIVFDTATTLNGWIADENNSLAWLFA--VDQGGLPESG--------
MUL_2905|M.ulcerans_Agy99 --MGQIVFDTATTLNGWIADENNSLAWLFA--VDQGGLPESG--------
Mvan_1260|M.vanbaalenii_PYR-1 MVQLLKVQNFNVSGDGFGAGVDQSFERPFG-HIDPSSMFAWCGATASWPN
MSMEG_3449|M.smegmatis_MC2_155 MAQLLKVQNFNVSQDGFGAADNQCFERPFG-DVDPNRMFAWAGATASWPN
: : :*: . . .: :* .
Mflv_0431|M.gilvum_PYR-GCK ----------------PFMADIGSLVMGADTYEWILR-----NHPGEWMY
TH_1907|M.thermoresistible__bu ----------------AFADSVGAVVMGAATYEWVLR-----NQPGEWMH
MMAR_2852|M.marinum_M ----------------LVPTEATVMVEGSTTYQWVIETESILDHPEKWQQ
MUL_2905|M.ulcerans_Agy99 ----------------LVPTEATVMVEGSTTYQWVIETESILDHPEKWQQ
Mvan_1260|M.vanbaalenii_PYR-1 RTEPGGTRGLDDYFTRDFSHNIGAEIMGRNKFSPHRGPWRDHEWQGWWGD
MSMEG_3449|M.smegmatis_MC2_155 RTDSGGSRGLDDYFTRDFANNIGAEIMGRNKFSPHRGPWADHEWRGWWGD
. . : * .:. : *
Mflv_0431|M.gilvum_PYR-GCK TQ----PSWVVTHR--PDIVAADHPVRTFAGDVVDLHPTLLDAAAGRNVW
TH_1907|M.thermoresistible__bu EQ----PSWVLTHR--PQIIAEAHPVRTFSGDVAELHPELVRAAGDKDVW
MMAR_2852|M.marinum_M FYGDK-PTFVFTTR--ELPVPAGADVRFVSGSVLDVLPTIEEAAGAGDIW
MUL_2905|M.ulcerans_Agy99 FYGDK-PTFVFTTR--ELPVPAGADVRFVSGSVLDVLPTIEEAAGAGDIW
Mvan_1260|M.vanbaalenii_PYR-1 EPPFHTPVFVMTHHERPSFTLSDTTFHFITADPVTVATRAKEAAAGKDVR
MSMEG_3449|M.smegmatis_MC2_155 EPPFHTPVFVLTHHPRPSFTLSDTTFHFIDADPHTALRLARKAAQGKDVR
* :*.* : .: . .. ** ::
Mflv_0431|M.gilvum_PYR-GCK VVGGGDLARQFAAAGLIDEMIVSYAP-CTLGAGSPVLP----MRSEWTLQ
TH_1907|M.thermoresistible__bu VVGGGEVAAQFVAAGLVDDVIIGYAP-CTLGAGAPVLP----QRSEWTLV
MMAR_2852|M.marinum_M VVGGGDLAGQFLDAGALDEIRLSVAP-VALAGGAPLLPRC-IGADRLRLV
MUL_2905|M.ulcerans_Agy99 VVGGGDLAGQFLDAGALDEIRSSVAP-VALAGGAPLLPRC-IGADRLRLV
Mvan_1260|M.vanbaalenii_PYR-1 LGGGAATIRQFLDADLVDTLHVAVSPDVEIGSGSRLWKSPDELDDRFHHE
MSMEG_3449|M.smegmatis_MC2_155 LGGGASTVREFLDAGLIDTLHVAVSPAVTIGSGSRLWETPEELLDRYHLE
: **. :* *. :* : . :* :..*: : ..
Mflv_0431|M.gilvum_PYR-GCK TCAANADFVCAHWRRV---
TH_1907|M.thermoresistible__bu DSGVNGEFLCARWSRSAGS
MMAR_2852|M.marinum_M SAAAHGQFARLVYTVTSPE
MUL_2905|M.ulcerans_Agy99 SAAAHGQFARLVYTVTSPE
Mvan_1260|M.vanbaalenii_PYR-1 VVPSPSGVTHHLFWRR---
MSMEG_3449|M.smegmatis_MC2_155 VVPSSSGVLHHLFWRR---
. . :