For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
RAVTQLAHPDIADVKLTDVLFALSDPARLAIVRELANGPLAMAECSTVNPDLPKSTKSHLMKVLREAGII RNEPDGRKRILTLRRAELDEAFPGLLDAILDSSADDESPVT*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_3372 | - | - | 100% (112) | transcriptional regulator, ArsR family protein |
M. smegmatis MC2 155 | MSMEG_4175 | - | 4e-08 | 37.31% (67) | transcriptional regulator, ArsR family protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2060 | - | 9e-07 | 34.74% (95) | ArsR-type repressor protein |
M. gilvum PYR-GCK | Mflv_1660 | - | 4e-06 | 36.25% (80) | protein tyrosine phosphatase |
M. tuberculosis H37Rv | Rv2034 | - | 9e-07 | 34.74% (95) | ArsR-type repressor protein |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_4426 | - | 7e-06 | 30.14% (73) | ArsR family transcriptional regulator |
M. marinum M | MMAR_2139 | - | 4e-07 | 40.79% (76) | transcriptional regulatory protein |
M. avium 104 | MAV_2783 | - | 2e-05 | 36.11% (72) | ArsR family protein transcriptional regulator |
M. thermoresistible (build 8) | TH_0041 | - | 2e-07 | 35.82% (67) | transcriptional regulator, ArsR family protein |
M. ulcerans Agy99 | MUL_2937 | - | 1e-05 | 34.72% (72) | ArsR-type repressor |
M. vanbaalenii PYR-1 | Mvan_5328 | - | 5e-10 | 39.58% (96) | regulatory protein, ArsR |
CLUSTAL 2.0.9 multiple sequence alignment Mb2060|M.bovis_AF2122/97 --------------MSTYRSP-DRAWQALADGTRRAIVERLAHGPLAVGE Rv2034|M.tuberculosis_H37Rv --------------MSTYRSP-DRAWQALADGTRRAIVERLAHGPLAVGE MAV_2783|M.avium_104 --------------MVVVTGV-DRVFLALANPVRRELLQLLARHPLSAGE MUL_2937|M.ulcerans_Agy99 --------------MCTPERICDRIFVALASPVRRKLLEILTGRPLSAGE MAB_4426|M.abscessus_ATCC_1997 ----------------------MDAFEAIAEPSRRVLLDALAGGEWTAGD TH_0041|M.thermoresistible__bu ----------------------VDVFEAIAEPNRRALLDALTEGERTAGE MMAR_2139|M.marinum_M MPMKIADDAPPTASPREDLAGAVALFHSLSDPTRLAIARRLADGERRVVD MSMEG_3372|M.smegmatis_MC2_155 -----MRAVTQLAHPDIADVKLTDVLFALSDPARLAIVRELANGPLAMAE Mvan_5328|M.vanbaalenii_PYR-1 ----MAAEALVGDPSAHPVAPLQQVLAAIHDPVRLEIVRRLHNAG-GPMQ Mflv_1660|M.gilvum_PYR-GCK ----------MFTDSTGDSGRRAAVFAALADPVRLAIVDHLLLADAAPSE :: . * : * : Mb2060|M.bovis_AF2122/97 LARDLP-VSRPAVSQHLKVLKTARLVCD---RPAGTRRVYQLDPTGLAAL Rv2034|M.tuberculosis_H37Rv LARDLP-VSRPAVSQHLKVLKTARLVCD---RPAGTRRVYQLDPTGLAAL MAV_2783|M.avium_104 LSERFE-LSRPAVAEHLKVLREAALVAD---ERRGRQRIYHLTAEPLAEL MUL_2937|M.ulcerans_Agy99 LSDRFE-LSRPAIAEHLKVLREAGLVSD---EAQGRRRIYRLTAEPLAEL MAB_4426|M.abscessus_ATCC_1997 LVATLPGLTQPTVSRHLRVLRDIGLVDV---RPDAQRRVYALRPHGLREI TH_0041|M.thermoresistible__bu LAATLPGLTQPTVSRHLRVLREVGLVEV---RPDAQRRIYALRADGLIAI MMAR_2139|M.marinum_M LTRELG-LPQSTVSSHLACLRDCGLIAG---RPEGRQVFYALAVPDLLDL MSMEG_3372|M.smegmatis_MC2_155 CSTVNPDLPKSTKSHLMKVLREAGIIRN---EPDGRKRILTLRRAELDEA Mvan_5328|M.vanbaalenii_PYR-1 CGALYDGINKSTATHHFKVLREAGVTER---LVIDGLTYQRLRREQVGAA Mflv_1660|M.gilvum_PYR-GCK LGAVLD-VRSNLLAHHLNQLKKSGLVRQSRSEADGRRSYLSLNREVLETL : : : *: : * : Mb2060|M.bovis_AF2122/97 ---RTDLDRFWTRALTGYAQLIDSEGDDT--------------------- Rv2034|M.tuberculosis_H37Rv ---RTDLDRFWTRALTGYAQLIDSEGDDT--------------------- MAV_2783|M.avium_104 GEWLHPFEKFWRTRLRRLAEVAEELE------------------------ MUL_2937|M.ulcerans_Agy99 GEWLHPFEKLWREKLSALAEAAEEQQ------------------------ MAB_4426|M.abscessus_ATCC_1997 DQWIDPYRHFWN------E------------------------------- TH_0041|M.thermoresistible__bu DTWIDRYRRYWAGRLDALERHLHETHRDETNREDR--------------- MMAR_2139|M.marinum_M FAAAETVLAATGNAVTLCPNYGTRPTRASASRRRGVKRAAPGVADWSPGR MSMEG_3372|M.smegmatis_MC2_155 ------FPGLLDAILDSSADDESPVT------------------------ Mvan_5328|M.vanbaalenii_PYR-1 ------IPGLLESVVAGANREAGLS------------------------- Mflv_1660|M.gilvum_PYR-GCK VPRLESQAQRVVFVCTQNSARSQLAAAIWNRRSELPATSAGTHPAARVHP Mb2060|M.bovis_AF2122/97 -------------------------------------------------- Rv2034|M.tuberculosis_H37Rv -------------------------------------------------- MAV_2783|M.avium_104 -------------------------------------------------- MUL_2937|M.ulcerans_Agy99 -------------------------------------------------- MAB_4426|M.abscessus_ATCC_1997 -------------------------------------------------- TH_0041|M.thermoresistible__bu -------------------------------------------------- MMAR_2139|M.marinum_M -------------------------------------------------- MSMEG_3372|M.smegmatis_MC2_155 -------------------------------------------------- Mvan_5328|M.vanbaalenii_PYR-1 -------------------------------------------------- Mflv_1660|M.gilvum_PYR-GCK GAVAAAQRHKLHLRPHTPRYLGDVLAAGDLVIAVCDSAHEELPIELARLH Mb2060|M.bovis_AF2122/97 ------------------------------------ Rv2034|M.tuberculosis_H37Rv ------------------------------------ MAV_2783|M.avium_104 ------------------------------------ MUL_2937|M.ulcerans_Agy99 ------------------------------------ MAB_4426|M.abscessus_ATCC_1997 ------------------------------------ TH_0041|M.thermoresistible__bu ------------------------------------ MMAR_2139|M.marinum_M ------------------------------------ MSMEG_3372|M.smegmatis_MC2_155 ------------------------------------ Mvan_5328|M.vanbaalenii_PYR-1 ------------------------------------ Mflv_1660|M.gilvum_PYR-GCK WSVADPARTARAEAFDAAVGELTERINHLVPNLKSA