For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MPMKIADDAPPTASPREDLAGAVALFHSLSDPTRLAIARRLADGERRVVDLTRELGLPQSTVSSHLACLR DCGLIAGRPEGRQVFYALAVPDLLDLFAAAETVLAATGNAVTLCPNYGTRPTRASASRRRGVKRAAPGVA DWSPGR
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. marinum M | MMAR_2139 | - | - | 100% (146) | transcriptional regulatory protein |
| M. marinum M | MMAR_3668 | - | 6e-12 | 42.31% (78) | ArsR family transcriptional regulator |
| M. marinum M | MMAR_1653 | - | 3e-08 | 32.91% (79) | transcriptional regulatory protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2017c | - | 1e-11 | 41.18% (102) | transcriptional regulatory protein |
| M. gilvum PYR-GCK | Mflv_3178 | - | 1e-41 | 75.70% (107) | regulatory protein, ArsR |
| M. tuberculosis H37Rv | Rv1994c | - | 1e-11 | 41.18% (102) | transcriptional regulatory protein |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_4854c | - | 2e-34 | 64.35% (115) | ArsR family transcriptional regulator |
| M. avium 104 | MAV_2037 | - | 2e-11 | 41.77% (79) | transcriptional regulator, ArsR family protein |
| M. smegmatis MC2 155 | MSMEG_5603 | - | 2e-11 | 47.83% (69) | transcriptional regulator, ArsR family protein |
| M. thermoresistible (build 8) | TH_0837 | - | 1e-11 | 39.56% (91) | PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY |
| M. ulcerans Agy99 | MUL_3611 | - | 4e-12 | 42.31% (78) | ArsR family transcriptional regulator |
| M. vanbaalenii PYR-1 | Mvan_3640 | - | 7e-42 | 75.23% (109) | regulatory protein, ArsR |
CLUSTAL 2.0.9 multiple sequence alignment
Mb2017c|M.bovis_AF2122/97 ----------------------MLTCEMR---------------------
Rv1994c|M.tuberculosis_H37Rv ----------------------MLTCEMR---------------------
MSMEG_5603|M.smegmatis_MC2_155 -----------------------MQTALH---------------------
Mflv_3178|M.gilvum_PYR-GCK -------------------------MNKRDTCLAGNTS------------
Mvan_3640|M.vanbaalenii_PYR-1 -----------------------MTMNKADGCLAGTTSG---------SS
MAB_4854c|M.abscessus_ATCC_199 -------------------------MTIKGSVVQSFAP-----------V
MMAR_2139|M.marinum_M -----------------------MPMKIADDAPPTASP----------RE
MAV_2037|M.avium_104 MTMSPSPASMPAATDGDMGPEPGLPAHDHDGLAAAGHPGPADYPVPPPRD
MUL_3611|M.ulcerans_Agy99 MATSPSPS--TAAHD-DF-----VSRHEHDVGDFAEHP---AFPAPPPRE
TH_0837|M.thermoresistible__bu MKTISDFA--SAEPS--------VAHGHHHGVPPSELP---------PRA
Mb2017c|M.bovis_AF2122/97 -ESALARLGRALADPTRCRILVALLDGVCYPGQLAAHLGLTRSNVSNHLS
Rv1994c|M.tuberculosis_H37Rv -ESALARLGRALADPTRCRILVALLDGVCYPGQLAAHLGLTRSNVSNHLS
MSMEG_5603|M.smegmatis_MC2_155 -TDALARFGHALSDVTRTRILLSLNESPNYPADLAEQLGVSRQTLSNHLA
Mflv_3178|M.gilvum_PYR-GCK DLDAAVALFHSLSDATRLTIVRRLADGEARVVDLIGELGLAQSTVSAHVA
Mvan_3640|M.vanbaalenii_PYR-1 NLDAAVALFHSLSDSARLAIVRRLADGEARVVDLIGELGLAQSTVSAHVA
MAB_4854c|M.abscessus_ATCC_199 SLQAASALFHSLSDETRLAILRRLACGEARVVDLTGELGLAQSTVSAHLG
MMAR_2139|M.marinum_M DLAGAVALFHSLSDPTRLAIARRLADGERRVVDLTRELGLPQSTVSSHLA
MAV_2037|M.avium_104 ILDAAGELLRALAAPVRIAIVLQLRQSHRCVHELVDALGVPQPLVSQHLK
MUL_3611|M.ulcerans_Agy99 ILEGAGELLRALAAPVRIAIVLQLREAQRCVHELVDALGVPQPLVSQHLK
TH_0837|M.thermoresistible__bu VLETAGDLLRALAAPVRIAIVLQLRGATRCVHELVDALGVPQPLVSQHLR
: ::*: .* * * . :* **:.: :* *:
Mb2017c|M.bovis_AF2122/97 CLRGCGLVVATYEGRQVRYALADSHLARALGELVQVVLAVD---TDQPCV
Rv1994c|M.tuberculosis_H37Rv CLRGCGLVVATYEGRQVRYALADSHLARALGELVQVVLAVD---TDQPCV
MSMEG_5603|M.smegmatis_MC2_155 CLRGCGLVVAVPEGRRTRYELADARIGRALDDLMGLVLDVD---PECRCV
Mflv_3178|M.gilvum_PYR-GCK CLRDCGLVTGRPEGRQVFYSLSRPELLDVLAAAETLLAATGNAVALCPTY
Mvan_3640|M.vanbaalenii_PYR-1 CLRDCGLVTGRPEGRQVFYSLTRPELLDLLASAETLLAATGNAVALCPTY
MAB_4854c|M.abscessus_ATCC_199 CLRECGLVDYRPQGRSSVYRLARPEVLAVFTAAEDLLAATGNAVALCPNY
MMAR_2139|M.marinum_M CLRDCGLIAGRPEGRQVFYALAVPDLLDLFAAAETVLAATGNAVTLCPNY
MAV_2037|M.avium_104 ILKAAGVVAGERSGREVLYRLADHHLAHIVVDAVAHAGEEPRP-------
MUL_3611|M.ulcerans_Agy99 ILKAAGVVTGERSGREVLYRLVDQHLAHIVVDAVAHAGEDSA--------
TH_0837|M.thermoresistible__bu ILKAAGVVAGERSGREVMYRLVDEHLVDIVVAAVSHAGEGEP--------
*: .*:: .** * * : .
Mb2017c|M.bovis_AF2122/97 AERAASGEAVEMTGS--------------
Rv1994c|M.tuberculosis_H37Rv AERAASGEAVEMTGS--------------
MSMEG_5603|M.smegmatis_MC2_155 GP----DGAVCGCG---------------
Mflv_3178|M.gilvum_PYR-GCK GTGAR-GAAIDTEETRQ------------
Mvan_3640|M.vanbaalenii_PYR-1 GTRARTGATTDTKESL-------------
MAB_4854c|M.abscessus_ATCC_199 GHPDG-HPETKRKVVR-------------
MMAR_2139|M.marinum_M GTRPTRASASRRRGVKRAAPGVADWSPGR
MAV_2037|M.avium_104 -----------------------------
MUL_3611|M.ulcerans_Agy99 -----------------------------
TH_0837|M.thermoresistible__bu -----------------------------