For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_0041 | - | - | 100% (111) | transcriptional regulator, ArsR family protein |
| M. thermoresistible (build 8) | TH_2906 | - | 1e-14 | 38.95% (95) | PUTATIVE transcriptional regulator, ArsR family |
| M. thermoresistible (build 8) | TH_3423 | - | 5e-07 | 29.03% (93) | PUTATIVE - |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2060 | - | 3e-12 | 43.04% (79) | ArsR-type repressor protein |
| M. gilvum PYR-GCK | Mflv_3234 | - | 2e-12 | 37.36% (91) | regulatory protein, ArsR |
| M. tuberculosis H37Rv | Rv2034 | - | 3e-12 | 43.04% (79) | ArsR-type repressor protein |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_4426 | - | 7e-34 | 75.58% (86) | ArsR family transcriptional regulator |
| M. marinum M | MMAR_2816 | - | 2e-14 | 39.18% (97) | ArsR-type repressor |
| M. avium 104 | MAV_2783 | - | 4e-12 | 39.56% (91) | ArsR family protein transcriptional regulator |
| M. smegmatis MC2 155 | MSMEG_4175 | - | 2e-45 | 82.52% (103) | transcriptional regulator, ArsR family protein |
| M. ulcerans Agy99 | MUL_2937 | - | 2e-14 | 39.18% (97) | ArsR-type repressor |
| M. vanbaalenii PYR-1 | Mvan_0693 | - | 2e-13 | 38.38% (99) | regulatory protein, ArsR |
CLUSTAL 2.0.9 multiple sequence alignment
TH_0041|M.thermoresistible__bu -------------------------VDVFEAIAEPNRRALLDALTEGERT
MSMEG_4175|M.smegmatis_MC2_155 -------------------------MDVFEAIAEPSRRALLDALVDGERT
MAB_4426|M.abscessus_ATCC_1997 -------------------------MDAFEAIAEPSRRVLLDALAGGEWT
MMAR_2816|M.marinum_M -----------------MCTPERICDRIFVALASPVRRKLLEILTGQPLS
MUL_2937|M.ulcerans_Agy99 -----------------MCTPERICDRIFVALASPVRRKLLEILTGRPLS
MAV_2783|M.avium_104 -----------------MVVVTGV-DRVFLALANPVRRELLQLLARHPLS
Mb2060|M.bovis_AF2122/97 -----------------MSTYRSP-DRAWQALADGTRRAIVERLAHGPLA
Rv2034|M.tuberculosis_H37Rv -----------------MSTYRSP-DRAWQALADGTRRAIVERLAHGPLA
Mflv_3234|M.gilvum_PYR-GCK MAAGTRGTTYSLTGICQASRFGGMQSSVFAALGEPSRLRMVELLRTGPLS
Mvan_0693|M.vanbaalenii_PYR-1 ------------------MVEDLVLDRAYAALADPTRRRLLEALRTGDAR
: *:.. * ::: *
TH_0041|M.thermoresistible__bu AGELAATLPGLTQPTVSRHLRVLREVGLVEVRPDAQRRIYALRADGLIAI
MSMEG_4175|M.smegmatis_MC2_155 AGELVATLPELTQPTVSRHLKVLREVGLVEVRPDAQRRIYALRADGLMQI
MAB_4426|M.abscessus_ATCC_1997 AGDLVATLPGLTQPTVSRHLRVLRDIGLVDVRPDAQRRVYALRPHGLREI
MMAR_2816|M.marinum_M AGELSDRFE-LSRPAIAEHLKVLREAGLVSDEAQGRRRIYRLTAEPLAEL
MUL_2937|M.ulcerans_Agy99 AGELSDRFE-LSRPAIAEHLKVLREAGLVSDEAQGRRRIYRLTAEPLAEL
MAV_2783|M.avium_104 AGELSERFE-LSRPAVAEHLKVLREAALVADERRGRQRIYHLTAEPLAEL
Mb2060|M.bovis_AF2122/97 VGELARDLP-VSRPAVSQHLKVLKTARLVCDRPAGTRRVYQLDPTGLAAL
Rv2034|M.tuberculosis_H37Rv VGELARDLP-VSRPAVSQHLKVLKTARLVCDRPAGTRRVYQLDPTGLAAL
Mflv_3234|M.gilvum_PYR-GCK VGEIAEKLE-IRQPQVSKHLRILGDSGIVSVEALARKRIYHLIPEPFEQI
Mvan_0693|M.vanbaalenii_PYR-1 ITDLAAPLP-MTFAGVSRHIGVLESAGLVRREVRGREHWLSLQPDGLSDA
:: : : . ::.*: :* :* . . .: * . :
TH_0041|M.thermoresistible__bu DTWIDRYRRYWAGRLDALERHLHETHRDETNREDR
MSMEG_4175|M.smegmatis_MC2_155 DRWIERYRRHWIDHLDALERHLESTHKEAK-----
MAB_4426|M.abscessus_ATCC_1997 DQWIDPYRHFWNE----------------------
MMAR_2816|M.marinum_M GEWLHPFEKLWRDKLSALAETAEEQQ---------
MUL_2937|M.ulcerans_Agy99 GEWLHPFEKLWREKLSALAEAAEEQQ---------
MAV_2783|M.avium_104 GEWLHPFEKFWRTRLRRLAEVAEELE---------
Mb2060|M.bovis_AF2122/97 ---RTDLDRFWTRALTGYAQLIDSEGDDT------
Rv2034|M.tuberculosis_H37Rv ---RTDLDRFWTRALTGYAQLIDSEGDDT------
Mflv_3234|M.gilvum_PYR-GCK AQWTESFETLWEVRMDSLGTFLDSITDDND-----
Mvan_0693|M.vanbaalenii_PYR-1 RRWMDEQTEFWSARADALSERLRKKARGR------
*