For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. smegmatis MC2 155 MSMEG_3277 (-)

annotation: polyamine ABC transporter integral membrane protein
coordinates: 3359563 - 3360411
length: 282

TTAAMAEATDATAEPTVVKGNRRWGDAGLRIVAGLVLLYLFLPIFVIVLFSFNKPAGKFNYTWQGFTLDN
WKDPFKYPALTEALKLSLNVAAVSTSIALIFGTLVAIALVRQRWRGQRAVDTFLVLPLTAPEVVMGASLL
TLFLDLNWAAGYSTIVIAHIAFQISFIAMTVRARVRGFDWTLEDASMDLGASPTRTFFRVTLPLIVPGIV
AAAMLSFALSLDDFIITYFVSGSTVTYPLYVNAAVKAAVPPQINVLATAILVISLLLLAAGTLYRRKRID
V*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. smegmatis MC2 155MSMEG_3277--100% (282)polyamine ABC transporter integral membrane protein
M. smegmatis MC2 155MSMEG_4764-2e-3836.44% (247) ABC transporter permease protein
M. smegmatis MC2 155MSMEG_0658-1e-3435.77% (260) polyamine ABC-transporter, inner membrane subunit

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb1889modB5e-2031.73% (208) molbdenum-transport integral membrane protein ABC MODB
M. gilvum PYR-GCKMflv_3135-1e-13484.21% (285) binding-protein-dependent transport systems inner membrane
M. tuberculosis H37RvRv1858modB5e-2031.73% (208) molbdenum-transport integral membrane protein ABC
M. leprae Br4923MLBr_01088-6e-1624.31% (255) putative ABC-transport protein, inner membrane component
M. abscessus ATCC 19977MAB_1374-1e-2025.58% (258) sugar ABC transporter, permease protein SugB
M. marinum MMMAR_2732modB3e-1931.71% (205) molybdenum-transport integral membrane protein ABC
M. avium 104MAV_2861modB3e-2133.64% (214) molybdate ABC transporter, permease protein
M. thermoresistible (build 8)TH_3819-7e-2030.95% (210) PUTATIVE NifC-like ABC-type porter
M. ulcerans Agy99MUL_3021modB2e-1932.20% (205) molybdenum-transport integral membrane protein ABC
M. vanbaalenii PYR-1Mvan_3390-1e-13282.98% (282) binding-protein-dependent transport systems inner membrane

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_3135|M.gilvum_PYR-GCK          MTTQAGAALATAAQQDPAPKKVRTGPNWGDLLLRVAAGLVLLYLFLPIFV
Mvan_3390|M.vanbaalenii_PYR-1       MTTQAGAAIATAAQHDPKPKKVRGRTNWGDLALKMVAGLVLLYLFLPIFV
MSMEG_3277|M.smegmatis_MC2_155      MTT---AAMAEATDATAEPTVVKGNRRWGDAGLRIVAGLVLLYLFLPIFV
Mb1889|M.bovis_AF2122/97            --------------------------------MHPPTDLPRWVYLPAIAG
Rv1858|M.tuberculosis_H37Rv         --------------------------------MHPPTDLPRWVYLPAIAG
MAV_2861|M.avium_104                ------------------------------------------MYLPAAAG
MMAR_2732|M.marinum_M               --------------------------------MHGPTELPRWVYLPATAG
MUL_3021|M.ulcerans_Agy99           --------------------------------MHGPPELPRWVYLPATAG
TH_3819|M.thermoresistible__bu      --------------------------------MNAST-LPRWIYLPAAVG
MLBr_01088|M.leprae_Br4923          ----------MGIEKVKVTAGVRVGARRATIWVIIDTFVVGYALLPVLWI
MAB_1374|M.abscessus_ATCC_1997      ----------MSRPDSSRTAG----------WLIADVLVLCYALVPVLWV
                                                                                .     

Mflv_3135|M.gilvum_PYR-GCK          IILFSFNKPAGKFNYSWQGFT-LDNWLDPFKYPALTEALKLSLNVAAVST
Mvan_3390|M.vanbaalenii_PYR-1       IVLFSFNKPAGKFNYTWQGFT-LENWLDPFKYPPLTEALKLSLNVAAVST
MSMEG_3277|M.smegmatis_MC2_155      IVLFSFNKPAGKFNYTWQGFT-LDNWKDPFKYPALTEALKLSLNVAAVST
Mb1889|M.bovis_AF2122/97            IVFVAMPLVAIAIRVDWP------RFWALITTPSSQTALLLSVKTAAAST
Rv1858|M.tuberculosis_H37Rv         IVFVAMPLVAIAIRVDWP------RFWALITTPSSQTALLLSVKTAAAST
MAV_2861|M.avium_104                TMFVVLPLLAIAVKVDWP------HFWSLITSPSSRTALLLSLRTAAAST
MMAR_2732|M.marinum_M               MGLVILPLVAMAAKVDWP------NFWSLITSTSSRTALVLSLKTASAST
MUL_3021|M.ulcerans_Agy99           MGLVILPLVAMAAKVDWP------NFWSLITSTSSRTALVLSLKTASAST
TH_3819|M.thermoresistible__bu      ATLLALPVFALAGRVDWP------RFWSLICSESSMTALALSLRTATAST
MLBr_01088|M.leprae_Br4923          LSLSLKPASTVKDGKLIPSLVTFDNYRGIFRSDLFSSALINSIGIGLTTT
MAB_1374|M.abscessus_ATCC_1997      LSLSLKPTSSVKDGKFFPWPITLDNYRGIFSGNVFTSALVNSIGIGLIAT
                                      :      :              .:   :       **  *:  .  :*

Mflv_3135|M.gilvum_PYR-GCK          AVALVLGTLVAIALVRQRWRGQRAVDTFLILPLTAPEVVMGAALLTLFLD
Mvan_3390|M.vanbaalenii_PYR-1       AVALVLGTLVAIALVRQRWRGQRAVDTFLVIPLTAPEVVMGAALLTLFLD
MSMEG_3277|M.smegmatis_MC2_155      SIALIFGTLVAIALVRQRWRGQRAVDTFLVLPLTAPEVVMGASLLTLFLD
Mb1889|M.bovis_AF2122/97            VLCVLLGVPMALVLARSRGRLVRSLRPLILLPLVLPPVVGGIALLYAFGR
Rv1858|M.tuberculosis_H37Rv         VLCVLLGVPMALVLARSRGRLVRSLRPLILLPLVLPPVVGGIALLYAFGR
MAV_2861|M.avium_104                ALCVALGVPMALVLARGGTRLVRSLRPLILLPLVLPPVVGGIALLYAFGR
MMAR_2732|M.marinum_M               AICVLLGVPMALVLARSRARLMRLMRPLILLPLVLPPVVGGIALLYAFGR
MUL_3021|M.ulcerans_Agy99           AICVLLGVPTALVLARSRARLMRLMRPLILLPLVLPPVVGGIALLYAFGR
TH_3819|M.thermoresistible__bu      VLCLVLGVPMALALARGGSPILRWIRPLVLLPLVLPPVVGGIALLYAFGR
MLBr_01088|M.leprae_Br4923          VIAVMFGAMAAYAIARLAFPGKRLLVGTTLLVTMFPAISLVTPLFNIERR
MAB_1374|M.abscessus_ATCC_1997      VIAVSVGTMAAYAVARLDFPGKKALIGAALLIAMFPQISLVTPIFNIERS
                                     :.: .*.  * .:.*      : :    ::    * :    .::     

Mflv_3135|M.gilvum_PYR-GCK          FNTAAGY------------TTIVLSHIAFEVSFIAMTVRARVRGFDWTLE
Mvan_3390|M.vanbaalenii_PYR-1       LSWPAGY------------TTILLSHIAFEVSFIAMTVRARVRGFDWTLE
MSMEG_3277|M.smegmatis_MC2_155      LNWAAGY------------STIVIAHIAFQISFIAMTVRARVRGFDWTLE
Mb1889|M.bovis_AF2122/97            LGLIGRYLEAAGISIAFSTAAVVLAQTFVSLPYLVISLEGAARTAGADYE
Rv1858|M.tuberculosis_H37Rv         LGLIGRYLEAAGISIAFSTAAVVLAQTFVSLPYLVISLEGAARTAGADYE
MAV_2861|M.avium_104                LGLLGHYLEAAGISVAFSTTAVVLAQTFVSLPFLVISLEGAARTAGADFE
MMAR_2732|M.marinum_M               LGLIGRYLEAGGITIAFSTTAVVLAQTFVSLPFLVVSLEGAARTAGADYE
MUL_3021|M.ulcerans_Agy99           LGLIGRYLEAGGITIAFSTTAVVLAQTFVSLPFLVVPLEGAARTAGADYE
TH_3819|M.thermoresistible__bu      MGLIGGYLEAVGIQIAFSTTAVVLAQTFVSLPFLVLALEGAARTAGTGYE
MLBr_01088|M.leprae_Br4923          VGLFDTW------------AGLILPYITFALPLAIYTLSAFFAEIPWDLE
MAB_1374|M.abscessus_ATCC_1997      VGLFDTW------------PGLIIPYITFALPLAIYTLSAFFREIPWELE
                                    ..    :            . :::.   . :.    .: .         *

Mflv_3135|M.gilvum_PYR-GCK          DASLDLGASPTRTFFKVTLPLIVPGIVAAAMLSFALSLDDFIITYFVSGS
Mvan_3390|M.vanbaalenii_PYR-1       DASLDLGAGPARTFFKVTLPLIVPGIVAAAMLSFALSLDDFIITYFVSGA
MSMEG_3277|M.smegmatis_MC2_155      DASMDLGASPTRTFFRVTLPLIVPGIVAAAMLSFALSLDDFIITYFVSGS
Mb1889|M.bovis_AF2122/97            VVAATLGARPGTVWWRVTLPLLLPGVVSGSVLAFARSLGEFGATLTFAGS
Rv1858|M.tuberculosis_H37Rv         VVAATLGARPGTVWWRVTLPLLLPGVVSGSVLAFARSLGEFGATLTFAGS
MAV_2861|M.avium_104                VVAATLGARPTTVWWRVTLPLLLPGVVSGAVLAFARSLGEFGATLTFAGS
MMAR_2732|M.marinum_M               VVAATLGARPSAVWWKVTLPLLMPGLVSGAVLAFARALGEFGATLTFAGS
MUL_3021|M.ulcerans_Agy99           VVAATLGARPSAVWWKVTLPLLMPGLVSGAVLAFARSLGEFGATLTFAGS
TH_3819|M.thermoresistible__bu      VVAATLGATPTTVWWRVTLPLLAPGLVSGAVLAFARALGEFGATLTFAGS
MLBr_01088|M.leprae_Br4923          KAAKMDGATSGQAFRKVIVPLAAPGLVTAAILVFIFAWNDLLLALSLTST
MAB_1374|M.abscessus_ATCC_1997      KAAKMDGATPAQAFWKVIAPLATPGIVTSAILVFIFAWNDLLLAISLTAT
                                     .:   ** .  .: :*  **  **:*:.::* *  : .::  :  .:.:

Mflv_3135|M.gilvum_PYR-GCK          E--VTYPLYVNAAVKA--AVPPQINVLATAILVVSLLLLAIGTLYRRKKI
Mvan_3390|M.vanbaalenii_PYR-1       E--VTYPLYVNAAVKA--AVPPQINVLATAILVVSLVLLAVSTLYRRKRF
MSMEG_3277|M.smegmatis_MC2_155      T--VTYPLYVNAAVKA--AVPPQINVLATAILVISLLLLAAGTLYRRKRI
Mb1889|M.bovis_AF2122/97            RQGVTRTLPLEIYLQR--VTDPDAAVALSLLLVVVAALVVLGVGARTPIG
Rv1858|M.tuberculosis_H37Rv         RQGVTRTLPLEIYLQR--VTDPDAAVALSLLLVVVAALVVLGVGARTPIG
MAV_2861|M.avium_104                RQGVTRTLPLEIYLQR--VTDADAAVALSILLVAVAAVVVLGLGARRLTG
MMAR_2732|M.marinum_M               RQGVTRTLPLEIYLQR--VNDPDAAIALSLLLVAVAALVVLSLGARRLTG
MUL_3021|M.ulcerans_Agy99           RQGVTRTLPLEIYLQR--VNDPDAAIALSLLLVAVAALVVLSLGARRLTG
TH_3819|M.thermoresistible__bu      RQGVTRTLPLEIYLQR--EADPEAAVALSMVLIAVAAVVVIGLGARRLRA
MLBr_01088|M.leprae_Br4923          KAAITAPVAITNFTGSSQFEEPTGSIAAGAIVITAPIIVFVWIFQRRIVA
MAB_1374|M.abscessus_ATCC_1997      DRSITAPVAIANFTGSSQFEEPTGSIAAGAIVITVPIIIFVLIFQRRIVA
                                       :* .: :           .   :    :::    ::      *    

Mflv_3135|M.gilvum_PYR-GCK          DI-------
Mvan_3390|M.vanbaalenii_PYR-1       AG-------
MSMEG_3277|M.smegmatis_MC2_155      DV-------
Mb1889|M.bovis_AF2122/97            TDTR-----
Rv1858|M.tuberculosis_H37Rv         TDTR-----
MAV_2861|M.avium_104                TDAR-----
MMAR_2732|M.marinum_M               GQAG-----
MUL_3021|M.ulcerans_Agy99           GQAG-----
TH_3819|M.thermoresistible__bu      GGWS-----
MLBr_01088|M.leprae_Br4923          GLTSGAVKG
MAB_1374|M.abscessus_ATCC_1997      GLTSGAVKG