For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TTAAMAEATDATAEPTVVKGNRRWGDAGLRIVAGLVLLYLFLPIFVIVLFSFNKPAGKFNYTWQGFTLDN WKDPFKYPALTEALKLSLNVAAVSTSIALIFGTLVAIALVRQRWRGQRAVDTFLVLPLTAPEVVMGASLL TLFLDLNWAAGYSTIVIAHIAFQISFIAMTVRARVRGFDWTLEDASMDLGASPTRTFFRVTLPLIVPGIV AAAMLSFALSLDDFIITYFVSGSTVTYPLYVNAAVKAAVPPQINVLATAILVISLLLLAAGTLYRRKRID V*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_3277 | - | - | 100% (282) | polyamine ABC transporter integral membrane protein |
M. smegmatis MC2 155 | MSMEG_4764 | - | 2e-38 | 36.44% (247) | ABC transporter permease protein |
M. smegmatis MC2 155 | MSMEG_0658 | - | 1e-34 | 35.77% (260) | polyamine ABC-transporter, inner membrane subunit |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1889 | modB | 5e-20 | 31.73% (208) | molbdenum-transport integral membrane protein ABC MODB |
M. gilvum PYR-GCK | Mflv_3135 | - | 1e-134 | 84.21% (285) | binding-protein-dependent transport systems inner membrane |
M. tuberculosis H37Rv | Rv1858 | modB | 5e-20 | 31.73% (208) | molbdenum-transport integral membrane protein ABC |
M. leprae Br4923 | MLBr_01088 | - | 6e-16 | 24.31% (255) | putative ABC-transport protein, inner membrane component |
M. abscessus ATCC 19977 | MAB_1374 | - | 1e-20 | 25.58% (258) | sugar ABC transporter, permease protein SugB |
M. marinum M | MMAR_2732 | modB | 3e-19 | 31.71% (205) | molybdenum-transport integral membrane protein ABC |
M. avium 104 | MAV_2861 | modB | 3e-21 | 33.64% (214) | molybdate ABC transporter, permease protein |
M. thermoresistible (build 8) | TH_3819 | - | 7e-20 | 30.95% (210) | PUTATIVE NifC-like ABC-type porter |
M. ulcerans Agy99 | MUL_3021 | modB | 2e-19 | 32.20% (205) | molybdenum-transport integral membrane protein ABC |
M. vanbaalenii PYR-1 | Mvan_3390 | - | 1e-132 | 82.98% (282) | binding-protein-dependent transport systems inner membrane |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_3135|M.gilvum_PYR-GCK MTTQAGAALATAAQQDPAPKKVRTGPNWGDLLLRVAAGLVLLYLFLPIFV Mvan_3390|M.vanbaalenii_PYR-1 MTTQAGAAIATAAQHDPKPKKVRGRTNWGDLALKMVAGLVLLYLFLPIFV MSMEG_3277|M.smegmatis_MC2_155 MTT---AAMAEATDATAEPTVVKGNRRWGDAGLRIVAGLVLLYLFLPIFV Mb1889|M.bovis_AF2122/97 --------------------------------MHPPTDLPRWVYLPAIAG Rv1858|M.tuberculosis_H37Rv --------------------------------MHPPTDLPRWVYLPAIAG MAV_2861|M.avium_104 ------------------------------------------MYLPAAAG MMAR_2732|M.marinum_M --------------------------------MHGPTELPRWVYLPATAG MUL_3021|M.ulcerans_Agy99 --------------------------------MHGPPELPRWVYLPATAG TH_3819|M.thermoresistible__bu --------------------------------MNAST-LPRWIYLPAAVG MLBr_01088|M.leprae_Br4923 ----------MGIEKVKVTAGVRVGARRATIWVIIDTFVVGYALLPVLWI MAB_1374|M.abscessus_ATCC_1997 ----------MSRPDSSRTAG----------WLIADVLVLCYALVPVLWV . Mflv_3135|M.gilvum_PYR-GCK IILFSFNKPAGKFNYSWQGFT-LDNWLDPFKYPALTEALKLSLNVAAVST Mvan_3390|M.vanbaalenii_PYR-1 IVLFSFNKPAGKFNYTWQGFT-LENWLDPFKYPPLTEALKLSLNVAAVST MSMEG_3277|M.smegmatis_MC2_155 IVLFSFNKPAGKFNYTWQGFT-LDNWKDPFKYPALTEALKLSLNVAAVST Mb1889|M.bovis_AF2122/97 IVFVAMPLVAIAIRVDWP------RFWALITTPSSQTALLLSVKTAAAST Rv1858|M.tuberculosis_H37Rv IVFVAMPLVAIAIRVDWP------RFWALITTPSSQTALLLSVKTAAAST MAV_2861|M.avium_104 TMFVVLPLLAIAVKVDWP------HFWSLITSPSSRTALLLSLRTAAAST MMAR_2732|M.marinum_M MGLVILPLVAMAAKVDWP------NFWSLITSTSSRTALVLSLKTASAST MUL_3021|M.ulcerans_Agy99 MGLVILPLVAMAAKVDWP------NFWSLITSTSSRTALVLSLKTASAST TH_3819|M.thermoresistible__bu ATLLALPVFALAGRVDWP------RFWSLICSESSMTALALSLRTATAST MLBr_01088|M.leprae_Br4923 LSLSLKPASTVKDGKLIPSLVTFDNYRGIFRSDLFSSALINSIGIGLTTT MAB_1374|M.abscessus_ATCC_1997 LSLSLKPTSSVKDGKFFPWPITLDNYRGIFSGNVFTSALVNSIGIGLIAT : : .: : ** *: . :* Mflv_3135|M.gilvum_PYR-GCK AVALVLGTLVAIALVRQRWRGQRAVDTFLILPLTAPEVVMGAALLTLFLD Mvan_3390|M.vanbaalenii_PYR-1 AVALVLGTLVAIALVRQRWRGQRAVDTFLVIPLTAPEVVMGAALLTLFLD MSMEG_3277|M.smegmatis_MC2_155 SIALIFGTLVAIALVRQRWRGQRAVDTFLVLPLTAPEVVMGASLLTLFLD Mb1889|M.bovis_AF2122/97 VLCVLLGVPMALVLARSRGRLVRSLRPLILLPLVLPPVVGGIALLYAFGR Rv1858|M.tuberculosis_H37Rv VLCVLLGVPMALVLARSRGRLVRSLRPLILLPLVLPPVVGGIALLYAFGR MAV_2861|M.avium_104 ALCVALGVPMALVLARGGTRLVRSLRPLILLPLVLPPVVGGIALLYAFGR MMAR_2732|M.marinum_M AICVLLGVPMALVLARSRARLMRLMRPLILLPLVLPPVVGGIALLYAFGR MUL_3021|M.ulcerans_Agy99 AICVLLGVPTALVLARSRARLMRLMRPLILLPLVLPPVVGGIALLYAFGR TH_3819|M.thermoresistible__bu VLCLVLGVPMALALARGGSPILRWIRPLVLLPLVLPPVVGGIALLYAFGR MLBr_01088|M.leprae_Br4923 VIAVMFGAMAAYAIARLAFPGKRLLVGTTLLVTMFPAISLVTPLFNIERR MAB_1374|M.abscessus_ATCC_1997 VIAVSVGTMAAYAVARLDFPGKKALIGAALLIAMFPQISLVTPIFNIERS :.: .*. * .:.* : : :: * : .:: Mflv_3135|M.gilvum_PYR-GCK FNTAAGY------------TTIVLSHIAFEVSFIAMTVRARVRGFDWTLE Mvan_3390|M.vanbaalenii_PYR-1 LSWPAGY------------TTILLSHIAFEVSFIAMTVRARVRGFDWTLE MSMEG_3277|M.smegmatis_MC2_155 LNWAAGY------------STIVIAHIAFQISFIAMTVRARVRGFDWTLE Mb1889|M.bovis_AF2122/97 LGLIGRYLEAAGISIAFSTAAVVLAQTFVSLPYLVISLEGAARTAGADYE Rv1858|M.tuberculosis_H37Rv LGLIGRYLEAAGISIAFSTAAVVLAQTFVSLPYLVISLEGAARTAGADYE MAV_2861|M.avium_104 LGLLGHYLEAAGISVAFSTTAVVLAQTFVSLPFLVISLEGAARTAGADFE MMAR_2732|M.marinum_M LGLIGRYLEAGGITIAFSTTAVVLAQTFVSLPFLVVSLEGAARTAGADYE MUL_3021|M.ulcerans_Agy99 LGLIGRYLEAGGITIAFSTTAVVLAQTFVSLPFLVVPLEGAARTAGADYE TH_3819|M.thermoresistible__bu MGLIGGYLEAVGIQIAFSTTAVVLAQTFVSLPFLVLALEGAARTAGTGYE MLBr_01088|M.leprae_Br4923 VGLFDTW------------AGLILPYITFALPLAIYTLSAFFAEIPWDLE MAB_1374|M.abscessus_ATCC_1997 VGLFDTW------------PGLIIPYITFALPLAIYTLSAFFREIPWELE .. : . :::. . :. .: . * Mflv_3135|M.gilvum_PYR-GCK DASLDLGASPTRTFFKVTLPLIVPGIVAAAMLSFALSLDDFIITYFVSGS Mvan_3390|M.vanbaalenii_PYR-1 DASLDLGAGPARTFFKVTLPLIVPGIVAAAMLSFALSLDDFIITYFVSGA MSMEG_3277|M.smegmatis_MC2_155 DASMDLGASPTRTFFRVTLPLIVPGIVAAAMLSFALSLDDFIITYFVSGS Mb1889|M.bovis_AF2122/97 VVAATLGARPGTVWWRVTLPLLLPGVVSGSVLAFARSLGEFGATLTFAGS Rv1858|M.tuberculosis_H37Rv VVAATLGARPGTVWWRVTLPLLLPGVVSGSVLAFARSLGEFGATLTFAGS MAV_2861|M.avium_104 VVAATLGARPTTVWWRVTLPLLLPGVVSGAVLAFARSLGEFGATLTFAGS MMAR_2732|M.marinum_M VVAATLGARPSAVWWKVTLPLLMPGLVSGAVLAFARALGEFGATLTFAGS MUL_3021|M.ulcerans_Agy99 VVAATLGARPSAVWWKVTLPLLMPGLVSGAVLAFARSLGEFGATLTFAGS TH_3819|M.thermoresistible__bu VVAATLGATPTTVWWRVTLPLLAPGLVSGAVLAFARALGEFGATLTFAGS MLBr_01088|M.leprae_Br4923 KAAKMDGATSGQAFRKVIVPLAAPGLVTAAILVFIFAWNDLLLALSLTST MAB_1374|M.abscessus_ATCC_1997 KAAKMDGATPAQAFWKVIAPLATPGIVTSAILVFIFAWNDLLLAISLTAT .: ** . .: :* ** **:*:.::* * : .:: : .:.: Mflv_3135|M.gilvum_PYR-GCK E--VTYPLYVNAAVKA--AVPPQINVLATAILVVSLLLLAIGTLYRRKKI Mvan_3390|M.vanbaalenii_PYR-1 E--VTYPLYVNAAVKA--AVPPQINVLATAILVVSLVLLAVSTLYRRKRF MSMEG_3277|M.smegmatis_MC2_155 T--VTYPLYVNAAVKA--AVPPQINVLATAILVISLLLLAAGTLYRRKRI Mb1889|M.bovis_AF2122/97 RQGVTRTLPLEIYLQR--VTDPDAAVALSLLLVVVAALVVLGVGARTPIG Rv1858|M.tuberculosis_H37Rv RQGVTRTLPLEIYLQR--VTDPDAAVALSLLLVVVAALVVLGVGARTPIG MAV_2861|M.avium_104 RQGVTRTLPLEIYLQR--VTDADAAVALSILLVAVAAVVVLGLGARRLTG MMAR_2732|M.marinum_M RQGVTRTLPLEIYLQR--VNDPDAAIALSLLLVAVAALVVLSLGARRLTG MUL_3021|M.ulcerans_Agy99 RQGVTRTLPLEIYLQR--VNDPDAAIALSLLLVAVAALVVLSLGARRLTG TH_3819|M.thermoresistible__bu RQGVTRTLPLEIYLQR--EADPEAAVALSMVLIAVAAVVVIGLGARRLRA MLBr_01088|M.leprae_Br4923 KAAITAPVAITNFTGSSQFEEPTGSIAAGAIVITAPIIVFVWIFQRRIVA MAB_1374|M.abscessus_ATCC_1997 DRSITAPVAIANFTGSSQFEEPTGSIAAGAIVITVPIIIFVLIFQRRIVA :* .: : . : ::: :: * Mflv_3135|M.gilvum_PYR-GCK DI------- Mvan_3390|M.vanbaalenii_PYR-1 AG------- MSMEG_3277|M.smegmatis_MC2_155 DV------- Mb1889|M.bovis_AF2122/97 TDTR----- Rv1858|M.tuberculosis_H37Rv TDTR----- MAV_2861|M.avium_104 TDAR----- MMAR_2732|M.marinum_M GQAG----- MUL_3021|M.ulcerans_Agy99 GQAG----- TH_3819|M.thermoresistible__bu GGWS----- MLBr_01088|M.leprae_Br4923 GLTSGAVKG MAB_1374|M.abscessus_ATCC_1997 GLTSGAVKG