For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MVVRTLHPRLTRELRRPVDVAGRLGDHTSFYGRALAGTPHAAMHYRREVIRLIAEISMGAGTLAMIGGTV VIVGFLTLAAGGTLAVQGYSSLGNIGIEALTGFLAAFINVRISAPVVAGIGLAATFGAGVTAQLGAMRIN EEIDALESMGIRPVEYLVSTRIVAGMVAITPLYAVAVILSFAASNLTTVVMFGQSAGLYNHYFSTFLNPV DLLWSFLQAILMAIAILLVHTYFGFFAAGGPSGVGVAVGNAVRTSLIVVIAVTLLVSLAVYGSNGNFNLS G
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_2854 | - | - | 100% (281) | hypothetical protein MSMEG_2854 |
| M. smegmatis MC2 155 | MSMEG_4795 | - | e-135 | 84.64% (280) | ABC-transporter integral membrane protein |
| M. smegmatis MC2 155 | MSMEG_5901 | - | e-101 | 65.93% (273) | TrnB2 protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3530c | yrbE4B | 2e-99 | 64.10% (273) | integral membrane protein YrbE4b |
| M. gilvum PYR-GCK | Mflv_4539 | - | 1e-139 | 87.54% (281) | hypothetical protein Mflv_4539 |
| M. tuberculosis H37Rv | Rv3500c | yrbE4B | 2e-99 | 64.10% (273) | integral membrane protein YrbE4b |
| M. leprae Br4923 | MLBr_02588 | yrbE1B | 5e-80 | 51.59% (283) | hypothetical protein MLBr_02588 |
| M. abscessus ATCC 19977 | MAB_4154c | - | 2e-97 | 64.84% (273) | hypothetical protein MAB_4154c |
| M. marinum M | MMAR_4711 | - | 1e-132 | 81.85% (281) | hypothetical protein MMAR_4711 |
| M. avium 104 | MAV_0947 | - | 1e-127 | 79.00% (281) | TrnB2 protein |
| M. thermoresistible (build 8) | TH_0394 | - | 1e-134 | 85.41% (281) | CONSERVED HYPOTHETICAL INTEGRAL MEMBRANE PROTEIN YRBE4B |
| M. ulcerans Agy99 | MUL_4063 | yrbE4B | 1e-100 | 65.57% (273) | membrane protein YrbE4B |
| M. vanbaalenii PYR-1 | Mvan_2850 | - | 1e-140 | 88.53% (279) | hypothetical protein Mvan_2850 |
CLUSTAL 2.0.9 multiple sequence alignment
Mb3530c|M.bovis_AF2122/97 -MS------YDVTIRFRRFFSR----LQRPVDNFGEQALFYGETMRYVPN
Rv3500c|M.tuberculosis_H37Rv -MS------YDVTIRFRRFFSR----LQRPVDNFGEQALFYGETMRYVPN
MUL_4063|M.ulcerans_Agy99 -MS------YDLTVRFHRFMSR----LARPVDNLGEQALFYGETVRYIPN
MAB_4154c|M.abscessus_ATCC_199 -MSGPYLSTHTVTSYTVRYMRG----LGRSFDKFGEQALFYAQSLSYIPA
Mflv_4539|M.gilvum_PYR-GCK MVA-----IRTLHPQLVRRLGR----PVDTLGGIGEHTAFYGRALAGVPH
Mvan_2850|M.vanbaalenii_PYR-1 MAA-----VRALHPRLAQQIGR----PVGALGRIGDHTSFYGRALAGVPH
MSMEG_2854|M.smegmatis_MC2_155 -MV-----VRTLHPRLTRELRR----PVDVAGRLGDHTSFYGRALAGTPH
TH_0394|M.thermoresistible__bu -MT-----VQALYPRLVRTANR----PVDAVERLGEHTLFYLRALAGVPN
MMAR_4711|M.marinum_M -MA-----LRAVYPRMTRQLEK----PVGTLSRIGDHTLFYGKAIAGAPF
MAV_0947|M.avium_104 -MA-----LRAAYPRLTRQLER----PVALLAGIGDHALFYGKALAGMPF
MLBr_02588|M.leprae_Br4923 -MS-TAAVLRARFPRAAANLNRYGGAAARGIDDIGQMSWFGLIALGNIPN
:*: : * :: *
Mb3530c|M.bovis_AF2122/97 AITRYRKETVRLVAEMTLGAGALVMIGGTVGVAAFLTLASGGVIAVQGYS
Rv3500c|M.tuberculosis_H37Rv AITRYRKETVRLVAEMTLGAGALVMIGGTVGVAAFLTLASGGVIAVQGYS
MUL_4063|M.ulcerans_Agy99 ATTRYRKETIRLVAEMTLGAGALVMIGGTVGVAAFLTLASGGVIAVQGYS
MAB_4154c|M.abscessus_ATCC_199 ALTKYRKETIRVLAEITMGTGALVMIGGTVGVAVFLTLASGGVIAVQGYS
Mflv_4539|M.gilvum_PYR-GCK AVVHYRREIIRLVAEISMGAGTLAMIGGTVVIVGFLTLAAGGTLAVQGYS
Mvan_2850|M.vanbaalenii_PYR-1 AAMHYRKEIIRLVAEISMGAGTLAMIGGTIVIVGFLTLAAGGTLAVQGYS
MSMEG_2854|M.smegmatis_MC2_155 AAMHYRREVIRLIAEISMGAGTLAMIGGTVVIVGFLTLAAGGTLAVQGYS
TH_0394|M.thermoresistible__bu VIMHHRREIIRLIAEISMGAGTLAMIGGTVVVVGFLTLAAGGTLAVQGYS
MMAR_4711|M.marinum_M AATHYRREIIRLVAEISMGAGTLAMIGGTLVIVGFLTLAAGGTLAVQGYS
MAV_0947|M.avium_104 AATRYTREVVRLVAEISMGAGTLAMIGGTVVIVGFLTLAAGGTLAIQGYT
MLBr_02588|M.leprae_Br4923 ALSRYRKETLRLIAQIGMGTGAMAVVGGTAAIVGFVTLSGSSLVAIQGFA
. :: :* :*::*:: :*:*::.::*** :. *:**:... :*:**::
Mb3530c|M.bovis_AF2122/97 SLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAGATAQLGAMRVS
Rv3500c|M.tuberculosis_H37Rv SLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAGATAQLGAMRVS
MUL_4063|M.ulcerans_Agy99 SLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAGATAQLGAMRVS
MAB_4154c|M.abscessus_ATCC_199 SLGNIGIEALTGFLSAFLNVRIVAPVVAGIAMAATIGAGTTAQLGAMRVA
Mflv_4539|M.gilvum_PYR-GCK SLGDIGIEALTGFLAAFINVRISAPVVAGIGLAATFGAGVTAQLGAMRIN
Mvan_2850|M.vanbaalenii_PYR-1 SLGDIGIEALTGFLAAFINVRISAPVVAGIGLAATFGAGVTAQLGAMRIN
MSMEG_2854|M.smegmatis_MC2_155 SLGNIGIEALTGFLAAFINVRISAPVVAGIGLAATFGAGVTAQLGAMRIN
TH_0394|M.thermoresistible__bu SLGDIGIEALTGFLAAFINVRISAPVVAGIGLAATFGAGVTAQLGAMRIN
MMAR_4711|M.marinum_M SLGNIGIEALTGFLAAFINVRIAAPIVAGIGLAATFGAGVTAQLGAMRIN
MAV_0947|M.avium_104 SLGNIGIEALTGFLAAFINVRIAAPVVAGIGLAATFGAGVTAQLGAMRIN
MLBr_02588|M.leprae_Br4923 SLGAIGVEAFTGFFAALINVRIAAPVITGIVMAATVGAGATAELGAMRIS
*** **:**:***::*::***: **:::** :***.***.**:*****:
Mb3530c|M.bovis_AF2122/97 EEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAARFTTVF
Rv3500c|M.tuberculosis_H37Rv EEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAARFTTVF
MUL_4063|M.ulcerans_Agy99 EEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLAVLAAFFAARFTTVF
MAB_4154c|M.abscessus_ATCC_199 EEIDALETMAVHAISYLVSTRLVAGLIAIIPLYSLSVLAAFFASRATTVM
Mflv_4539|M.gilvum_PYR-GCK EEIDALETMGIRPVEYLVSTRIVAGMIAIAPLYSIAVILSFLASKLTTVV
Mvan_2850|M.vanbaalenii_PYR-1 EEIDALETMGIRPVEYLVSTRIVAGMIAITPLYSIAVMLSFAASKLTTVV
MSMEG_2854|M.smegmatis_MC2_155 EEIDALESMGIRPVEYLVSTRIVAGMVAITPLYAVAVILSFAASNLTTVV
TH_0394|M.thermoresistible__bu EEVDALETMGIRAVEYLVSTRLVAGMLAITPLYAVAVLLSFAASKLTTVV
MMAR_4711|M.marinum_M EEIDALESMAIRPVSYLVSTRIVAGMMAITPLYSIAVILSFLASQFTTVI
MAV_0947|M.avium_104 EEVDALESMAIRPVAYLVSTRILAGMLAITPLYSIAVILSFVASQFTTTF
MLBr_02588|M.leprae_Br4923 EEIDALEVMSIKSISFLVTTRILAGLVVIVPLYAVAMIMAFLSPHIITTV
**:**:* *.::.: :**:**::**::.* ***::::: :* :.. *..
Mb3530c|M.bovis_AF2122/97 VNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGG
Rv3500c|M.tuberculosis_H37Rv VNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNASGG
MUL_4063|M.ulcerans_Agy99 INGQSAGLYDHYFNTFLIPSDLLWSFLQAIVMAIAVMLVHTYYGYNASGG
MAB_4154c|M.abscessus_ATCC_199 INGQSPGVYDHYFNTFLVPTDLLWSFLQAIVMSVVVMLVHTSYGFNASGG
Mflv_4539|M.gilvum_PYR-GCK LFGQSAGLYNHYFTTFLNPRDLLWSFLQAILMAMAVLLVHTYFGYFAGGG
Mvan_2850|M.vanbaalenii_PYR-1 LFGQSAGLYNHYFTTFLNPRDLLWSFLQAILMAMAVLLVHTYFGYFATGG
MSMEG_2854|M.smegmatis_MC2_155 MFGQSAGLYNHYFSTFLNPVDLLWSFLQAILMAIAILLVHTYFGFFAAGG
TH_0394|M.thermoresistible__bu LFGQSAGLYDHYFSTFLNPVDLLWSFLQALLMALAVLLVHTYFGYFASGG
MMAR_4711|M.marinum_M LFGQSGGLYQHYFTTFLNPIDLLWSFLQAVLMAITILLIHTYFGYFASGG
MAV_0947|M.avium_104 LLGQSQGLYQHYFNTFLNPIDLLWSFLQAILMALTILLIHTYYGYFASGG
MLBr_02588|M.leprae_Br4923 LYGQSNGTYEHYFRTFLRPDDVFWSFLEAVIITAVVMITHCYYGYTANGG
: *** * *:*** *** * *::***::*: :: .::: * :*: * **
Mb3530c|M.bovis_AF2122/97 SVGVGVAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG
Rv3500c|M.tuberculosis_H37Rv SVGVGVAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG
MUL_4063|M.ulcerans_Agy99 SVGVGIAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG
MAB_4154c|M.abscessus_ATCC_199 PVGVGVAVGQAVRTSLIVVVLVTLFISLAVYGGSGNFNLSG
Mflv_4539|M.gilvum_PYR-GCK PSGVGVAVGNAVRTSLIVVISVTLLVSLAVYGANGNFNLSG
Mvan_2850|M.vanbaalenii_PYR-1 PSGVGVAVGNAVRTSLIVVISVTLLVSLSVYGANGNFNLSG
MSMEG_2854|M.smegmatis_MC2_155 PSGVGVAVGNAVRTSLIVVIAVTLLVSLAVYGSNGNFNLSG
TH_0394|M.thermoresistible__bu PAGVGVAVGNAVRTSLIVVIAVTLLISLSVYGADGNFNLSG
MMAR_4711|M.marinum_M PAGVGVATGNAVRTSLIVVVSVTLLVSLSVYGSNGNFHLSG
MAV_0947|M.avium_104 PAGVGNATGNAVRTSLIVVVSVTLLVSLSIYGTNGNFNLSG
MLBr_02588|M.leprae_Br4923 PVGVGEAVGRSMRFSLVSVQVVVLSATLALYGVDPNFALTV
. *** *.*.::* **: * :.* :*::** . ** *: