For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
ALRAVYPRMTRQLEKPVGTLSRIGDHTLFYGKAIAGAPFAATHYRREIIRLVAEISMGAGTLAMIGGTLV IVGFLTLAAGGTLAVQGYSSLGNIGIEALTGFLAAFINVRIAAPIVAGIGLAATFGAGVTAQLGAMRINE EIDALESMAIRPVSYLVSTRIVAGMMAITPLYSIAVILSFLASQFTTVILFGQSGGLYQHYFTTFLNPID LLWSFLQAVLMAITILLIHTYFGYFASGGPAGVGVATGNAVRTSLIVVVSVTLLVSLSVYGSNGNFHLSG *
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. marinum M | MMAR_4711 | - | - | 100% (281) | hypothetical protein MMAR_4711 |
| M. marinum M | MMAR_4988 | yrbE4B | e-101 | 64.10% (273) | membrane protein YrbE4B |
| M. marinum M | MMAR_4050 | yrbE3B_1 | 1e-84 | 51.60% (281) | integral membrane protein YrbE3B_1 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3530c | yrbE4B | 1e-99 | 62.91% (275) | integral membrane protein YrbE4b |
| M. gilvum PYR-GCK | Mflv_2507 | - | 1e-134 | 84.95% (279) | hypothetical protein Mflv_2507 |
| M. tuberculosis H37Rv | Rv3500c | yrbE4B | 1e-99 | 62.91% (275) | integral membrane protein YrbE4b |
| M. leprae Br4923 | MLBr_02588 | yrbE1B | 4e-81 | 51.06% (282) | hypothetical protein MLBr_02588 |
| M. abscessus ATCC 19977 | MAB_4154c | - | 1e-97 | 64.89% (262) | hypothetical protein MAB_4154c |
| M. avium 104 | MAV_0947 | - | 1e-138 | 87.54% (281) | TrnB2 protein |
| M. smegmatis MC2 155 | MSMEG_4795 | - | 1e-138 | 87.81% (279) | ABC-transporter integral membrane protein |
| M. thermoresistible (build 8) | TH_0522 | - | 1e-137 | 87.10% (279) | TrnB2 protein |
| M. ulcerans Agy99 | MUL_4063 | yrbE4B | 1e-101 | 64.36% (275) | membrane protein YrbE4B |
| M. vanbaalenii PYR-1 | Mvan_4151 | - | 1e-134 | 85.30% (279) | hypothetical protein Mvan_4151 |
CLUSTAL 2.0.9 multiple sequence alignment
Mb3530c|M.bovis_AF2122/97 MS------YDVTIRFRRFFSRLQRP----VDNFG---EQALFYGETMRYV
Rv3500c|M.tuberculosis_H37Rv MS------YDVTIRFRRFFSRLQRP----VDNFG---EQALFYGETMRYV
MUL_4063|M.ulcerans_Agy99 MS------YDLTVRFHRFMSRLARP----VDNLG---EQALFYGETVRYI
MAB_4154c|M.abscessus_ATCC_199 MSGPYLSTHTVTSYTVRYMRGLGRS----FDKFG---EQALFYAQSLSYI
MMAR_4711|M.marinum_M --------MALRAVYPRMTRQLEKP----VGTLSRIGDHTLFYGKAIAGA
MAV_0947|M.avium_104 --------MALRAAYPRLTRQLERP----VALLAGIGDHALFYGKALAGM
TH_0522|M.thermoresistible__bu MG----TIQTLRATYPRLARQIERP----VSLMGRIGDHTLFYGRALAGA
MSMEG_4795|M.smegmatis_MC2_155 -------MTILRSTYPRLTRQFNKP----VATLSRVGDHTLFYLRAIAGT
Mflv_2507|M.gilvum_PYR-GCK MG----TSTVIRSRSPRLVGNLGRP----VAVLGRLGDHVLFYGRAVAGV
Mvan_4151|M.vanbaalenii_PYR-1 MG----TSTLLRQRFPRLVDHLGRP----VALLSRLGDHVLFYGRAIGGV
MLBr_02588|M.leprae_Br4923 MS----TAAVLRARFPRAAANLNRYGGAAARGIDDIGQMSWFGLIALGNI
: * : : : : * ::
Mb3530c|M.bovis_AF2122/97 PNAITRYRKETVRLVAEMTLGAGALVMIGGTVGVAAFLTLASGGVIAVQG
Rv3500c|M.tuberculosis_H37Rv PNAITRYRKETVRLVAEMTLGAGALVMIGGTVGVAAFLTLASGGVIAVQG
MUL_4063|M.ulcerans_Agy99 PNATTRYRKETIRLVAEMTLGAGALVMIGGTVGVAAFLTLASGGVIAVQG
MAB_4154c|M.abscessus_ATCC_199 PAALTKYRKETIRVLAEITMGTGALVMIGGTVGVAVFLTLASGGVIAVQG
MMAR_4711|M.marinum_M PFAATHYRREIIRLVAEISMGAGTLAMIGGTLVIVGFLTLAAGGTLAVQG
MAV_0947|M.avium_104 PFAATRYTREVVRLVAEISMGAGTLAMIGGTVVIVGFLTLAAGGTLAIQG
TH_0522|M.thermoresistible__bu PYAAMRFRTEIIRLIAEISMGAGTLAMIGGTVVIVGFLTLAAGGTLAVQG
MSMEG_4795|M.smegmatis_MC2_155 PHAALHYRKELVRLIAEISMGAGTLAMIGGTVVIVGFLTLATGGVLAIQG
Mflv_2507|M.gilvum_PYR-GCK PHAAVHFRKEIIRLIAEISMGAGTLAMIGGTVVIVGFLTLAAGGTLAIQG
Mvan_4151|M.vanbaalenii_PYR-1 PHAAVHFRKEIVRLIAEISMGAGTLAMIGGTVVIVGFLTLAAGGTLAIQG
MLBr_02588|M.leprae_Br4923 PNALSRYRKETLRLIAQIGMGTGAMAVVGGTAAIVGFVTLSGSSLVAIQG
* * :: * :*::*:: :*:*::.::*** :. *:**: .. :*:**
Mb3530c|M.bovis_AF2122/97 YSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAGATAQLGAMR
Rv3500c|M.tuberculosis_H37Rv YSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAGATAQLGAMR
MUL_4063|M.ulcerans_Agy99 YSSLGDIGIEALTGFLSAFLNVRVVAPVIAGIALAATIGAGATAQLGAMR
MAB_4154c|M.abscessus_ATCC_199 YSSLGNIGIEALTGFLSAFLNVRIVAPVVAGIAMAATIGAGTTAQLGAMR
MMAR_4711|M.marinum_M YSSLGNIGIEALTGFLAAFINVRIAAPIVAGIGLAATFGAGVTAQLGAMR
MAV_0947|M.avium_104 YTSLGNIGIEALTGFLAAFINVRIAAPVVAGIGLAATFGAGVTAQLGAMR
TH_0522|M.thermoresistible__bu YSSLGDIGIEALTGFLSAFINVRIAAPVVAGIGLAATFGAGVTAQLGAMR
MSMEG_4795|M.smegmatis_MC2_155 YSSLGNIGIEALTGFLSAFINVRIAAPVVAGIGLAATFGAGVTAQLGAMR
Mflv_2507|M.gilvum_PYR-GCK YSSLGDIGIEALTGFLAAFINVRIAAPVVAGIGLAATFGAGVTAQLGAMR
Mvan_4151|M.vanbaalenii_PYR-1 YSSLGNIGIEALTGFLAAFINVRIAAPVVAGIGLAATFGAGVTAQLGAMR
MLBr_02588|M.leprae_Br4923 FASLGAIGVEAFTGFFAALINVRIAAPVITGIVMAATVGAGATAELGAMR
::*** **:**:***::*::***:.**:::** :***.***.**:*****
Mb3530c|M.bovis_AF2122/97 VSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAARFTT
Rv3500c|M.tuberculosis_H37Rv VSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLSVLAAFFAARFTT
MUL_4063|M.ulcerans_Agy99 VSEEIDAVECMAVHSVSYLVSTRLIAGLVAIIPLYSLAVLAAFFAARFTT
MAB_4154c|M.abscessus_ATCC_199 VAEEIDALETMAVHAISYLVSTRLVAGLIAIIPLYSLSVLAAFFASRATT
MMAR_4711|M.marinum_M INEEIDALESMAIRPVSYLVSTRIVAGMMAITPLYSIAVILSFLASQFTT
MAV_0947|M.avium_104 INEEVDALESMAIRPVAYLVSTRILAGMLAITPLYSIAVILSFVASQFTT
TH_0522|M.thermoresistible__bu INEEVDALESMGIPPIPYLVSTRIVAGMLAITPLYSIAVILSFVASQFTT
MSMEG_4795|M.smegmatis_MC2_155 INEEIDALESMAIRPVEYLVSTRIVAGMIAITPLYAIAVILSFLASQFTT
Mflv_2507|M.gilvum_PYR-GCK INEEIDALESMGIRPVEYLVSTRIVAGMVAITPLYSIAVILSFIASQFTT
Mvan_4151|M.vanbaalenii_PYR-1 INEEIDALESMGIRPVEYLVSTRIVAGMVAIAPLYSIAVILSFVASQFTT
MLBr_02588|M.leprae_Br4923 ISEEIDALEVMSIKSISFLVTTRILAGLVVIVPLYAVAMIMAFLSPHIIT
: **:**:* *.: .: :**:**::**::.* ***::::: :*.:.: *
Mb3530c|M.bovis_AF2122/97 VFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNAS
Rv3500c|M.tuberculosis_H37Rv VFVNGQSAGLYDHYFNTFLIPSDLLWSFMQAIAMSIAVMLVHTYYGYNAS
MUL_4063|M.ulcerans_Agy99 VFINGQSAGLYDHYFNTFLIPSDLLWSFLQAIVMAIAVMLVHTYYGYNAS
MAB_4154c|M.abscessus_ATCC_199 VMINGQSPGVYDHYFNTFLVPTDLLWSFLQAIVMSVVVMLVHTSYGFNAS
MMAR_4711|M.marinum_M VILFGQSGGLYQHYFTTFLNPIDLLWSFLQAVLMAITILLIHTYFGYFAS
MAV_0947|M.avium_104 TFLLGQSQGLYQHYFNTFLNPIDLLWSFLQAILMALTILLIHTYYGYFAS
TH_0522|M.thermoresistible__bu VVLFGQSSGLYAHYFDTFLNPIDLLWSFLQAVLMAITILLIHTYFGYFAT
MSMEG_4795|M.smegmatis_MC2_155 VVLLGQSGGLYNHYFDTFLNPIDLLWSFLQAILMAITILLIHTYFGYFAS
Mflv_2507|M.gilvum_PYR-GCK VVLFGQSGGLYDHYFDTFLNPIDLLWSFLQAVLMAIAILLVHTYFGYFAS
Mvan_4151|M.vanbaalenii_PYR-1 VVLFGQSGGLYDHYFDTFLNPIDLLWSFLQAVLMAIAILLVHTYFGYFAS
MLBr_02588|M.leprae_Br4923 TVLYGQSNGTYEHYFRTFLRPDDVFWSFLEAVIITAVVMITHCYYGYTAN
..: *** * * *** *** * *::***::*: :: .::: * :*: *.
Mb3530c|M.bovis_AF2122/97 GGSVGVGVAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG
Rv3500c|M.tuberculosis_H37Rv GGSVGVGVAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG
MUL_4063|M.ulcerans_Agy99 GGSVGVGIAVGQAVRTSLIVVVVITLFISLAVYGASGNFNLSG
MAB_4154c|M.abscessus_ATCC_199 GGPVGVGVAVGQAVRTSLIVVVLVTLFISLAVYGGSGNFNLSG
MMAR_4711|M.marinum_M GGPAGVGVATGNAVRTSLIVVVSVTLLVSLSVYGSNGNFHLSG
MAV_0947|M.avium_104 GGPAGVGNATGNAVRTSLIVVVSVTLLVSLSIYGTNGNFNLSG
TH_0522|M.thermoresistible__bu GGPSGVGVAVGNAVRTSLIVVVSVTLLVSLSVYGSNGNFNLSG
MSMEG_4795|M.smegmatis_MC2_155 GGPSGVGVAVGNAVRTSLIVVVSVTLLVSLAVYGSNGNFNLSG
Mflv_2507|M.gilvum_PYR-GCK GGPSGVGAAVGNAVRTSLVVVVSVTLLVSLSIYGSNGNFNLSG
Mvan_4151|M.vanbaalenii_PYR-1 GGPSGVGAAVGNAVRTSLVVVVSVTLLVSLSIYGSNGNFNLSG
MLBr_02588|M.leprae_Br4923 GGPVGVGEAVGRSMRFSLVSVQVVVLSATLALYGVDPNFALTV
**. *** *.*.::* **: * :.* :*::** . ** *: