For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MADEPVDHARTTRPHAGETMKDARNLPGLAIIGVSLVVFVSSLVAFATDHMSIGGMLVGLAAVGAVVGGA WLATEHYRVRKNEERWYANHPGIMRQHPS
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_1769 | - | - | 100% (99) | UsfY protein |
| M. smegmatis MC2 155 | MSMEG_1791 | - | 1e-33 | 66.67% (96) | UsfY protein |
| M. smegmatis MC2 155 | MSMEG_1777 | - | 2e-24 | 51.55% (97) | UsfY protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3316c | usfY | 2e-19 | 48.39% (93) | hypothetical protein Mb3316c |
| M. gilvum PYR-GCK | Mflv_4793 | - | 4e-32 | 62.50% (96) | putative protein UsfY |
| M. tuberculosis H37Rv | Rv3288c | usfY | 2e-19 | 48.39% (93) | hypothetical protein Rv3288c |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_2519c | - | 1e-13 | 46.07% (89) | hypothetical protein MAB_2519c |
| M. marinum M | MMAR_1245 | usfY | 7e-19 | 47.31% (93) | hypothetical protein MMAR_1245 |
| M. avium 104 | MAV_4260 | - | 4e-20 | 48.45% (97) | UsfY protein |
| M. thermoresistible (build 8) | TH_1001 | - | 2e-23 | 50.54% (93) | UsfY protein |
| M. ulcerans Agy99 | MUL_2642 | usfY | 5e-19 | 47.31% (93) | hypothetical protein MUL_2642 |
| M. vanbaalenii PYR-1 | Mvan_1655 | - | 3e-30 | 58.76% (97) | putative protein UsfY |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_4793|M.gilvum_PYR-GCK -----------------------------------MRGPSDPVDHVRTTR
Mvan_1655|M.vanbaalenii_PYR-1 -----------------------------------MKGPNDPVDHVRTTR
MSMEG_1769|M.smegmatis_MC2_155 -------------------------------------MADEPVDHARTTR
TH_1001|M.thermoresistible__bu ------------------------------------------VDHARTTR
Mb3316c|M.bovis_AF2122/97 MGQIPPQPVRRVLPLMVVPGNGQKWRNRTETEEAMGDTYRDPVDHLRTTR
Rv3288c|M.tuberculosis_H37Rv MGQIPPQPVRRVLPLMVVPGNGQKWRNRTETEEAMGDTYRDPVDHLRTTR
MMAR_1245|M.marinum_M ----------------------------------MGDTYRDPVDHLRTTR
MUL_2642|M.ulcerans_Agy99 ----------------------------------MGDTYRDPVDHLRTTR
MAV_4260|M.avium_104 ----------------------------------MGDTFHDPVDHLRTTR
MAB_2519c|M.abscessus_ATCC_199 ----------------------------------MHDDGIDPVDHARTFR
*** ** *
Mflv_4793|M.gilvum_PYR-GCK PHAGESMKDNKIMPGLVVIGLSLVSFVAMLSAFATSHHDVGVMLGAIAAA
Mvan_1655|M.vanbaalenii_PYR-1 PHAGESMKDNKIMPGLVVIGLALVSFVSALAAFATVNHDVGVMLGALGLA
MSMEG_1769|M.smegmatis_MC2_155 PHAGETMKDARNLPGLAIIGVSLVVFVSSLVAFATDHMSIGGMLVGLAAV
TH_1001|M.thermoresistible__bu PHAGESLKNTASMPALIVLGLGLVAFVSCLATLAAGETMAGVVLACLAVL
Mb3316c|M.bovis_AF2122/97 PLAGESLIDVVHWPGYLLIVAGVVGGVGALAAFGTGHHAEGMTFGVVAIV
Rv3288c|M.tuberculosis_H37Rv PLAGESLIDVVHWPGYLLIVAGVVGGVGALAAFGTGHHAEGMTFGVVAIV
MMAR_1245|M.marinum_M PLAGESLIDVLHWPGYLLVVAGVIGGVGSLAAFGTGHHSEGMASGVVALT
MUL_2642|M.ulcerans_Agy99 PLAGESLIDVLHWPGYLLVVAGVIGGVGSLAAFGTGHHSEGMASGVVALT
MAV_4260|M.avium_104 PLAGESLIDVLHWPGYLLVVAGVVGACGSLAAFATGHHHEGMTAGVTAVI
MAB_2519c|M.abscessus_ATCC_199 PHAGESLKDRVAWPGLAFIALGVLSVVLGLAAAAYMFYGWTLVAGIAALV
* ***:: : *. .: .:: * : . .
Mflv_4793|M.gilvum_PYR-GCK GFVLGGGWLFIEHQRVRRLEERWYAEHPGAWRQRPNS----
Mvan_1655|M.vanbaalenii_PYR-1 GFVVGGGWLMIEHHRVRHLEDVWYAQHPGVPRQRPNS----
MSMEG_1769|M.smegmatis_MC2_155 GAVVGGAWLATEHYRVRKNEERWYANHPGIMRQHPS-----
TH_1001|M.thermoresistible__bu GFAVAGVWLMVEHRRVRRIEERWLDEHPAAARQRPRGDTSS
Mb3316c|M.bovis_AF2122/97 VTVVGLAWLAFEHRRIRKIADRWYTEHPEVRRQRLAG----
Rv3288c|M.tuberculosis_H37Rv VTVVGLAWLAFEHRRIRKIADRWYTEHPEVRRQRLAG----
MMAR_1245|M.marinum_M VAVVGLIWLAFEHRRVRRIADRWYSEHPEVRRQRLAS----
MUL_2642|M.ulcerans_Agy99 VAVVGLIWLAFEHRRVRRIADRWYSGHPEVRRQRLAS----
MAV_4260|M.avium_104 AAVLGLVWLAVEHRRIRRIADRWYAEHPEVHRQWPAS----
MAB_2519c|M.abscessus_ATCC_199 FFFLGWLWMHVERRRVRRMEAEWHQEHSVPHHD--------
:. *: *: *:*: * *. ::