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GQIPPQPVRRVLPLMVVPGNGQKWRNRTETEEAMGDTYRDPVDHLRTTRPLAGESLIDVVHWPGYLLIVA GVVGGVGALAAFGTGHHAEGMTFGVVAIVVTVVGLAWLAFEHRRIRKIADRWYTEHPEVRRQRLAG*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. tuberculosis H37Rv | Rv3288c | usfY | - | 100% (137) | PUTATIVE PROTEIN USFY |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3316c | usfY | 8e-79 | 100.00% (137) | hypothetical protein Mb3316c |
| M. gilvum PYR-GCK | Mflv_4793 | - | 5e-22 | 48.94% (94) | putative protein UsfY |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_2519c | - | 1e-15 | 43.01% (93) | hypothetical protein MAB_2519c |
| M. marinum M | MMAR_1245 | usfY | 3e-51 | 86.27% (102) | hypothetical protein MMAR_1245 |
| M. avium 104 | MAV_4260 | - | 5e-45 | 78.79% (99) | UsfY protein |
| M. smegmatis MC2 155 | MSMEG_1791 | - | 4e-23 | 53.19% (94) | UsfY protein |
| M. thermoresistible (build 8) | TH_1001 | - | 2e-17 | 42.11% (95) | UsfY protein |
| M. ulcerans Agy99 | MUL_2642 | usfY | 2e-50 | 85.29% (102) | hypothetical protein MUL_2642 |
| M. vanbaalenii PYR-1 | Mvan_1655 | - | 4e-21 | 50.00% (94) | putative protein UsfY |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_4793|M.gilvum_PYR-GCK -----------------------------------MRGPSDPVDHVRTTR
Mvan_1655|M.vanbaalenii_PYR-1 -----------------------------------MKGPNDPVDHVRTTR
MSMEG_1791|M.smegmatis_MC2_155 -----------------------------------MKGPKDPVDHARTTR
TH_1001|M.thermoresistible__bu ------------------------------------------VDHARTTR
Rv3288c|M.tuberculosis_H37Rv MGQIPPQPVRRVLPLMVVPGNGQKWRNRTETEEAMGDTYRDPVDHLRTTR
Mb3316c|M.bovis_AF2122/97 MGQIPPQPVRRVLPLMVVPGNGQKWRNRTETEEAMGDTYRDPVDHLRTTR
MMAR_1245|M.marinum_M ----------------------------------MGDTYRDPVDHLRTTR
MUL_2642|M.ulcerans_Agy99 ----------------------------------MGDTYRDPVDHLRTTR
MAV_4260|M.avium_104 ----------------------------------MGDTFHDPVDHLRTTR
MAB_2519c|M.abscessus_ATCC_199 ----------------------------------MHDDGIDPVDHARTFR
*** ** *
Mflv_4793|M.gilvum_PYR-GCK PHAGESMKDNKIMPGLVVIGLSLVSFVAMLSAFATSHHDVGVMLGAIAAA
Mvan_1655|M.vanbaalenii_PYR-1 PHAGESMKDNKIMPGLVVIGLALVSFVSALAAFATVNHDVGVMLGALGLA
MSMEG_1791|M.smegmatis_MC2_155 PHAGESMKDNMIMPALIVIGLALVTFVGSLAAFATKHHDVGLTLVSLAAA
TH_1001|M.thermoresistible__bu PHAGESLKNTASMPALIVLGLGLVAFVSCLATLAAGETMAGVVLACLAVL
Rv3288c|M.tuberculosis_H37Rv PLAGESLIDVVHWPGYLLIVAGVVGGVGALAAFGTGHHAEGMTFGVVAIV
Mb3316c|M.bovis_AF2122/97 PLAGESLIDVVHWPGYLLIVAGVVGGVGALAAFGTGHHAEGMTFGVVAIV
MMAR_1245|M.marinum_M PLAGESLIDVLHWPGYLLVVAGVIGGVGSLAAFGTGHHSEGMASGVVALT
MUL_2642|M.ulcerans_Agy99 PLAGESLIDVLHWPGYLLVVAGVIGGVGSLAAFGTGHHSEGMASGVVALT
MAV_4260|M.avium_104 PLAGESLIDVLHWPGYLLVVAGVVGACGSLAAFATGHHHEGMTAGVTAVI
MAB_2519c|M.abscessus_ATCC_199 PHAGESLKDRVAWPGLAFIALGVLSVVLGLAAAAYMFYGWTLVAGIAALV
* ****: : *. .: .:: *:: . : .
Mflv_4793|M.gilvum_PYR-GCK GFVLGGGWLFIEHQRVRRLEERWYAEHPGAWRQRP----NS
Mvan_1655|M.vanbaalenii_PYR-1 GFVVGGGWLMIEHHRVRHLEDVWYAQHPGVPRQRP----NS
MSMEG_1791|M.smegmatis_MC2_155 GFVVGALWLALEHLRVRRIEERWYAEHPGVMRQGP----SS
TH_1001|M.thermoresistible__bu GFAVAGVWLMVEHRRVRRIEERWLDEHPAAARQRPRGDTSS
Rv3288c|M.tuberculosis_H37Rv VTVVGLAWLAFEHRRIRKIADRWYTEHPEVRRQRL----AG
Mb3316c|M.bovis_AF2122/97 VTVVGLAWLAFEHRRIRKIADRWYTEHPEVRRQRL----AG
MMAR_1245|M.marinum_M VAVVGLIWLAFEHRRVRRIADRWYSEHPEVRRQRL----AS
MUL_2642|M.ulcerans_Agy99 VAVVGLIWLAFEHRRVRRIADRWYSGHPEVRRQRL----AS
MAV_4260|M.avium_104 AAVLGLVWLAVEHRRIRRIADRWYAEHPEVHRQWP----AS
MAB_2519c|M.abscessus_ATCC_199 FFFLGWLWMHVERRRVRRMEAEWHQEHSVPHHD--------
:. *: .*: *:*:: * *. ::