For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
LFGEPSWPDHVSMSSPNRAGLFGGLGMTFVGGSVAVSGALAEAPLHTAQALRYAIACLLLLGWVRLTGHP LRRPRGTEWLWLLGVTVSGLVLFNVALVHGSRHAEPAVLAVAVACVPVALATVGPLLEGHRPHTRILVAA VMVSVGAVVVEGLGRADAMGLAWSAVVFVCEAGFTLLAVPVLASHGPAGVSVHTTWLAAVMFGVLALSTE GWRAATRFDAGAVPAIGYLAVGVTAIAFILWYTCVRGLGTGRAGLLTGVAPVAAAVIGIPLTGAVPGVAV WCGVGLIACGLAVGLGVNAERGLVAHIRAKTRTEVDVRGEYPKSRG*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_1571 | - | - | 100% (327) | integral membrane protein |
M. smegmatis MC2 155 | MSMEG_2188 | - | 6e-08 | 24.14% (261) | integral membrane protein |
M. smegmatis MC2 155 | MSMEG_3276 | - | 3e-07 | 25.17% (294) | integral membrane protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_3133 | - | 6e-06 | 27.70% (148) | hypothetical protein Mflv_3133 |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_3762 | - | 4e-09 | 25.56% (270) | hypothetical protein MAB_3762 |
M. marinum M | MMAR_4903 | - | 3e-06 | 21.26% (301) | hypothetical protein MMAR_4903 |
M. avium 104 | MAV_4124 | - | 1e-05 | 28.47% (137) | dehydrogenase |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_5539 | - | 5e-09 | 26.32% (228) | hypothetical protein Mvan_5539 |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_4903|M.marinum_M -------------------------MPALAMGVTVTLWAFAFVGVR---- Mvan_5539|M.vanbaalenii_PYR-1 ----------------------MSLRGWLLFTAMGVIWGIPYLLIK---- MAB_3762|M.abscessus_ATCC_1997 ----------------------MNDKANFRAGVILALVSAATFGFSGPFA MSMEG_1571|M.smegmatis_MC2_155 -----------------MLFGEPSWPDHVSMSSPNRAGLFGGLGMTFVGG Mflv_3133|M.gilvum_PYR-GCK -----------------------MPTDQARTGALMAVAAMLCVQLG-LAV MAV_4124|M.avium_104 MPDWTAAQLPSFAGRTVIVTGANAGLGEVTARELARVGGHVILAVRNTDK . . MMAR_4903|M.marinum_M --SAGRVFS----------------------------------------- Mvan_5539|M.vanbaalenii_PYR-1 --VAVEGLS----------------------------------------- MAB_3762|M.abscessus_ATCC_1997 KSLMAAGWS----------------------------------------- MSMEG_1571|M.smegmatis_MC2_155 SVAVSGALA----------------------------------------- Mflv_3133|M.gilvum_PYR-GCK AVTLIDDIG----------------------------------------- MAV_4124|M.avium_104 GRAAADRMAGVATGRVEVRELDLQDLASVRRFADGIDTVDVLVNNAGIMA . MMAR_4903|M.marinum_M -------------PGVLALSRLFIAVMVMAVIATIAATYTAYAGRATTRR Mvan_5539|M.vanbaalenii_PYR-1 -------------VPVLVFARTAVGALVLIPLT-------------LRRG MAB_3762|M.abscessus_ATCC_1997 -------------LTAVVTARLATGAAVMVVAAC-----------IAAPG MSMEG_1571|M.smegmatis_MC2_155 -------------EAPLHTAQALRYAIACLLLLG--------WVRLTGHP Mflv_3133|M.gilvum_PYR-GCK -------------VEGVAWLRLAWAGILFLIIVR---------------P MAV_4124|M.avium_104 TKHAVTVDGFEGQIGTNHLGHFALTNLLLPKLTDRVVTVSSLMHHFGYIS : MMAR_4903|M.marinum_M LRPPSAAALTLVIAYGVAWFGAYSIVISWAEQHIDAGTTALLVNLAPILV Mvan_5539|M.vanbaalenii_PYR-1 AWAPVLAHWRPVVAFAFFEIIAAWLLLSDAERHITSSLTGLLIAAAPIVA MAB_3762|M.abscessus_ATCC_1997 WFSEARRHAKVVVLYGIIPVAGAQFCYFGAVRHMSVGVAMLLEFLSPILV MSMEG_1571|M.smegmatis_MC2_155 LRRPRGTEWLWLLGVTVSGLVLFNVALVHGSRHAEPAVLAVAVACVPVAL Mflv_3133|M.gilvum_PYR-GCK RRTAFTRNSFLMCVVLGVVTAAITLLFMAALDRIPLGTASALEFLGPLGV MAV_4124|M.avium_104 LKDLNFRSRPYSAWLAYSQSKLANLLFTSELQRRLDAVPSSLRALAAHPG . : . . MMAR_4903|M.marinum_M AVFAGFFLGEG---------------------------------YSARLL Mvan_5539|M.vanbaalenii_PYR-1 ALLDRLTGGDQP--------------------------------LTVKRL MAB_3762|M.abscessus_ATCC_1997 IAWTWMITRHR---------------------------------PHTRVL MSMEG_1571|M.smegmatis_MC2_155 ATVGPLLEGHR---------------------------------PHTRIL Mflv_3133|M.gilvum_PYR-GCK AVARGRGRGRW--------------------------------------- MAV_4124|M.avium_104 WSHTNLQGNSGRKLGDAAVLAVDRIVSTDADFGARQTLYAVSQDLPGDTF MMAR_4903|M.marinum_M TGIAIAFAG----------------------------------------- Mvan_5539|M.vanbaalenii_PYR-1 AGLGTGLAG----------------------------------------- MAB_3762|M.abscessus_ATCC_1997 AGATLALSG----------------------------------------- MSMEG_1571|M.smegmatis_MC2_155 VAAVMVSVG----------------------------------------- Mflv_3133|M.gilvum_PYR-GCK AWPGLAAAG----------------------------------------- MAV_4124|M.avium_104 VGPRFGLYGRTQPTWRNWPAKRAGTAAALWELSEELTGTSFRSDPDLRRG . * MMAR_4903|M.marinum_M -----------------VVLISAGGGGSQTDWLGVGLGLLAAVLYAAGVL Mvan_5539|M.vanbaalenii_PYR-1 -----------------VAVLAGPELAGGSAWP-VTEVLLVAVCYAIAPL MAB_3762|M.abscessus_ATCC_1997 -----------------MLLVLNIFSGGRVEPVGIAWGLGAAVCAAYYFI MSMEG_1571|M.smegmatis_MC2_155 -----------------AVVVEG---LGRADAMGLAWSAVVFVCEAGFTL Mflv_3133|M.gilvum_PYR-GCK -----------------VLLLTEP-WTGAVDPVGVAFALAAAACWAGYIL MAV_4124|M.avium_104 RAAGPPSPRRPPGAVTKLVLSATPRGVGGYAMSDANLAAVLALCAALASA : . * MMAR_4903|M.marinum_M LQKVA-------LRTVDALSATLWGTLVGFIVTLPFLPAAARELSLASAA Mvan_5539|M.vanbaalenii_PYR-1 IAARY-------LAEVPAMPLTAACLGLAALIYVG-PAAATWPAEIPSMR MAB_3762|M.abscessus_ATCC_1997 SSHRAGGK----AEELQPITLATSGLLVGAVAVGGFGLTGIMPLTFSTQD MSMEG_1571|M.smegmatis_MC2_155 LAVPV-------LASHGPAGVSVHTTWLAAVMFGVLALSTEGWRAATRFD Mflv_3133|M.gilvum_PYR-GCK LTQKVG------DAVAGINGLAVSMPVAGLVATLTVGPTVIERVTPHILL MAV_4124|M.avium_104 VGNVVRQRSAQEVTDKPVGHLALFGMLLRDTRWWLGGLGDIGSYVLLAAA : MMAR_4903|M.marinum_M DLWW---------LVFLGAGPSAIAFTTWAYALARTNAGV-----TAATT Mvan_5539|M.vanbaalenii_PYR-1 VLTA---------VALLAVVCTSLAFILFFALIREVGAPR-----ALVIT MAB_3762|M.abscessus_ATCC_1997 VHVAGWNTPVYVPILVLGVVTTAIAYITGIAAITRLRPSY-----ASLIA MSMEG_1571|M.smegmatis_MC2_155 AGAVP-------AIGYLAVGVTAIAFILWYTCVRGLGTGR-----AGLLT Mflv_3133|M.gilvum_PYR-GCK IGLG------------LAVLLPVVPFALELLALRRLTTAA-----FGTLM MAV_4124|M.avium_104 LDRGS-------VLLVMSLQVTALLFALPIYARMTHHPITGREWAWALLL :. . : : . MMAR_4903|M.marinum_M LMVPALVIALSGLLLAEVPNPLGLAGGGACLIGVALARGLL-RLPARSRR Mvan_5539|M.vanbaalenii_PYR-1 YVNPAVALAAGVIVLNEPLTARHLLGLAMILAGSVLATRRP-VEPMQAAP MAB_3762|M.abscessus_ATCC_1997 LTEVLCAVIAGWVLLGETIAPIQYAGAAVILAGLMLAHRGS-DTPGEPES MSMEG_1571|M.smegmatis_MC2_155 GVAPVAAAVIGIPLTGAVPGVAVWCGVGLIACGLAVGLGVN-AERG---- Mflv_3133|M.gilvum_PYR-GCK ALEPAFAMLLGFVVLDQVPGPFGLVGICLVVAAGVGAARTG-ARAAPVPL MAV_4124|M.avium_104 AVALAVLIAVGDPTGGQQRAPLQTWLVVAAVIGPLLVLGLLGARVWADRP . . MMAR_4903|M.marinum_M RTG------TGDQLQGVESLPVGLSDYAASSTAPSGRQL----------- Mvan_5539|M.vanbaalenii_PYR-1 R------------------------------------------------- MAB_3762|M.abscessus_ATCC_1997 SGAGLTASLPAGLKSHGDDSELSVTSVCDATTESTPSQ------------ MSMEG_1571|M.smegmatis_MC2_155 ------------LVAHIRAKTRTEVDVRGEYPKSRG-------------- Mflv_3133|M.gilvum_PYR-GCK EVG----------------------------------------------- MAV_4124|M.avium_104 VAALLLAAVAGSLLAMFAVLMKGVVDILEHNPGQLWRSFELYALVFCGVA MMAR_4903|M.marinum_M -------------------------------------------------- Mvan_5539|M.vanbaalenii_PYR-1 -------------------------------------------------- MAB_3762|M.abscessus_ATCC_1997 -------------------------------------------------- MSMEG_1571|M.smegmatis_MC2_155 -------------------------------------------------- Mflv_3133|M.gilvum_PYR-GCK -------------------------------------------------- MAV_4124|M.avium_104 GMIYHQSAYRAGALTASLPTIIVAKPVVGGILGIIVLRETLVAGGWEWVV MMAR_4903|M.marinum_M ------------------------------------------- Mvan_5539|M.vanbaalenii_PYR-1 ------------------------------------------- MAB_3762|M.abscessus_ATCC_1997 ------------------------------------------- MSMEG_1571|M.smegmatis_MC2_155 ------------------------------------------- Mflv_3133|M.gilvum_PYR-GCK ------------------------------------------- MAV_4124|M.avium_104 LAVTAVVVIVATVGLARGEAASMSAGAGRDVRPTDRPKAASQA