For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VPSSPDSFDHADHTDPIALARANWEAAGWGDVADGMVAVTSVMRAHQILLARVENALRPYDLSFSRFELL RLLAFSRSGALPITKASDRLQVHVTSVTHAIRRLEAAGLVERVPHPTDGRTTLVRITDLGRSTVEDATVT LNKQVFADVGMSDEESRALAASIETLRRNSGDF
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_1492 | - | - | 100% (173) | transcriptional regulator, MarR family protein |
M. smegmatis MC2 155 | MSMEG_6361 | - | 6e-08 | 37.21% (86) | transcriptional regulator, MarR family protein |
M. smegmatis MC2 155 | MSMEG_0469 | - | 1e-07 | 40.51% (79) | transcriptional regulatory protein PadR- |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0758 | - | 3e-75 | 85.28% (163) | transcriptional regulatory protein |
M. gilvum PYR-GCK | Mflv_5017 | - | 9e-76 | 85.89% (163) | MarR family transcriptional regulator |
M. tuberculosis H37Rv | Rv0737 | - | 4e-75 | 85.28% (163) | transcriptional regulatory protein |
M. leprae Br4923 | MLBr_00550 | - | 7e-07 | 27.55% (98) | putative marR-family transcriptional regulator |
M. abscessus ATCC 19977 | MAB_1184c | - | 3e-50 | 60.38% (159) | MarR family transcriptional regulator |
M. marinum M | MMAR_1075 | - | 2e-74 | 87.42% (159) | transcriptional regulator |
M. avium 104 | MAV_4420 | - | 2e-77 | 89.94% (159) | transcriptional regulator, MarR family protein |
M. thermoresistible (build 8) | TH_0327 | - | 3e-79 | 84.88% (172) | POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN |
M. ulcerans Agy99 | MUL_0833 | - | 1e-74 | 87.42% (159) | transcriptional regulator |
M. vanbaalenii PYR-1 | Mvan_1356 | - | 3e-76 | 85.89% (163) | MarR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_1492|M.smegmatis_MC2_155 -------MPSSPDSFDHAD---HTDPIALARANWEAAGWGDVADGMVAVT TH_0327|M.thermoresistible__bu ------VTPSTPE---------KPDPIAQARANWERAGWGDVADGMVAVT Mflv_5017|M.gilvum_PYR-GCK MVIHTAGAPVRYERCVASD---RPDPIATARDNWERSGWHDVADGMVAVT Mvan_1356|M.vanbaalenii_PYR-1 ---------------MSSE---RRDPIATARANWERSGWGDVADGMVAVT Mb0758|M.bovis_AF2122/97 ---------------MASD---NRDPIAAARANWERSGWGDVSLGMVAVT Rv0737|M.tuberculosis_H37Rv ---------------MASD---NRDPIAAARANWERSGWGDVSLGMVAVT MAV_4420|M.avium_104 ---------------MADSRPHERDPIAAARANWERAGWGDVAPGMVAVT MMAR_1075|M.marinum_M ---------------MAPD--NKRDPIAAARANWEAGGWGDVAQGMVAVT MUL_0833|M.ulcerans_Agy99 ---------------MAPD--NKRDPIAAARANWEAGGWGDVAQGMVAVT MAB_1184c|M.abscessus_ATCC_199 ---------------MTLP----FDPVDDAHRHWVENGWGEVADGMAAVT MLBr_00550|M.leprae_Br4923 --------------------------MVTDDATVADESLDDITD------ : . ::: MSMEG_1492|M.smegmatis_MC2_155 SVMRAHQILLARVENALRPYDLSFSRFELLRLLAFSRSGALPITKASDRL TH_0327|M.thermoresistible__bu SVMRAHQILLARVENALRPYDLSFSRFELLRLLAFTRTGELPITKASDRL Mflv_5017|M.gilvum_PYR-GCK SVMRAHQILLARVETALRPYDLSFSRYELLRLLAFSRTGALPITKASDRL Mvan_1356|M.vanbaalenii_PYR-1 SVMRAHQILLARVETALRPYDLSFSRYELLRLLAFSRSGALPITKASDRL Mb0758|M.bovis_AF2122/97 SVMRAHQILLARVETALRPYDLSFSRFELLRLLAFSRIGALPITKASDRL Rv0737|M.tuberculosis_H37Rv SVMRAHQILLARVETALRPYDLSFSRFELLRLLAFSRIGALPITKASDRL MAV_4420|M.avium_104 SVMRAHQILLARVETALRPYDLSFSRYELLRLLAFSRTGALPITKASDRL MMAR_1075|M.marinum_M SVMRAHQILLARVEAALRPYDLSFSRYELLRLLAFSRTGALPITKASDRL MUL_0833|M.ulcerans_Agy99 SVMRAHQILLARVEAALRPYDLSFSRYELLRLLAFSRTGALPITKASDRL MAB_1184c|M.abscessus_ATCC_199 SVMRAHQIMLARVEDVLRPHGLTFSRYELLMLLSFSRAGSMPMAKASARL MLBr_00550|M.leprae_Br4923 ALLTASRLLVAVSAHSIGQVDETITFPQFRTLVILSNRGPVNLATLAGLL ::: * ::::* : . ::: :: *: ::. * : ::. : * MSMEG_1492|M.smegmatis_MC2_155 QVHVTSVTHAIRRLEAAGLVERVPHPTDGRTTLVRITDLGRSTVEDATVT TH_0327|M.thermoresistible__bu QVHVTSVTHAIRRLEAAGLVERIPHPTDGRTTLVRITELGRSTVEDATVT Mflv_5017|M.gilvum_PYR-GCK QVHVTSVTHAIRRLEADGLVERLPHPTDGRTTLVRITDLGRSTVEDATVT Mvan_1356|M.vanbaalenii_PYR-1 QVHVTSVTHAIRRLEADGLVERIPHPTDGRTTLVRITDLGRSTVEDATVT Mb0758|M.bovis_AF2122/97 QVHVTSVTHAIRRLEADGLVRRVPHPTDGRTTLVQITELGRSTVEDATVT Rv0737|M.tuberculosis_H37Rv QVHVTSVTHAIRRLEADGLVRRVPHPTDGRTTLVQITELGRSTVEDATVT MAV_4420|M.avium_104 QVHVTSVTHAIRRLEADGLVQRVPHPTDGRTTLVQITELGRSTVEDATVT MMAR_1075|M.marinum_M QVHVTSVTHAIRRLEADGLVRRVPHPTDGRTTLVQITDLGRSTVEDATVT MUL_0833|M.ulcerans_Agy99 QVHVTSVTHAIRRLEADGLVRRVPHPTDGRTTLVQITDLGRSTVEDATVT MAB_1184c|M.abscessus_ATCC_199 QVHPTSVTNTVDRLEEAGLVRRVPNPADGRGTLVEITDAGRDLGSVATAD MLBr_00550|M.leprae_Br4923 GVQPSATGRMVDRLVAARLIDRLPHPTSRRELLVALTKRGREVVRRVTAQ *: ::. . : ** *: *:*:*:. * ** :*. **. .*. MSMEG_1492|M.smegmatis_MC2_155 LNKQVFADVG-MSDEESRALAASIETLRRNSGDF--------- TH_0327|M.thermoresistible__bu LNNEVFADIG-MSDAESKALSSAIETLRRNAGDF--------- Mflv_5017|M.gilvum_PYR-GCK LNKDVFGDIG-ISGEQSRALADAIETLRRSAGDF--------- Mvan_1356|M.vanbaalenii_PYR-1 LNNDVFADIG-ISAGQSRALAEAIQTLRRSAGDF--------- Mb0758|M.bovis_AF2122/97 LNEQVFANVG-MGAEESQALVSAVETLRRNAGDF--------- Rv0737|M.tuberculosis_H37Rv LNEQVFANVG-MGAEESQALVSAVETLRRNAGDF--------- MAV_4420|M.avium_104 LNKQVFADIG-MSDTESQQLASSIETLRRNAGDF--------- MMAR_1075|M.marinum_M LNEHVFANIG-MSTGESEALVSSIETLRRSAGDF--------- MUL_0833|M.ulcerans_Agy99 LNEHVFANIG-MSTGESEALVSSIETLRRSAGDF--------- MAB_1184c|M.abscessus_ATCC_199 LNAKVFAQIG-LSPSRTRTLVSVLTHLRRDAGDFS-------- MLBr_00550|M.leprae_Br4923 RRVEIARIVEKMPPSERLGLVRALTAFSTAGGEPDVRLDIISI . .: : : . * : : .*: