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M. smegmatis MC2 155 MSMEG_1398 (rpsL)

annotation: 30S ribosomal protein S12
coordinates: 1498302 - 1498676
length: 124

MPTIQQLVRKGRRDKIAKVKTAALKGSPQRRGVCTRVYTTTPKKPNSALRKVARVKLTSQVEVTAYIPGE
GHNLQEHSMVLVRGGRVKDLPGVRYKIIRGSLDTQGVKNRKQARSRYGAKKEKS
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. smegmatis MC2 155MSMEG_1398rpsL-100% (124)30S ribosomal protein S12

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb0701rpsL4e-6699.19% (123) 30S ribosomal protein S12
M. gilvum PYR-GCKMflv_5078rpsL3e-6597.58% (124) 30S ribosomal protein S12
M. tuberculosis H37RvRv0682rpsL4e-6699.19% (123) 30S ribosomal protein S12
M. leprae Br4923MLBr_01880rpsL5e-6697.58% (124) 30S ribosomal protein S12
M. abscessus ATCC 19977MAB_3851crpsL3e-6597.58% (124) 30S ribosomal protein S12
M. marinum MMMAR_1011rpsL2e-6699.19% (124) 30S ribosomal protein S12, RpsL
M. avium 104MAV_4492rpsL2e-6699.19% (124) 30S ribosomal protein S12
M. thermoresistible (build 8)TH_1892rpsL8e-4597.73% (88) PROBABLE 30S RIBOSOMAL PROTEIN S12 RPSL
M. ulcerans Agy99MUL_0763rpsL1e-6598.39% (124) 30S ribosomal protein S12
M. vanbaalenii PYR-1Mvan_1279rpsL3e-6597.58% (124) 30S ribosomal protein S12

CLUSTAL 2.0.9 multiple sequence alignment


MMAR_1011|M.marinum_M               MPTIQQLVRKGRRDKIGKVKTAALKGSPQRRGVCTRVYTTTPKKPNSALR
MAV_4492|M.avium_104                MPTIQQLVRKGRRDKIGKVKTAALKGSPQRRGVCTRVYTTTPKKPNSALR
MLBr_01880|M.leprae_Br4923          MPTIQQLVRKGRRDKIGKVKTAALKGNPQRRGVCTRVYTSTPKKPNSALR
MUL_0763|M.ulcerans_Agy99           MPTIQQLVRKGRRDKIGKVKTAALKRSPQRRGVCTRVYTTTPKKPNSALR
Mb0701|M.bovis_AF2122/97            MPTIQQLVRKGRRDKISKVKTAALKGSPQRRGVCTRVYTTTPKKPNSALR
Rv0682|M.tuberculosis_H37Rv         MPTIQQLVRKGRRDKISKVKTAALKGSPQRRGVCTRVYTTTPKKPNSALR
MSMEG_1398|M.smegmatis_MC2_155      MPTIQQLVRKGRRDKIAKVKTAALKGSPQRRGVCTRVYTTTPKKPNSALR
TH_1892|M.thermoresistible__bu      ------------------------------------VYTTTPKKPNSALR
Mflv_5078|M.gilvum_PYR-GCK          MPTINQLVRKGRRDKIAKVKTAALKGSPQRRGVCTRVYTTTPKKPNSALR
MAB_3851c|M.abscessus_ATCC_199      MPTINQLVRKGRRDKIAKVKTAALKGSPQRRGVCTRVYTTTPKKPNSALR
Mvan_1279|M.vanbaalenii_PYR-1       MPTINQLVRKGRRDKIAKVKTAALKGSPQRRGVCTRVYTTTPKKPNSALR
                                                                        ***:**********

MMAR_1011|M.marinum_M               KVARVKLTSQVEVTAYIPGEGHNLQEHSMVLVRGGRVKDLPGVRYKIIRG
MAV_4492|M.avium_104                KVARVKLTSQVEVTAYIPGEGHNLQEHSMVLVRGGRVKDLPGVRYKIIRG
MLBr_01880|M.leprae_Br4923          KVARVKLTSQVEVTAYIPGEGHNLQEHSMVLVRGGRVKDLPGVRYKIIRG
MUL_0763|M.ulcerans_Agy99           KVARVKLTSQVEVTAYIPGEGHNLQEHSMVLVRGGRVKDLPGVRYKIIRG
Mb0701|M.bovis_AF2122/97            KVARVKLTSQVEVTAYIPGEGHNLQEHSMVLVRGGRVKDLPGVRYKIIRG
Rv0682|M.tuberculosis_H37Rv         KVARVKLTSQVEVTAYIPGEGHNLQEHSMVLVRGGRVKDLPGVRYKIIRG
MSMEG_1398|M.smegmatis_MC2_155      KVARVKLTSQVEVTAYIPGEGHNLQEHSMVLVRGGRVKDLPGVRYKIIRG
TH_1892|M.thermoresistible__bu      KVARVKLTTGVEVTAYIPGEGHNLQEHSMVLVRGGRVKDLPGVRYKIIRG
Mflv_5078|M.gilvum_PYR-GCK          KVARVRLTSAVEVTAYIPGEGHNLQEHSMVLVRGGRVKDLPGVRYKIIRG
MAB_3851c|M.abscessus_ATCC_199      KVARVRLTSAVEVTAYIPGEGHNLQEHSMVLVRGGRVKDLPGVRYKIIRG
Mvan_1279|M.vanbaalenii_PYR-1       KVARVRLTSAVEVTAYIPGEGHNLQEHSMVLVRGGRVKDLPGVRYKIIRG
                                    *****:**: ****************************************

MMAR_1011|M.marinum_M               SLDTQGVKNRKQARSRYGAKKEKS
MAV_4492|M.avium_104                SLDTQGVKNRKQARSRYGAKKEKS
MLBr_01880|M.leprae_Br4923          SLDTQGVKNRKQARSRYGAKKEKS
MUL_0763|M.ulcerans_Agy99           SLDTQGVKNRKQARSRYGAKKEKS
Mb0701|M.bovis_AF2122/97            SLDTQGVKNRKQARSRYGAKKEKG
Rv0682|M.tuberculosis_H37Rv         SLDTQGVKNRKQARSRYGAKKEKG
MSMEG_1398|M.smegmatis_MC2_155      SLDTQGVKNRKQARSRYGAKKEKS
TH_1892|M.thermoresistible__bu      SLDTQGVKNRKQARSRYGAKKEKS
Mflv_5078|M.gilvum_PYR-GCK          SLDTQGVKNRKQARSRYGAKKEKS
MAB_3851c|M.abscessus_ATCC_199      SLDTQGVKNRKQARSRYGAKKEKS
Mvan_1279|M.vanbaalenii_PYR-1       SLDTQGVKNRKQARSRYGAKKEKS
                                    ***********************.