For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MPTIQQLVRKGRRDKIGKVKTAALKGSPQRRGVCTRVYTTTPKKPNSALRKVARVKLTSQVEVTAYIPGE GHNLQEHSMVLVRGGRVKDLPGVRYKIIRGSLDTQGVKNRKQARSRYGAKKEKS
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_1011 | rpsL | - | 100% (124) | 30S ribosomal protein S12, RpsL |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0701 | rpsL | 5e-66 | 99.19% (123) | 30S ribosomal protein S12 |
M. gilvum PYR-GCK | Mflv_5078 | rpsL | 8e-65 | 96.77% (124) | 30S ribosomal protein S12 |
M. tuberculosis H37Rv | Rv0682 | rpsL | 5e-66 | 99.19% (123) | 30S ribosomal protein S12 |
M. leprae Br4923 | MLBr_01880 | rpsL | 1e-66 | 98.39% (124) | 30S ribosomal protein S12 |
M. abscessus ATCC 19977 | MAB_3851c | rpsL | 8e-65 | 96.77% (124) | 30S ribosomal protein S12 |
M. avium 104 | MAV_4492 | rpsL | 4e-67 | 100.00% (124) | 30S ribosomal protein S12 |
M. smegmatis MC2 155 | MSMEG_1398 | rpsL | 2e-66 | 99.19% (124) | 30S ribosomal protein S12 |
M. thermoresistible (build 8) | TH_1892 | rpsL | 8e-45 | 97.73% (88) | PROBABLE 30S RIBOSOMAL PROTEIN S12 RPSL |
M. ulcerans Agy99 | MUL_0763 | rpsL | 3e-66 | 99.19% (124) | 30S ribosomal protein S12 |
M. vanbaalenii PYR-1 | Mvan_1279 | rpsL | 9e-65 | 96.77% (124) | 30S ribosomal protein S12 |
CLUSTAL 2.0.9 multiple sequence alignment Mb0701|M.bovis_AF2122/97 MPTIQQLVRKGRRDKISKVKTAALKGSPQRRGVCTRVYTTTPKKPNSALR Rv0682|M.tuberculosis_H37Rv MPTIQQLVRKGRRDKISKVKTAALKGSPQRRGVCTRVYTTTPKKPNSALR MMAR_1011|M.marinum_M MPTIQQLVRKGRRDKIGKVKTAALKGSPQRRGVCTRVYTTTPKKPNSALR MAV_4492|M.avium_104 MPTIQQLVRKGRRDKIGKVKTAALKGSPQRRGVCTRVYTTTPKKPNSALR MLBr_01880|M.leprae_Br4923 MPTIQQLVRKGRRDKIGKVKTAALKGNPQRRGVCTRVYTSTPKKPNSALR MUL_0763|M.ulcerans_Agy99 MPTIQQLVRKGRRDKIGKVKTAALKRSPQRRGVCTRVYTTTPKKPNSALR MSMEG_1398|M.smegmatis_MC2_155 MPTIQQLVRKGRRDKIAKVKTAALKGSPQRRGVCTRVYTTTPKKPNSALR TH_1892|M.thermoresistible__bu ------------------------------------VYTTTPKKPNSALR Mflv_5078|M.gilvum_PYR-GCK MPTINQLVRKGRRDKIAKVKTAALKGSPQRRGVCTRVYTTTPKKPNSALR MAB_3851c|M.abscessus_ATCC_199 MPTINQLVRKGRRDKIAKVKTAALKGSPQRRGVCTRVYTTTPKKPNSALR Mvan_1279|M.vanbaalenii_PYR-1 MPTINQLVRKGRRDKIAKVKTAALKGSPQRRGVCTRVYTTTPKKPNSALR ***:********** Mb0701|M.bovis_AF2122/97 KVARVKLTSQVEVTAYIPGEGHNLQEHSMVLVRGGRVKDLPGVRYKIIRG Rv0682|M.tuberculosis_H37Rv KVARVKLTSQVEVTAYIPGEGHNLQEHSMVLVRGGRVKDLPGVRYKIIRG MMAR_1011|M.marinum_M KVARVKLTSQVEVTAYIPGEGHNLQEHSMVLVRGGRVKDLPGVRYKIIRG MAV_4492|M.avium_104 KVARVKLTSQVEVTAYIPGEGHNLQEHSMVLVRGGRVKDLPGVRYKIIRG MLBr_01880|M.leprae_Br4923 KVARVKLTSQVEVTAYIPGEGHNLQEHSMVLVRGGRVKDLPGVRYKIIRG MUL_0763|M.ulcerans_Agy99 KVARVKLTSQVEVTAYIPGEGHNLQEHSMVLVRGGRVKDLPGVRYKIIRG MSMEG_1398|M.smegmatis_MC2_155 KVARVKLTSQVEVTAYIPGEGHNLQEHSMVLVRGGRVKDLPGVRYKIIRG TH_1892|M.thermoresistible__bu KVARVKLTTGVEVTAYIPGEGHNLQEHSMVLVRGGRVKDLPGVRYKIIRG Mflv_5078|M.gilvum_PYR-GCK KVARVRLTSAVEVTAYIPGEGHNLQEHSMVLVRGGRVKDLPGVRYKIIRG MAB_3851c|M.abscessus_ATCC_199 KVARVRLTSAVEVTAYIPGEGHNLQEHSMVLVRGGRVKDLPGVRYKIIRG Mvan_1279|M.vanbaalenii_PYR-1 KVARVRLTSAVEVTAYIPGEGHNLQEHSMVLVRGGRVKDLPGVRYKIIRG *****:**: **************************************** Mb0701|M.bovis_AF2122/97 SLDTQGVKNRKQARSRYGAKKEKG Rv0682|M.tuberculosis_H37Rv SLDTQGVKNRKQARSRYGAKKEKG MMAR_1011|M.marinum_M SLDTQGVKNRKQARSRYGAKKEKS MAV_4492|M.avium_104 SLDTQGVKNRKQARSRYGAKKEKS MLBr_01880|M.leprae_Br4923 SLDTQGVKNRKQARSRYGAKKEKS MUL_0763|M.ulcerans_Agy99 SLDTQGVKNRKQARSRYGAKKEKS MSMEG_1398|M.smegmatis_MC2_155 SLDTQGVKNRKQARSRYGAKKEKS TH_1892|M.thermoresistible__bu SLDTQGVKNRKQARSRYGAKKEKS Mflv_5078|M.gilvum_PYR-GCK SLDTQGVKNRKQARSRYGAKKEKS MAB_3851c|M.abscessus_ATCC_199 SLDTQGVKNRKQARSRYGAKKEKS Mvan_1279|M.vanbaalenii_PYR-1 SLDTQGVKNRKQARSRYGAKKEKS ***********************.