For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TRRALAEDRGLQAERTALAWTRTALAIAASGVLVLLRDSHIQDDPGRLVVVAAVAVVALGVFALGAHRRR RLLAHPRGNAGRRYIRAAGVTILAEGLLVMIYLMLA*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_1230 | - | - | 100% (107) | hypothetical protein MSMEG_1230 |
| M. smegmatis MC2 155 | MSMEG_0173 | - | 8e-05 | 43.75% (64) | hypothetical protein MSMEG_0173 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2296 | - | 3e-12 | 39.58% (96) | transmembrane protein |
| M. gilvum PYR-GCK | Mflv_0979 | - | 2e-08 | 33.98% (103) | hypothetical protein Mflv_0979 |
| M. tuberculosis H37Rv | Rv2273 | - | 3e-12 | 39.58% (96) | transmembrane protein |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_0671 | - | 2e-06 | 39.39% (99) | hypothetical protein MAB_0671 |
| M. marinum M | MMAR_3369 | - | 1e-10 | 38.04% (92) | transmembrane protein |
| M. avium 104 | - | - | - | - | - |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | MUL_1270 | - | 7e-11 | 38.04% (92) | transmembrane protein |
| M. vanbaalenii PYR-1 | Mvan_5845 | - | 6e-07 | 39.08% (87) | hypothetical protein Mvan_5845 |
CLUSTAL 2.0.9 multiple sequence alignment
Mb2296|M.bovis_AF2122/97 -MNRHS--TAASDRG-LQAERTTLAWTRTAFALLVNGVLLTLKDTQGADG
Rv2273|M.tuberculosis_H37Rv -MNRHS--TAASDRG-LQAERTTLAWTRTAFALLVNGVLLTLKDTQGADG
MMAR_3369|M.marinum_M -MSQSSETAQAADRG-LQAERTTLAWTRTSFALLVNGVLLTTKDVQAHAG
MUL_1270|M.ulcerans_Agy99 -MSQSSETAQAADRG-LQAERTTLAWTRTSFALLVNGVLLTTKDVQAHAG
Mflv_0979|M.gilvum_PYR-GCK -MPRPL----PDKPG-LPAERTLLSWERSSFGFLVGGALVLLR-QHGPLG
Mvan_5845|M.vanbaalenii_PYR-1 -MPRRE----PTKPG-LPAERTLLSWERSSFGFLVGGALVLLR-QHGPLG
MSMEG_1230|M.smegmatis_MC2_155 -MTRRA---LAEDRG-LQAERTALAWTRTALAIAASGVLVLLRDSHIQDD
MAB_0671|M.abscessus_ATCC_1997 MITDEIAGTEPDYRFTLANERTYLAWVRTSLALIASGVALMQFVPEFGIP
: . * *** *:* *:::.: ..*. : .
Mb2296|M.bovis_AF2122/97 PAGLIPAGLAGAAASCCYVIALQRQRALSHRPLPA----RITPRGQVHIL
Rv2273|M.tuberculosis_H37Rv PAGLIPAGLAGAAASCCYVIALQRQRALSHRPLPA----RITPRGQVHIL
MMAR_3369|M.marinum_M LAGLVPAGLAALAASCGYIIAYQRQRTLRRRPRPQ----RITARRQVYIV
MUL_1270|M.ulcerans_Agy99 LAGLVPAGLAALAASCGYTIAYQRQRTLRRRPRPQ----RITARRQVYIV
Mflv_0979|M.gilvum_PYR-GCK PGRILLAVTATLLALLVLALGYRRSHAIRDSPAVT-----AEPRTEVLLM
Mvan_5845|M.vanbaalenii_PYR-1 QWRAVLAITAALLALLVLALGYRRSRQITDSPVIAGRIITSAPHTEVLVI
MSMEG_1230|M.smegmatis_MC2_155 PGRLVVVAAVAVVALGVFALGAHRRRRLLAHPRGN------AGRRYIRAA
MAB_0671|M.abscessus_ATCC_1997 GARHVVSIVLVTTGGLLAMAAARRRRCVQEAMRRD----MALPPSHMPTF
: . . :* : : :
Mb2296|M.bovis_AF2122/97 ATAVLVLMVVTAFAQLL---------------------------------
Rv2273|M.tuberculosis_H37Rv ATAVLVLMVVTAFAQLL---------------------------------
MMAR_3369|M.marinum_M GLAVLVLMVVTAFAQLL---------------------------------
MUL_1270|M.ulcerans_Agy99 GLAVLVLMVVTAFAQLLSAAPGHRRPQLTRSECCSRKSAASRRTSVRSPS
Mflv_0979|M.gilvum_PYR-GCK GGATVVFAVTVVGVLLFAVS------------------------------
Mvan_5845|M.vanbaalenii_PYR-1 GAATLGFATVVVAALLFAL-------------------------------
MSMEG_1230|M.smegmatis_MC2_155 GVTILAEGLLVMIYLMLA--------------------------------
MAB_0671|M.abscessus_ATCC_1997 LSVLLLAMVVLLVALLCTG-------------------------------
. : :
Mb2296|M.bovis_AF2122/97 --------------------------------------------------
Rv2273|M.tuberculosis_H37Rv --------------------------------------------------
MMAR_3369|M.marinum_M --------------------------------------------------
MUL_1270|M.ulcerans_Agy99 ICATVAARFAESVSATRCTIHDASEAVTTPIRLMPPIISNTAITRPVTVI
Mflv_0979|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_5845|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_1230|M.smegmatis_MC2_155 --------------------------------------------------
MAB_0671|M.abscessus_ATCC_1997 --------------------------------------------------
Mb2296|M.bovis_AF2122/97 -----
Rv2273|M.tuberculosis_H37Rv -----
MMAR_3369|M.marinum_M -----
MUL_1270|M.ulcerans_Agy99 GYKSP
Mflv_0979|M.gilvum_PYR-GCK -----
Mvan_5845|M.vanbaalenii_PYR-1 -----
MSMEG_1230|M.smegmatis_MC2_155 -----
MAB_0671|M.abscessus_ATCC_1997 -----