For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. smegmatis MC2 155 MSMEG_0173 (-)

annotation: hypothetical protein MSMEG_0173
coordinates: 198371 - 198691
length: 106

TPMRDSGLQVERTRLAWRRSLLALVAVLALVGRPVVLGQNAVATIAFGSAAVVALGLVVAYRRRSRAVES
AMRDGRPLPGAGVPAAFVVTCVWCAIVAVVALLTM*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. smegmatis MC2 155MSMEG_0173--100% (106)hypothetical protein MSMEG_0173
M. smegmatis MC2 155MSMEG_0174-2e-0534.38% (96) putative inner membrane protein
M. smegmatis MC2 155MSMEG_1230-8e-0546.48% (71) hypothetical protein MSMEG_1230

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97-----
M. gilvum PYR-GCK-----
M. tuberculosis H37Rv-----
M. leprae Br4923-----
M. abscessus ATCC 19977MAB_0671-3e-0535.05% (97) hypothetical protein MAB_0671
M. marinum MMMAR_3368-1e-0637.11% (97) transmembrane protein
M. avium 104-----
M. thermoresistible (build 8)-----
M. ulcerans Agy99MUL_1271-1e-0637.11% (97) transmembrane protein
M. vanbaalenii PYR-1-----

CLUSTAL 2.0.9 multiple sequence alignment


MMAR_3368|M.marinum_M               MAETTTPDSEECAETEPDYRFTLANERTFLAWQRTALGLLAAAVALVQLV
MUL_1271|M.ulcerans_Agy99           MAETTTPDSEECAETEPDYRFTLANERTFLAWQRTALGLLAAAVALVQLV
MAB_0671|M.abscessus_ATCC_1997      MIT------DEIAGTEPDYRFTLANERTYLAWVRTSLALIASGVALMQFV
MSMEG_0173|M.smegmatis_MC2_155      --------------MTPMRDSGLQVERTRLAWRRSLLALVAV-LALVGRP
                                                    *     *  *** *** *: *.*:*  :**:   

MMAR_3368|M.marinum_M               PELAVHGARHVLGVVLATLAILTSGMGLLRWQQADRAMRRGEPLPHHPTP
MUL_1271|M.ulcerans_Agy99           PELAVHGARHVLDVVLATLAILTRGMGLLRWQQADRAMRRGGPLPHHPTP
MAB_0671|M.abscessus_ATCC_1997      PEFGIPGARHVVSIVLVTTGGLLAMAAARRRRCVQEAMRRDMALPPSHMP
MSMEG_0173|M.smegmatis_MC2_155      VVLGQNAVATIAFGSAAVVALGLVVAYRRRSRAVESAMRDGRPLPGAGVP
                                      :.  ..  :     .. .         * : .: *** . .**    *

MMAR_3368|M.marinum_M               AYLAVGLAIVGVVALILVVAKVVTG
MUL_1271|M.ulcerans_Agy99           AYLAVGLAIVGVVALILVVAKVVTG
MAB_0671|M.abscessus_ATCC_1997      TFLSVLLLAM----VVLLVALLCTG
MSMEG_0173|M.smegmatis_MC2_155      AAFVVTCVWCAIVAVVALLTM----
                                    : : *         :: :::