For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MGYHGRAAAIRKKSTTTTLRAGAVLGVIMLGLTGCGGQRGESNDAASAEPTGCEITSDARLSIATGNTTG VYYTLGGALAEAISQQTDGKLKATAAETSASLQNIQQLVAGTHQVAFSLADTAADAVNGTASFSEKQPIA ALARLYPNYTQVIARTDAGINSVADMRGKRVSTGAPNSGTEVIANRMLEAAGLGPGDVQTQRTELGKTVE GMKDGSIDALFWSGGLPTSGITDLIVSRRDQVKFIDVTDTLDKLKEINPIYEAGVIPASTYQTPADVSTV VVPNVLLVKDDMDGNTACVLTKTLFERKDDLVKANKAAEDIELQDARETSPVPLHPGAAKALDELGAAN
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_0982 | - | - | 100% (349) | immunogenic protein |
M. smegmatis MC2 155 | MSMEG_2634 | - | 7e-05 | 24.38% (201) | hypothetical protein MSMEG_2634 |
M. smegmatis MC2 155 | MSMEG_0114 | - | 9e-05 | 24.05% (316) | extracellular solute-binding protein, family protein 3 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_4419 | - | 1e-113 | 63.25% (332) | TRAP transporter solute receptor TAXI family protein |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | - | - | - | - | - |
M. avium 104 | - | - | - | - | - |
M. thermoresistible (build 8) | TH_2996 | - | 8e-05 | 25.13% (195) | PUTATIVE putative aliphatic sulfonates family ABC transporter, |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_1935 | - | 1e-118 | 64.22% (341) | TRAP transporter solute receptor TAXI family protein |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_4419|M.gilvum_PYR-GCK ------------------MTAFATLMLAATAATACGG--RQDAPAADSGG Mvan_1935|M.vanbaalenii_PYR-1 -----------MKRATQAWAGLAALVLVGAAATGCGG--RQDAPTADSGG MSMEG_0982|M.smegmatis_MC2_155 MGYHGRAAAIRKKSTTTTLRAGAVLGVIMLGLTGCGGQ-RGESNDAASAE TH_2996|M.thermoresistible__bu -----------MHTAIEMLRLTLATLISAAALTACGATQSPDSPGLPADA . : . *.**. :: : Mflv_4419|M.gilvum_PYR-GCK EITCEVGTETRVSIATGNSTGVYFSLGNAFAEQVSAATDGTVKATAAETG Mvan_1935|M.vanbaalenii_PYR-1 EITCEVGSDTRVSIATGNSTGVYFSLGNAYAEQISAATDGRVKATAAETG MSMEG_0982|M.smegmatis_MC2_155 PTGCEITSDARLSIATGNTTGVYYTLGGALAEAISQQTDGKLKATAAETS TH_2996|M.thermoresistible__bu ALPTEVPPDTTLVVADDANR------LRTLLTLSGEQDRLTGEVSYANFS *: .:: : :* . . : . :.: *: . Mflv_4419|M.gilvum_PYR-GCK ASVQNIQQLVAGSYQVAFSLADTASDAIEGTGSFDGKEQPIQALSRIYPN Mvan_1935|M.vanbaalenii_PYR-1 ASVQNIQQLVGGSYQVAFSLADTAADAVEGKGSFDGEKQPIQAISRIYPN MSMEG_0982|M.smegmatis_MC2_155 ASLQNIQQLVAGTHQVAFSLADTAADAVNGTASFS-EKQPIAALARLYPN TH_2996|M.thermoresistible__bu SGPLRLEAIRTGNAHLGY-----VGDVPPILAHYSDADVPIVGAVRRDGT :. .:: : *. ::.: ..*. . :. . ** . * . Mflv_4419|M.gilvum_PYR-GCK YTQVIARTDSGITSIADMRGKRVSTGSPGSGTEVIANRLLESAGLNPQTD Mvan_1935|M.vanbaalenii_PYR-1 YTQVIARTDSGITSIADMRGKRVSTGSPGSGTEVIANRLLQSAGLNPESD MSMEG_0982|M.smegmatis_MC2_155 YTQVIARTDAGINSVADMRGKRVSTGAPNSGTEVIANRMLEAAGLGP-GD TH_2996|M.thermoresistible__bu GALIATSPDSGITSLSDLAGKRIGVN-EGTSQQATLLRNLQSVGLGI-GD : : : .*:**.*::*: ***:... .:. :. * *::.**. * Mflv_4419|M.gilvum_PYR-GCK VAAQRLDLTKTVDGMKDGSIDAMFWSG--------GLPTPGITDLFTSAR Mvan_1935|M.vanbaalenii_PYR-1 VAAQRLDLAKTVDGVKDGSIDALFWSG--------GLPTPGITDLLTTSR MSMEG_0982|M.smegmatis_MC2_155 VQTQRTELGKTVEGMKDGSIDALFWSG--------GLPTSGITDLIVSRR TH_2996|M.thermoresistible__bu VEPVYLGLAEFADGLRAEQIQAAVLKQPDRARYLESTAAEGAIEIPNAPG * . * : .:*:: .*:* . . . .: * :: : Mflv_4419|M.gilvum_PYR-GCK EDVTFIDVTPQLGRMAEISPAYEEGLIPATTYQLP---SDVATIVVPNML Mvan_1935|M.vanbaalenii_PYR-1 DDVVFIDITPQLPKMSEISPAYEEGVIPAATYQLP---ADVKTIVVPNML MSMEG_0982|M.smegmatis_MC2_155 DQVKFIDVTDTLDKLKEINPIYEAGVIPASTYQTP---ADVSTVVVPNVL TH_2996|M.thermoresistible__bu ANTGLNYLYAGRDALIDPARAAAVREFVIAWYRAELWRNGHQDTWISEYL :. : : : : : : *: . :.: * Mflv_4419|M.gilvum_PYR-GCK LVRDDLDANLACVLTRT---------------LFEKQPEMAQVVGAAKGI Mvan_1935|M.vanbaalenii_PYR-1 LVREDLDANLACVLTKT---------------LFEKKPELEQVVGAAKGI MSMEG_0982|M.smegmatis_MC2_155 LVKDDMDGNTACVLTKT---------------LFERKDDLVKANKAAEDI TH_2996|M.thermoresistible__bu VKDQHVDVDDARKIVESDGVASIPGFTDEVVATQQETIDLLQQAGAFAGR : :.:* : * :..: :. :: : * . Mflv_4419|M.gilvum_PYR-GCK ALDNARDTDPVPLNRGAEYALDELNAPR Mvan_1935|M.vanbaalenii_PYR-1 NLDNARDTDPVPLNRGAQHALDQLGAAG MSMEG_0982|M.smegmatis_MC2_155 ELQDARETSPVPLHPGAAKALDELGAAN TH_2996|M.thermoresistible__bu ELRARDEFDFRFADLTADSPTENRGGQP * : . . * . :: ..