For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
QQSRLRQTGTGRRQRPGGASRTARGATDGGGEGGRGDDCGGHAIGPHWLSAGGFEATPGDSAGREKASGR SQARQCAQQQHAHCAKQRWDFRVT*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_0931 | - | - | 100% (95) | hypothetical protein MSMEG_0931 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_4039 | infB | 5e-05 | 42.86% (63) | translation initiation factor IF-2 |
| M. tuberculosis H37Rv | Rv3345c | PE_PGRS50 | 7e-05 | 33.33% (87) | PE-PGRS family protein |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | MMAR_4995 | - | 0.0001 | 40.98% (61) | PE-PGRS family protein |
| M. avium 104 | - | - | - | - | - |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment
Rv3345c|M.tuberculosis_H37Rv MVMSLMVAPELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSA
MMAR_4995|M.marinum_M -MSYLIVAPEAMTAAAGDLAGIGSSVAAANAAAAGPTTAMLTAAADEVST
MSMEG_0931|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_4039|M.gilvum_PYR-GCK --------------------------------------------------
Rv3345c|M.tuberculosis_H37Rv AIAALFGTHAQEYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQ
MMAR_4995|M.marinum_M AIAAFFSAHAADYQRLAGQAAALHTQLERVLSAGAVAYAAAETTGTSPLQ
MSMEG_0931|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_4039|M.gilvum_PYR-GCK --------------------------------------------------
Rv3345c|M.tuberculosis_H37Rv ALEQQVLGAINAPTQLWLGRPLIGDGVHGAPGTGQPGGAGGLLWGNGGNG
MMAR_4995|M.marinum_M ----LAINAVSAPAQSLLARPIIGNGAN-ATTPGGNGGDGGWLFGSGGNG
MSMEG_0931|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_4039|M.gilvum_PYR-GCK --------------------------------------------------
Rv3345c|M.tuberculosis_H37Rv GSGAAGQVGGPGGAAGLFGNGGSGGSGGAG-AAGGVGGSGGWLNGNGGAG
MMAR_4995|M.marinum_M AAGAAGQAGGSGGSAGLLGNGGAGGAGGTGGARGGNGGSGGLLFGGGGIG
MSMEG_0931|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_4039|M.gilvum_PYR-GCK --------------------------------------------------
Rv3345c|M.tuberculosis_H37Rv GAGGTGAN----GGAGGN----AWLFGAGGSGGAGTNGGVGGSGGFVYGN
MMAR_4995|M.marinum_M GTGGTGAAGAGMGGMGGNGGSGSWLIGGGGAGGAGGIGGTGGGTGGVGGT
MSMEG_0931|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_4039|M.gilvum_PYR-GCK --------------------------------------------------
Rv3345c|M.tuberculosis_H37Rv GG-AGGIGGIGGIGGNGGDAGLFGNGGAGGAGAAGLPGAAGLNGGDGSDG
MMAR_4995|M.marinum_M GGDAGWLVGAGGSGGSGG-IGATGTGSGGAAGNGGNGGAGGLFMN-GGDG
MSMEG_0931|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_4039|M.gilvum_PYR-GCK ---------------------MAGKARVHELAKELGVTSKEVLARLGEQG
Rv3345c|M.tuberculosis_H37Rv GNGGTGGNGGRGGLLVGNGGAGGAGGVGGDGGKGGAGD--PSFAVNNGAG
MMAR_4995|M.marinum_M GAGGQGGDGAAGAAAAAAGGTGGDGGLGGNGGAGGAGGGGPVLFGHGGAG
MSMEG_0931|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_4039|M.gilvum_PYR-GCK EFVKSASSTVEAPVARRLRESFGGNKPDAVKPAAGASNGAPAKPSAPGAR
Rv3345c|M.tuberculosis_H37Rv GNGGHGGNPGVGGAGGAGGLLAGAHGAAGATPTSGGNGGDGGIGATANSP
MMAR_4995|M.marinum_M GLGGQGGTGGIGGTGGAG-----TTSIAAGTGGNGGAGGAAGGGGTAG--
MSMEG_0931|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_4039|M.gilvum_PYR-GCK PGPRPGPPAPAQPKEPPAPAAPAAAAPAPAAPAPPAAPPAPAASAAPPSA
Rv3345c|M.tuberculosis_H37Rv LQAGGAGGNGGHGGLVGNGGTGGAGGAGHAGSTGATGTALQPTGGNGTNG
MMAR_4995|M.marinum_M --AAGPLTNAGLAGGFGTGGTGGTGGTGGAGAPGIDGAALGEGGTNGYIG
MSMEG_0931|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_4039|M.gilvum_PYR-GCK PEAPSARPTPGPRPGPGGPKPGAPKPAPRTPRVGNNPFSSQQPVERPAPR
Rv3345c|M.tuberculosis_H37Rv GAGGHGGNGGN--GGAQHGDGGVGGKGGAGGSGGAGGNGFDAATLGSPGA
MMAR_4995|M.marinum_M GNGGNGGAGGAALGGGAAGDGGQGGHGGAGGMGGAGANGITGGGVTGAGG
MSMEG_0931|M.smegmatis_MC2_155 ---------------------------------------MQQSRLRQTG-
Mflv_4039|M.gilvum_PYR-GCK PQGPAGP------GGPRPGPGAGGPRPGGGPRPGATPGNMPPRPVGGPR-
: : .
Rv3345c|M.tuberculosis_H37Rv DGGMGGNGGKGGDGGKAGDGGAGAAGDVTLAVNQGAGGDGGNGGEVGVGG
MMAR_4995|M.marinum_M NGGDGGQGGEPGTGGAAGSGGGGQTGSLGIGGTGGHGGAGGDGTPGGNGA
MSMEG_0931|M.smegmatis_MC2_155 ------TGRRQRPGGASRTARGATDG----------GGEGGRGDDCGGHA
Mflv_4039|M.gilvum_PYR-GCK ------PGGGPRPGGGPRPGAGPRPTP---------GGAGRPGGGGGGNY
* ** . . . ** * * *
Rv3345c|M.tuberculosis_H37Rv KGGAGGVSANPALNGSAGANGTAPTSGGNGGNGGAGATPTVAGENGGAGG
MMAR_4995|M.marinum_M AGPTAGTGD-PGVDGGAGGNGGAGGQGGSNGTGGDGGTG-GSGATGGDGG
MSMEG_0931|M.smegmatis_MC2_155 IG--------PHWLSAGGFEATPGDSAGREKASGRSQARQCAQQQHAHCA
Mflv_4039|M.gilvum_PYR-GCK RGGGAGGGGGAGGAAAGGFRGRPGGGGGR--PGQRGGAAGAFGRPGGAPK
* . ...* .. . .* . . : .
Rv3345c|M.tuberculosis_H37Rv NGGHGGSVGNGGAGGAGGNGVAGTGLALNGGNGGNGGIGGNGGSAAGTGG
MMAR_4995|M.marinum_M TGGAGTATDAGGTGGQGGVGGAG-GAPGAAGLAGTGGQAGN----EGVGG
MSMEG_0931|M.smegmatis_MC2_155 KQRWDFRVT-----------------------------------------
Mflv_4039|M.gilvum_PYR-GCK RGRKSKRAKRAEYENMQAPVVGGVRLPHG---------------------
. .
Rv3345c|M.tuberculosis_H37Rv DGGKGGNGGAGANGQDFSASANGANGGQGGNGGNGGIGGKGGDAFATFAK
MMAR_4995|M.marinum_M NGGQGGHGGAGGNGVDG-ADANVFTGDNGGDGTAGGKGGDGGAGGAAGAN
MSMEG_0931|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_4039|M.gilvum_PYR-GCK ----NGETIRLARGASLSDFADKINANPASLVQALFNLGEMVTATQSVND
Rv3345c|M.tuberculosis_H37Rv AGNGGAGGNGGNVGVAGQGGAGGKGAIPAMKGATGADGTAPTSGGDGGNG
MMAR_4995|M.marinum_M GGTGGGGGIGGGGGVGGDGGNGGSGNTGTSSAPAGGTGGIGGTGADGGAG
MSMEG_0931|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_4039|M.gilvum_PYR-GCK ETLELLGGEMNYVVQVVSPEDEDRELLQSFDLSYGED-------------
Rv3345c|M.tuberculosis_H37Rv GNGASPTVAGGNGGDGGKGGSGGNVGNGGNGGAGGNGAAGQAGTPGPTSG
MMAR_4995|M.marinum_M GNGG---AAGGAGGTGGQGGTGGGAGKGGTGGAGGAAVTPGLGIGDEPAG
MSMEG_0931|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_4039|M.gilvum_PYR-GCK -----------------EGGEDDLEFRPPVVTVMGHVDHGKTRLLDTIRD
Rv3345c|M.tuberculosis_H37Rv DSGTSGTDGGAGGNGGAGGAGGTLAGHGGNGGKGGNGGQGGIGGAGERGA
MMAR_4995|M.marinum_M GTGGTGGHGGTGGHGGTGGAAGN-GGAGGAGGQAGDGGSGGEGGDGGTGA
MSMEG_0931|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_4039|M.gilvum_PYR-GCK ATVREGEAGGITQHIGAYQVTVDLDGNERPITFIDTPGHEAFTAMRARGA
Rv3345c|M.tuberculosis_H37Rv DGAGPNANGANGENGGSGGNGGDGGAGGNGGAGGKAQAAGYTDGATGTGG
MMAR_4995|M.marinum_M QGTTVSLPGSGG-NAGNGGNAGGGGVGGTGGAG----ATGAPAGRGGTGG
MSMEG_0931|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_4039|M.gilvum_PYR-GCK KATDIAILVVAADDGVMPQTVEAVNHAQAADVPIVVAVNKIDKEGADPAK
Rv3345c|M.tuberculosis_H37Rv DGGNGGDGGKAGDGGAGENGLNSGAMLPGG--GTVGNPGTGGNGGNGGNA
MMAR_4995|M.marinum_M NGGNAGAGGKGGAGAFGGAGSSPGFLSPAGNGGAGGDAGTAAAGGDGGAG
MSMEG_0931|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_4039|M.gilvum_PYR-GCK IRGQLTEYGLVPEEYGGDTMFVD---------------------------
Rv3345c|M.tuberculosis_H37Rv GVGGTGGKAGTGSLTGLDGTDGITPNGGNGGNGGNGGKGGTAGNGSGAAG
MMAR_4995|M.marinum_M GAGPSGGNGGTG------GNGGHGGNGGNGAEGAIGAQFVPASSLPTPSG
MSMEG_0931|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_4039|M.gilvum_PYR-GCK ----------------------ISAKAGTNIEALLEAVVLTADASLDLRA
Rv3345c|M.tuberculosis_H37Rv GNGGNGGSGLNGGDAGNGGNGGGALN-QAGFFGTGGKGGNGGNGGAGMIN
MMAR_4995|M.marinum_M GAGGDGGNGSNGGAPGAGGSAGAGTGGSTGGQGTGGDGGNGGNGGN----
MSMEG_0931|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_4039|M.gilvum_PYR-GCK NPDMEAQGVAIEAHLDRGRGPVATVLIQRGTLRVGDSVVAG---------
Rv3345c|M.tuberculosis_H37Rv GGLGGFGGAGGGGAVDVAATTGGAGGNGGAGGFASTGLGGPGGAGGPGGA
MMAR_4995|M.marinum_M -------GADGANAVNIAFTPNEPQATAGN----PGGSGITGEIGGSGTN
MSMEG_0931|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_4039|M.gilvum_PYR-GCK ------------DAYGRVRRMVDEHGEDVEEALPSRPVQVIGFTSVPGAG
Rv3345c|M.tuberculosis_H37Rv GDFASGVGGVGGAGGDGGAGGVGGFGGQGGIGGEGRTGGNGGSGGDGGGG
MMAR_4995|M.marinum_M GSPATLPTTQVQQGGDGGAGGTG----TNAANNEVATGGEGGTGGTGSAG
MSMEG_0931|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_4039|M.gilvum_PYR-GCK DNFLVVDEDRIARQIADRR---------SARKRNALAARTRKRISLEDLD
Rv3345c|M.tuberculosis_H37Rv ISLGGNGGLGGNGGVSETGFGGAGGNGGYGGPGGPEGNGGLGGNGGAGGN
MMAR_4995|M.marinum_M G-PGGDGGVGG--DASETGTDGVA----VGGQGGQGGAGGQFGGGGNGGD
MSMEG_0931|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_4039|M.gilvum_PYR-GCK SALKETSQLNLILKGDNSGTVEALEEALLGIQVDDEVQLRVIDRGVGGVT
Rv3345c|M.tuberculosis_H37Rv GGVSTTGGDGGAGGKGGNGGDGGNVGLGGDAGSGGAGGNGGIGTDAGGAG
MMAR_4995|M.marinum_M GGNVTAGSAGSTAGNGGNGGNANNGTIE--------------GSPAGGNG
MSMEG_0931|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_4039|M.gilvum_PYR-GCK ETNVNLASASDAIIIGFN-------------------------VRAEGKA
Rv3345c|M.tuberculosis_H37Rv GAGGAGGNGGSSKSTTTGNAGSGGAG--GNGGTGLNGAGGAGGAGGNAGV
MMAR_4995|M.marinum_M SAGGDGGDGGDVASGATGTAGTGGTGGAGNDGTINAGTGGNGGAGGRAGS
MSMEG_0931|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_4039|M.gilvum_PYR-GCK TELANREGVEIRYYSIIYQAIDEIESALKGMLKPIYEEKELGRAEIRAIF
Rv3345c|M.tuberculosis_H37Rv AGVSFGNAVGGDGGNGGNGGHGGDGTTGGAGGKGGNGSSGAASGSGVVNV
MMAR_4995|M.marinum_M GGANGGN--GGTGGTGGDGGKGGGGAVGGSGGDGGDGG---------INN
MSMEG_0931|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_4039|M.gilvum_PYR-GCK RSSKVGNIAGCLVQSGIMRRNAKARLLRDN------------------VV
Rv3345c|M.tuberculosis_H37Rv TAGHGGNGGNGGNGGNGSAG-AGGQGGAGGSAGNGGHGGGATGGDGGNGG
MMAR_4995|M.marinum_M GAGANGNGGGGGTGGTGSIGAAGGNGGQGGSGGAAGSGGGTAG-NGGAGG
MSMEG_0931|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_4039|M.gilvum_PYR-GCK VAQNLTVSSLKREKDDATEVREGYECGLTLTYNDIKEGDVIETYELVEKA
Rv3345c|M.tuberculosis_H37Rv NGGNSGNSTGVAGLAGGAAGAGGNGGGTSSAAGHGGSGGSGGSGTTGGAG
MMAR_4995|M.marinum_M VGG--------AGGTGGVGGGGGDGG-AGALAGTGGTGGSGGTGGASGAG
MSMEG_0931|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_4039|M.gilvum_PYR-GCK RT------------------------------------------------
Rv3345c|M.tuberculosis_H37Rv AAGGNGGAGAGGGSLSTGQSGGPRRQRWCRWQRRRWLGRQRRRRWCRWQR
MMAR_4995|M.marinum_M GSGGGGGLSGSGQSGANGGTGGASQE-----------GQDG---------
MSMEG_0931|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_4039|M.gilvum_PYR-GCK --------------------------------------------------
Rv3345c|M.tuberculosis_H37Rv RCRRQRWRWRCRQRRLRRQWRQGRRRCRPWLHRRRGRQGRRWRQRRFQQR
MMAR_4995|M.marinum_M ------------QASTDSDGGAGGAGGTGGSGGAAGAGGQA---------
MSMEG_0931|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_4039|M.gilvum_PYR-GCK --------------------------------------------------
Rv3345c|M.tuberculosis_H37Rv QRSRWQRR
MMAR_4995|M.marinum_M --------
MSMEG_0931|M.smegmatis_MC2_155 --------
Mflv_4039|M.gilvum_PYR-GCK --------