For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTDHTRAQVAALVDHTLLKPEATPSDVTALVDEAADLGVFAVCVSPPLVSVAAGVAPSGLAIAAVAGFPS GKHVPGIKATEAELAVAAGATEIDMVIDVGAALAGDLDAVSADITAVRKAVRAATLKVIVESAALLEFSG EPLLADVCRVARDAGADFVKTSTGFHPSGGASVQAVEIMARTVGERLGVKASGGIRTAEQAAAMLDAGAT RLGLSGSRAVLDGFGSA
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_0922 | deoC | - | 100% (227) | deoxyribose-phosphate aldolase |
M. smegmatis MC2 155 | MSMEG_3089 | deoC | 7e-63 | 61.61% (224) | deoxyribose-phosphate aldolase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0488 | deoC | 7e-80 | 71.23% (219) | deoxyribose-phosphate aldolase |
M. gilvum PYR-GCK | Mflv_0097 | - | 3e-82 | 71.30% (223) | deoxyribose-phosphate aldolase |
M. tuberculosis H37Rv | Rv0478 | deoC | 7e-80 | 71.23% (219) | deoxyribose-phosphate aldolase |
M. leprae Br4923 | MLBr_02451 | deoC | 5e-76 | 68.49% (219) | deoxyribose-phosphate aldolase |
M. abscessus ATCC 19977 | MAB_4078c | - | 7e-79 | 71.30% (216) | deoxyribose-phosphate aldolase (DeoC) |
M. marinum M | MMAR_0803 | deoC | 2e-81 | 73.30% (221) | deoxyribose-phosphate aldolase DeoC |
M. avium 104 | MAV_4672 | deoC | 3e-84 | 75.11% (221) | deoxyribose-phosphate aldolase |
M. thermoresistible (build 8) | TH_0872 | deoC | 1e-46 | 75.97% (129) | PROBABLE DEOXYRIBOSE-PHOSPHATE ALDOLASE DEOC |
M. ulcerans Agy99 | MUL_4546 | deoC | 1e-81 | 73.30% (221) | deoxyribose-phosphate aldolase |
M. vanbaalenii PYR-1 | Mvan_0811 | - | 1e-84 | 72.32% (224) | deoxyribose-phosphate aldolase |
CLUSTAL 2.0.9 multiple sequence alignment Mb0488|M.bovis_AF2122/97 MLGQPTRAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMV Rv0478|M.tuberculosis_H37Rv MLGQPTRAQLAALVDHTLLKPETTRADVAALVAEAAELGVYAVCVSPSMV MLBr_02451|M.leprae_Br4923 MQGQPTRKQLAALVDHTLLKSEATHADVAALVAEAVELGVYAVCVSPSMV MAV_4672|M.avium_104 MT--PTRAQLAAFVDHTLLKPEATAADVAALVTEAAELGVYAVCVSPPMV MMAR_0803|M.marinum_M MPGQPTRDQVAALVDHTLLKPEATAADVVALVAEAADLGVYAVCVSPSMV MUL_4546|M.ulcerans_Agy99 MPGQPTRDQVAALVDHTLLKPEATAADVVALVAEAADLGVYAVCVSPSMV Mflv_0097|M.gilvum_PYR-GCK -MGSYTRAQVAALVDHTLLKPEATEADIEAVVAEALALEVKAICVSPTFV Mvan_0811|M.vanbaalenii_PYR-1 -MGSYSRARVAALVDHTLLKPEATEADIEALVTEAAELGVYAICVSPTFV TH_0872|M.thermoresistible__bu -------------------------------------------------- MSMEG_0922|M.smegmatis_MC2_155 -MTDHTRAQVAALVDHTLLKPEATPSDVTALVDEAADLGVFAVCVSPPLV MAB_4078c|M.abscessus_ATCC_199 ---------MAALIDHTLLKPEATPEDVRALVAEAVDLGVLAVCVSPSML Mb0488|M.bovis_AF2122/97 PVAVQAG--GVRVAAVTGFPSGKHVSSVKAHEAAAALASGASEIDMVIDI Rv0478|M.tuberculosis_H37Rv PVAVQAG--GVRVAAVTGFPSGKHVSSVKAHEAAAALASGASEIDMVIDI MLBr_02451|M.leprae_Br4923 PAAVEAGAGGLRVATVVGFPSGEHVSIVKAQEAVQAVASGATEIDMVIAV MAV_4672|M.avium_104 PAAVQAG-AGVRVASVAGFPSGKHVSAVKAHEAALAVASGAAEIDMVIDV MMAR_0803|M.marinum_M PAAVSAG--GVRVATVAGFPSGKHASAIKAHEAALAVACGAVEVDMVIDV MUL_4546|M.ulcerans_Agy99 PAAVSAG--GVRVATVAGFPSGKHASAIKAHEAALAVACGAVEVDMVIDV Mflv_0097|M.gilvum_PYR-GCK AAVASLAP-AATVASVVGFPSGKHLSSVKAAEAHAAAAAGAAEIDMVIDV Mvan_0811|M.vanbaalenii_PYR-1 AAVSLLAP-DATVASVVGFPSGKHVSAIKAEEARLAVEAGAREVDMVIDV TH_0872|M.thermoresistible__bu ---------------------------------------------MVIDV MSMEG_0922|M.smegmatis_MC2_155 SVAAGVAPSGLAIAAVAGFPSGKHVPGIKATEAELAVAAGATEIDMVIDV MAB_4078c|M.abscessus_ATCC_199 PVLLPEGVERLLVAGVVGFPSGKHLSSVKAHEAALAVAAGAHEIDMVIDV *** : Mb0488|M.bovis_AF2122/97 GAALCGDIDAVRSDIEAVRAAAAGAVLKVIVESAVLLGQSNAHTLVDACR Rv0478|M.tuberculosis_H37Rv GAALCGDIDAVRSDIEAVRAAAAGAVLKVIVESAVLLGQSNAHTLVDACR MLBr_02451|M.leprae_Br4923 GAALAGDLDAVRSDIEMVRSAIAGVVLKVIVESAVLLGQANERTLAEVCH MAV_4672|M.avium_104 GAALAGDLDGVRADIAAVRGAVGGAVLKVIVESSALLALADEHTLVRVCR MMAR_0803|M.marinum_M GAALAGHLDAVRSDIEAVRCATSGAVLKVIVESAALLGLADESTLIGVCR MUL_4546|M.ulcerans_Agy99 GAALAGHLDAVRSDIEAVRCATSGAVLKVIVESAALLGLADESTLIGVCR Mflv_0097|M.gilvum_PYR-GCK GAALAGQLDAVRADIAAVRAAAPETVLKVIVESAALLEFGGQPILLDVCR Mvan_0811|M.vanbaalenii_PYR-1 GCALAGELGAVRSDIAAVRAAAPEAVLKVIVESAAILQISGEPLLVDICR TH_0872|M.thermoresistible__bu GAAVAGELGAVYDDIAEVRRAVSGITLKVIVESAVLLEHTDPERLTAVCR MSMEG_0922|M.smegmatis_MC2_155 GAALAGDLDAVSADITAVRKAVRAATLKVIVESAALLEFSGEPLLADVCR MAB_4078c|M.abscessus_ATCC_199 GAAVGGDFGAVQGDIEAVRRAVPAATLKVIIESAALLERSGPEAVRAACR *.*: *.:..* ** ** * .****:**:.:* . : *: Mb0488|M.bovis_AF2122/97 AAEDAGADFVKTSTGCHPAGGATVRAVELMAETVGPRLGVKASGGIRTAA Rv0478|M.tuberculosis_H37Rv AAEDAGADFVKTSTGCHPAGGATVRAVELMAETVGPRLGVKASGGIRTAA MLBr_02451|M.leprae_Br4923 VAEAAGADFVKTSTGFHPAGGASVRAVTLMTEAVGGRLGVKASGGIRTAV MAV_4672|M.avium_104 AAEDAGADFVKTSTGFHPSGGASVRAVALMAEAVGGRLGVKASGGIRTAA MMAR_0803|M.marinum_M VAEDAGADFVKTSTGFHPAGGASTRAVEVMASAVGGRLGVKASGGIRTAT MUL_4546|M.ulcerans_Agy99 VAEDAGADFVKTSTGFHPAGGASTRAVEVMASAVGGRLGVKASGGIRTAT Mflv_0097|M.gilvum_PYR-GCK IAEDAGAEFVKTSTGFHPSGGASPRAVELMAGAVGGRLGVKASGGIRTAA Mvan_0811|M.vanbaalenii_PYR-1 VAEDAGADFVKTSTGFHPSGGASVRAVELMAGAVGGRLGVKASGGIRSAA TH_0872|M.thermoresistible__bu AAEDAGADFVKTSTGFHPSGGASVQAVSVMAAAVGGRLGVKASGGIRTAA MSMEG_0922|M.smegmatis_MC2_155 VARDAGADFVKTSTGFHPSGGASVQAVEIMARTVGERLGVKASGGIRTAE MAB_4078c|M.abscessus_ATCC_199 ASEAAGADFVKTSTGFHPAGGATVEAVRIMAETVGDRLQVKASGGIRTAR :. ***:******* **:***: .** :*: :** ** ********:* Mb0488|M.bovis_AF2122/97 DAVAMLNAGATRLGLSGTRAVLDGLS-- Rv0478|M.tuberculosis_H37Rv DAVAMLNAGATRLGLSGTRAVLDGLS-- MLBr_02451|M.leprae_Br4923 DAIALLDAGATRLGLSSTREVLDGLS-- MAV_4672|M.avium_104 DALAMLDAGATRLGLSGTRAVLDGLG-- MMAR_0803|M.marinum_M DAVAMLSAGATRLGLSGTRAVLEGLGQN MUL_4546|M.ulcerans_Agy99 DAVAMLSAGATRLGLSGTRAVLEGLGQN Mflv_0097|M.gilvum_PYR-GCK AATEMLDAGATRLGLSGTRAVLDGLRA- Mvan_0811|M.vanbaalenii_PYR-1 DAAAMLDAGATRLGLSGTRAVLAGFPD- TH_0872|M.thermoresistible__bu DAVAMLDAGATRLGLSASRAVLDGLT-- MSMEG_0922|M.smegmatis_MC2_155 QAAAMLDAGATRLGLSGSRAVLDGFGSA MAB_4078c|M.abscessus_ATCC_199 DAAAMLEAGATRLGLSGSRIVLDGFAD- * :*.*********.:* ** *: