For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
ARDARQTLEGLEAIAGVAHEPEADPRGVVVLTHGAGGNRDGALLTRICDEWAARGWLAIRYNLPYRRRRP KGPPSGSAQADQEGVAEAIAFARGLTDGPVLAGGHSYGGRMTSMVAAEHGGMDVLTLFSYPVHPPGKPER ARTEHLPNITGPTVFTHGSSDPFGTIGEVTAAAALINGPTEVVAIDGARHDLASKTHNVPALAVDAALRM LDIV*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_0824 | - | - | 100% (215) | hypothetical protein MSMEG_0824 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0429c | - | 2e-80 | 68.66% (201) | hypothetical protein Mb0429c |
M. gilvum PYR-GCK | Mflv_0182 | - | 2e-82 | 69.65% (201) | hypothetical protein Mflv_0182 |
M. tuberculosis H37Rv | Rv0421c | - | 2e-80 | 68.66% (201) | hypothetical protein Rv0421c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_4198 | - | 1e-70 | 62.93% (205) | hypothetical protein MAB_4198 |
M. marinum M | MMAR_0733 | - | 2e-82 | 71.84% (206) | hypothetical protein MMAR_0733 |
M. avium 104 | MAV_4733 | - | 3e-83 | 72.77% (202) | hypothetical protein MAV_4733 |
M. thermoresistible (build 8) | TH_1511 | - | 4e-80 | 70.39% (206) | CONSERVED HYPOTHETICAL PROTEIN |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_0723 | - | 1e-83 | 70.15% (201) | hypothetical protein Mvan_0723 |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_0824|M.smegmatis_MC2_155 MARDARQTLEGLEAIAGVAHEPEA----DPRGVVVLTHGAGGNRDGALLT TH_1511|M.thermoresistible__bu MS---------LEEIAGVAHHPTG----APAGAVVLTHGAGGDRDSALLQ Mb0429c|M.bovis_AF2122/97 MN---------LDQIAGVAHQPAG----PPHGVVVLTHGAGGSRESTLLQ Rv0421c|M.tuberculosis_H37Rv MN---------LDQIAGVAHQPAG----PPHGVVVLTHGAGGSRESTLLQ MMAR_0733|M.marinum_M MN---------LDQIAGIAHEPVTGPGQPPNGIVILTHGAGGNRDSLLLQ MAV_4733|M.avium_104 MN---------LDRIAGIAHRPDG----TPEGVVVLTHGAGGNRDSPLLQ Mflv_0182|M.gilvum_PYR-GCK MTSTSPTE---IDAIAGVSHHPDG----TPRGGVALTHGAGGSRESPMLV Mvan_0723|M.vanbaalenii_PYR-1 MT---------LEDITGIAHRPDG----IPAGVVALTHGAGGNRESPMLQ MAB_4198|M.abscessus_ATCC_1997 MS------TEELPDIAGIAHHPDG----HPRGAVVLTHGAGGSCHSPMLR * : *:*::*.* * * * *******. .. :* MSMEG_0824|M.smegmatis_MC2_155 RICDEWAARGWLAIRYNLPYRRRRPKGPPSGSAQA-DQEGVAEAIAFARG TH_1511|M.thermoresistible__bu RVCDEWASRGWLAVRYNLPYRRRRPKGPPSNSAAT-DQQGVAEAIRWAHS Mb0429c|M.bovis_AF2122/97 QVCAEWTRRGWLAVRYNLPYRRRRPTGPPSGSGSG-DRAGIVEAIQLCRG Rv0421c|M.tuberculosis_H37Rv QVCAEWTRRGWLAVRYNLPYRRRRPTGPPSGSGSG-DRAGIVEAIQLCRG MMAR_0733|M.marinum_M QVCDAWAQRGWLAVRYNLPYRRRRPKGPPSGSAAT-DRAGIVEAIELCRG MAV_4733|M.avium_104 QVCDEWAQRGWLAVRYNLPFRRRRPTGPPSGSGAA-DRAGIVEAITLCRG Mflv_0182|M.gilvum_PYR-GCK ALCDEWARRGFLAVRYNLPYRRRRPKGPPSGSSAA-DIAGIVEAVATVRA Mvan_0723|M.vanbaalenii_PYR-1 ALCEEWARRGWLAVRYNLPYRRRRPKGPPSGSATA-DMAGIVEAVSAVRA MAB_4198|M.abscessus_ATCC_1997 LLCTAWAERGWLAIRFDMPFRRNRPSGPPSASSADKDRAGIAEVINKARA :* *: **:**:*:::*:**.**.**** *. * *:.*.: :. MSMEG_0824|M.smegmatis_MC2_155 LTDGPVLAGGHSYGGRMTSMVAAEHG-----GMDVLTLFSYPVHPPGKPE TH_1511|M.thermoresistible__bu VTDGPVIAGGHSYGGRMTSMVVAGRNPEAMPRLAALTLFSYPVHPPGKPE Mb0429c|M.bovis_AF2122/97 LAEGPLIAGGHSYGGRQTSMVVAAGQAP----VDVLTLFSYPVHPPGKPE Rv0421c|M.tuberculosis_H37Rv LAEGPLIAGGHSYGGRQTSMVVAAGQAP----VDVLTLFSYPVHPPGKPE MMAR_0733|M.marinum_M LAEGPLIAGGHSYGGRQTSMVVAAAQAP----VDVLTLFSYPVHPPGKPE MAV_4733|M.avium_104 LADGPLIAGGHSYGGRQTSMVVAAGDAA----VDVLTLFSYPVHPPGKPE Mflv_0182|M.gilvum_PYR-GCK LVDGPVLAGGHSYGGRMTSMAVADGLA-----LDVLTLFSYPLHPPGKPE Mvan_0723|M.vanbaalenii_PYR-1 LADGPVIAGGHSYGGRLTSMAVADGLR-----VDVLTLFSYPLHPPGKPE MAB_4198|M.abscessus_ATCC_1997 MVDGPLLAGGHSYGGRQTSMLVAEKGP----IVDVLTLFSYPLHPPGKPD :.:**::********* *** .* : .*******:******: MSMEG_0824|M.smegmatis_MC2_155 RARTEHLPNITGPTVFTHGSSDPFGTIGEVTAAAALINGPTEVVAIDGAR TH_1511|M.thermoresistible__bu RTRTDHLRAITVPTVFTHGSSDPFGSLDEVRAAAALIPARTEVVAVAGAR Mb0429c|M.bovis_AF2122/97 RVRTEHLPGIAVPTVFTHGTADPFGTLAQVRSAAAMVSAPTEVVEITGAR Rv0421c|M.tuberculosis_H37Rv RVRTEHLPGIAVPTVFTHGTADPFGTLAQVRSAAAMVSAPTEVVEITGAR MMAR_0733|M.marinum_M RARTEHLPDITVPTVFTHGTSDPFGTPAEVRAAAALIAAPTEVVEITGAR MAV_4733|M.avium_104 RARTEHLPAITVPTVFTHGTSDPFGTPEELNAAAALVGGRTAVVEIASAR Mflv_0182|M.gilvum_PYR-GCK RARTEHLPRITVPTVFTHGTADPFGTLDELRPAAALIGAPVEIVEVTGAR Mvan_0723|M.vanbaalenii_PYR-1 RARTEHLPRITVPTVFTHGTADPFGTLDELRSAADLVAGPTEIVEVTGAR MAB_4198|M.abscessus_ATCC_1997 RLRIEHLPDIQVPTVFTHGTSDAFGTIAELKEASVLIPGGAAIVEIAGAR * * :** * *******::*.**: :: *: :: . . :* : .** MSMEG_0824|M.smegmatis_MC2_155 HDLASKTHNVPALAVDAALRMLDIV-- TH_1511|M.thermoresistible__bu HDLGSRDIDVAAAAVTAALQLVA---- Mb0429c|M.bovis_AF2122/97 HDLGSKTLDVARLAVDAALRLSAGQIA Rv0421c|M.tuberculosis_H37Rv HDLGSKTLDVARLAVDAALRLSAGQIA MMAR_0733|M.marinum_M HDLGSKTLDVAGLAVAAALRLLGPA-- MAV_4733|M.avium_104 HDLRSKTLNVAALAVDAALQLLGRN-- Mflv_0182|M.gilvum_PYR-GCK HDLGSKKLDVPALAVDGALRLLG---- Mvan_0723|M.vanbaalenii_PYR-1 HDLNSKKFDVPALAVDAALRMLG---- MAB_4198|M.abscessus_ATCC_1997 HDLGSKTIDVPALAIDAALTALKS--- *** *: :*. *: .**