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SALLQVNDLRVSFTTDGGVVRAVDGVSFDLKRGEILAVVGESGSGKSVTAQTLIGLTRASNSAITGAIDF DGRDINSLDDGALREIRGEHIAMVFQDPMTSLNPVYRVGDQIIEMIRAHRDVSKAEARDKAVELLRAVGI PHPEQRVSDYPHEFSGGMRQRVMIAMALALEPEVLIADEPTTALDVTVQAQILRLVDRLNQERELAVVLI THDLGVVAEVADRVVVMYAGQIVEDGTLDEIFYDPQHPYTWGLLGSLPRVEDTNQERLQQIPGQPPSLLN PPTGCRFAARCAHAFSKCTQPPPLEDRKGDGHLDRCWLTPEEKRTLR*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_0640 | - | - | 100% (328) | oligopeptide transport ATP-binding protein OppD |
| M. smegmatis MC2 155 | MSMEG_6121 | - | 3e-82 | 54.15% (301) | dipeptide transport ATP-binding protein DppD |
| M. smegmatis MC2 155 | MSMEG_4997 | oppD | 8e-80 | 51.48% (305) | ABC transporter, ATP-binding protein OppD |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1312c | oppD | 9e-80 | 50.81% (309) | oligopeptide-transport ATP-binding protein ABC transporter |
| M. gilvum PYR-GCK | Mflv_2259 | - | 4e-79 | 50.65% (306) | oligopeptide/dipeptide ABC transporter, ATPase subunit |
| M. tuberculosis H37Rv | Rv1281c | oppD | 9e-80 | 50.81% (309) | oligopeptide-transport ATP-binding protein ABC transporter |
| M. leprae Br4923 | MLBr_01122 | - | 1e-76 | 47.06% (323) | putative ABC transport protein, ATP-binding component |
| M. abscessus ATCC 19977 | MAB_0722 | - | 3e-72 | 51.13% (266) | putative oligopeptide ABC transporter, ATP-binding protein |
| M. marinum M | MMAR_4138 | oppD | 1e-80 | 48.61% (323) | oligopeptide-transport ATP-binding protein ABC transporter |
| M. avium 104 | MAV_1431 | oppD | 4e-80 | 48.61% (323) | ABC transporter, ATP-binding protein OppD |
| M. thermoresistible (build 8) | TH_3537 | - | 4e-80 | 50.00% (316) | PUTATIVE oligopeptide/dipeptide ABC transporter, ATPase subunit |
| M. ulcerans Agy99 | MUL_4001 | oppD | 5e-80 | 48.30% (323) | oligopeptide-transport ATP-binding protein ABC transporter |
| M. vanbaalenii PYR-1 | Mvan_0435 | - | 1e-138 | 75.08% (325) | oligopeptide/dipeptide ABC transporter, ATPase subunit |
CLUSTAL 2.0.9 multiple sequence alignment
MSMEG_0640|M.smegmatis_MC2_155 ---MS--ALLQVNDLRVSFTTDGGVVRAVDGVSFDLKRGEILAVVGESGS
Mvan_0435|M.vanbaalenii_PYR-1 ---MTREPLLRVDDLRVSFATEDGVLQAVDGVSFDLTPGEVLAVVGESGC
Mb1312c|M.bovis_AF2122/97 ---MS--PLLEVTDLAVTFRTDGDPVTAVRGISYRVEPGEVVAMVGESGS
Rv1281c|M.tuberculosis_H37Rv ---MS--PLLEVTDLAVTFRTDGDPVTAVRGISYRVEPGEVVAMVGESGS
MLBr_01122|M.leprae_Br4923 ---MS--PLLEVTDLAVTFETNGEPVTAVRGISYRINAGEVVAMVGESGS
MMAR_4138|M.marinum_M ---MN--PLLEVTDLAVTFPTENDPVTAVRGISYQVAPGEVVAMVGESGS
MUL_4001|M.ulcerans_Agy99 ---MN--PLLEVTDLAVTFPTENDPVTAVRGISYQVAPGEVVAVVGESGS
MAV_1431|M.avium_104 ---MS--PLLQVTDLAVTFPAGDAPVTAVRGISYRIEPGEVVAMVGESGS
Mflv_2259|M.gilvum_PYR-GCK ----M--SLLEVRGLHVTFPTDTEAVPAVRGLDYHVESGEVVALVGESGA
TH_3537|M.thermoresistible__bu --MTS--PLLEVNDLTVTFPTDTDPVAAVRGMTFSVHPREVVALVGESGA
MAB_0722|M.abscessus_ATCC_1997 MSHVEASSALSFRSLSVTFSTDSGPVSAVDDVSFDVKPGEVLAVVGESGS
. * . .* *:* : : ** .: : : *::*:*****.
MSMEG_0640|M.smegmatis_MC2_155 GKSVTAQTLIGLTRASNSAITGAIDFDGRDINSLDDGALREIRGEHIAMV
Mvan_0435|M.vanbaalenii_PYR-1 GKSVTAQTLTGLTRSPNTRISGSVTYRGRELTGLGDDALRDIRGEEIAMV
Mb1312c|M.bovis_AF2122/97 GKSAAAMAVVGLLP-EYAQVRGSVRLQGTELLGLADNAMSRFRGKAIGTV
Rv1281c|M.tuberculosis_H37Rv GKSAAAMAVVGLLP-EYAQVRGSVRLQGTELLGLADNAMSRFRGKAIGTV
MLBr_01122|M.leprae_Br4923 GKSAAAMAVVGLLP-EYAQVRGSVRLHNTELVGLADKTMSRFRGKAIGTV
MMAR_4138|M.marinum_M GKSAAAMAVVGLLP-EYAKVRGSVRLQGTELLGLADDAMSRFRGKVIGTV
MUL_4001|M.ulcerans_Agy99 GKSAAAMAVVGLLP-EYAKVRGSVRLQGTELLGLADDAMSRFRGKVIGTV
MAV_1431|M.avium_104 GKSVSAMAVMGLLP-EHARVRGSVRLHDTELLGLGDDAMSRLRGRAVGMV
Mflv_2259|M.gilvum_PYR-GCK GKSAGAMAVVGLLP-EWAEVSGSVRLDGDELLGLDDRQMSRIRGARIGTV
TH_3537|M.thermoresistible__bu GKSASAMAVVGLLP-EYAQVSGSVRLQGRELLGLSDRQMSAIRGRSIGTV
MAB_0722|M.abscessus_ATCC_1997 GKSVSSRTAIRLLP-DTARITGSVLLDGRDVTKLSGRELAAMRGKDIAMV
***. : : * : : *:: . :: * . : :** :. *
MSMEG_0640|M.smegmatis_MC2_155 FQDPMTSLNPVYRVGDQIIEMIRAHR-DVSKAEARDKAVELLRAVGIPHP
Mvan_0435|M.vanbaalenii_PYR-1 FQDPMSSLNPVYRVGDQIVEMIRAHR-DVSKKEARERTVELLTSVGIPNP
Mb1312c|M.bovis_AF2122/97 FQDPMSALTPVYTVGDQIAEAIEVHQPRVGKKAARRRAVELLDLVGISQP
Rv1281c|M.tuberculosis_H37Rv FQDPMSALTPVYTVGDQIAEAIEVHQPRVGKKAARRRAVELLDLVGISQP
MLBr_01122|M.leprae_Br4923 FQDPMSALTPVYTVGDQITEAIKVHQPRVGKKAAHRRAVELLELVGITQP
MMAR_4138|M.marinum_M FQDPMSALTPVYTVGDQIAETIEIHQPTFSKKAARRRAVELLELVGIAQP
MUL_4001|M.ulcerans_Agy99 FQDPMSALTPVYTVGDQIAETIEIHQPTFSRKAARRRAVELLELVGIAQP
MAV_1431|M.avium_104 FQDPMSALTPVYTVGDQIAEAITIHQPRVGRKAARDRAVELLELVGIAQP
Mflv_2259|M.gilvum_PYR-GCK FQDPMSALTPVYPVGDQIAEAVRIHQRGVDARAARARAVDLLELVGISQP
TH_3537|M.thermoresistible__bu FQDPMSALTPVYTVGDQIAEALQVHQRDLSRRAARARAVELLELVGINQP
MAB_0722|M.abscessus_ATCC_1997 FQEPGAALDPLFTIGYQVAEAVRAHS-DMSRVQARARVIELLKLVRLPDP
**:* ::* *:: :* *: * : * .. *: :.::** * : .*
MSMEG_0640|M.smegmatis_MC2_155 EQRVSDYPHEFSGGMRQRVMIAMALALEPEVLIADEPTTALDVTVQAQIL
Mvan_0435|M.vanbaalenii_PYR-1 QARVRSYPHEFSGGMRQRVMIAMALALEPAVLIADEPTTALDVTVQAQIL
Mb1312c|M.bovis_AF2122/97 QRRSRAFPHELSGGERQRVVIAIAIANDPDLLICDEPTTALDVTVQAQIL
Rv1281c|M.tuberculosis_H37Rv QRRSRAFPHELSGGERQRVVIAIAIANDPDLLICDEPTTALDVTVQAQIL
MLBr_01122|M.leprae_Br4923 DRRARAFPHELSGGERQRVVIATAIANDPDLLICDEPTTALDVTVQAQIL
MMAR_4138|M.marinum_M ERRARAFPHELSGGERQRVVIAIAIANDPDLLICDEPTTALDVTVQAQIL
MUL_4001|M.ulcerans_Agy99 ERRARAFPHELSGGERQRVVIAIAIANDPDLLICDEPTTALDVTVQAQIL
MAV_1431|M.avium_104 QRRARAFPHELSGGERQRVVIAIAIANDPDLLICDEPTTALDVTVQAQIL
Mflv_2259|M.gilvum_PYR-GCK AQRARAFPHELSGGERQRVVIAIAIANDPDLLICDEPTTALDVTVQAQIL
TH_3537|M.thermoresistible__bu ERRARSFPHELSGGERQRVVIAIAIANDPDLLICDEPTTALDVTVQAQIL
MAB_0722|M.abscessus_ATCC_1997 ERRYDCYPHQLSGGQKQRVVIAIAIACDPKVIIADEPTTALDVTVQAEIL
* :**::*** :***:** *:* :* ::*.*************:**
MSMEG_0640|M.smegmatis_MC2_155 RLVDRLNQERELAVVLITHDLGVVAEVADRVVVMYAGQIVEDGTLDEIFY
Mvan_0435|M.vanbaalenii_PYR-1 RLLADLNRERELAVVLITHDLGVVAEVADRVVVMYAGQIVEDGTVDDIFY
Mb1312c|M.bovis_AF2122/97 DVLKAARDVTGAGVLIITHDLGVVAEFADRALVMYAGRVVESAGVNDLYR
Rv1281c|M.tuberculosis_H37Rv DVLKAARDVTGAGVLIITHDLGVVAEFADRALVMYAGRVVESAGVNDLYR
MLBr_01122|M.leprae_Br4923 EVLKTARDVTGAGVLIITHDLGVVTEFADQALVMYAGRVVESAQVSTLYR
MMAR_4138|M.marinum_M DVLKTARDVTGAGVLIITHDLGVVAEFADRALVMYAGRVVEKATVNDLYH
MUL_4001|M.ulcerans_Agy99 DVLKTARDVTGAGVLIITHDLGVVAEFADRALVMYAGRVVEKATVNDLYH
MAV_1431|M.avium_104 EVLKTARDITGAGVLIITHDLGVVAELADRALVMYAGRVVESAAVASLYR
Mflv_2259|M.gilvum_PYR-GCK DVLRTARDVTGAGVLIITHDLGVVAEFADRALVMYAGRAVEAAPVSDLYR
TH_3537|M.thermoresistible__bu DVLKTARDVTGAGVLVITHDLGVVAEFADRALVMYAGRAVEVASVQQLYR
MAB_0722|M.abscessus_ATCC_1997 ELLRDLRDRIGSAIVLITHNMGVVADIADRVVVMKQGKVVEIAPVERLFA
:: . .:::***::***::.**:.:** *: ** . : ::
MSMEG_0640|M.smegmatis_MC2_155 DPQHPYTWGLLGSLPRVEDTNQERLQQIPGQPPSLLNPPTGCRFAARCAH
Mvan_0435|M.vanbaalenii_PYR-1 SPQHPYTWGLLGSLARLDRPRTERLAQIAGAPPSLLDPPSGCRFAPRCAF
Mb1312c|M.bovis_AF2122/97 DRRMPYTVGLLGSVPRLDAAQGTRLVPIPGAPPSLAGLAPGCPFAPRCPL
Rv1281c|M.tuberculosis_H37Rv DRRMPYTVGLLGSVPRLDAAQGTRLVPIPGAPPSLAGLAPGCPFAPRCPL
MLBr_01122|M.leprae_Br4923 ERQMPYTVGLLGSVPRLDATQGTRLVPIPGAPPSLAGLQQECPFAPRCPL
MMAR_4138|M.marinum_M NRRMPYTIGLLGSVPRLDATQGTRLVPIPGAPPSLAGLDRGCPFAPRCPL
MUL_4001|M.ulcerans_Agy99 NRRMPYTIGLLGSVPRLDATQGTRLVPIPGAPPSPAGLDRGCPFAPRCPL
MAV_1431|M.avium_104 DRRMPYTVGLLGSVPRLDAAQGTRLVPIPGAPPSLAGLDPGCPFAPRCPL
Mflv_2259|M.gilvum_PYR-GCK NRRMPYTAGLLGSVPRLDATQGTRLVPIPGAPPSVTNLPPGCPFTPRCPL
TH_3537|M.thermoresistible__bu DRRMPYTVGLLGSVPRLDAAQGTRLVPIPGAPPAMTDLPPGCPFAPRCPL
MAB_0722|M.abscessus_ATCC_1997 EPAEPYTRVLLAAVPHLGQGD-----PEHGAEPREDIGEP--------VL
. *** **.::.:: * *
MSMEG_0640|M.smegmatis_MC2_155 AFSKCT-QPPPLEDRKGD--------------------------------
Mvan_0435|M.vanbaalenii_PYR-1 QFDRCD-QPPPL-DHDGG--------------------------------
Mb1312c|M.bovis_AF2122/97 VIDECLTAEPELLDVATDHRAACIRTELVTGRSAADIYRVKTEARPA-AL
Rv1281c|M.tuberculosis_H37Rv VIDECLTAEPELLDVATDHRAACIRTELVTGRSAADIYRVKTEARPA-AL
MLBr_01122|M.leprae_Br4923 VVDECRLREPELVEVRAGHRTACIRTDQVSGRSAADIYGINTDTRTS-AT
MMAR_4138|M.marinum_M VIDECRSDEPELIEVGQNHRAACIRTDQVNGRSAADIYGVQTEATEP-AP
MUL_4001|M.ulcerans_Agy99 VIDECRSDEPELIEVGQNHRAACIRTDQVNGRSAADIYGVQTEATEP-AP
MAV_1431|M.avium_104 AIDECRSQEPELLPVGPDHRAACIRTDQVDGRSAADIYGVRTQPHPG-EP
Mflv_2259|M.gilvum_PYR-GCK AVDECSTAEPPLESVAPNHQVACIRNGDVAGRSAAEIYGVSTSPPRTEAA
TH_3537|M.thermoresistible__bu AIDDCRAAEPELLEITP------------AG-------------------
MAB_0722|M.abscessus_ATCC_1997 EVSHLVVEFPGLLGRAA---------------------------------
.. * *
MSMEG_0640|M.smegmatis_MC2_155 -------------------------------GHLDRCWLTPEEKRTLR--
Mvan_0435|M.vanbaalenii_PYR-1 -------------------------------THLDRCWLGGDVKAEVRP-
Mb1312c|M.bovis_AF2122/97 GDASVVVRVRHLVKTYRLAKGVVLRRAIGEVRAVDGISLELRQGRTLGIV
Rv1281c|M.tuberculosis_H37Rv GDASVVVRVRHLVKTYRLAKGVVLRRAIGEVRAVDGISLELRQGRTLGIV
MLBr_01122|M.leprae_Br4923 SDSSVVVRVRDLVKTYRLTKGVGLRRAIGEIRAVNGVSFELQQGRTLGIV
MMAR_4138|M.marinum_M ADSSVVVRVSDLVKTYPLTKGVLLRRSIGEVRAVDGVNFELRQGHTLGIV
MUL_4001|M.ulcerans_Agy99 ADSSVVVRVSDLVKTYPLTKGVLLRRSIGEVRAVDGVSFELRQGHTLGIV
MAV_1431|M.avium_104 ANSPVVVRVRELSKTYRLTKG-VLRRSAGEVRAVDRISFQLRQGRTLGIV
Mflv_2259|M.gilvum_PYR-GCK SEDAVALRVEGLTKTFTLTKGLVFRRRIGEVRAVDGISFELQQGRTLGIV
TH_3537|M.thermoresistible__bu -------------------------PGHGEHRAAX---XXLASAVALGTR
MAB_0722|M.abscessus_ATCC_1997 ------------------------------FRAVDDVSFGIGRGKTLGLV
:
MSMEG_0640|M.smegmatis_MC2_155 --------------------------------------------------
Mvan_0435|M.vanbaalenii_PYR-1 --------------------------------------------------
Mb1312c|M.bovis_AF2122/97 GESGSGKSTTLHEILELAAPQSGSIEVLGTDVATLGTAERRSLRRDIQVV
Rv1281c|M.tuberculosis_H37Rv GESGSGKSTTLHEILELAAPQSGSIEVLGTDVATLGTAERRSLRRDIQVV
MLBr_01122|M.leprae_Br4923 GESGSGKSTTLHEILRLAVPQSGSIEVLGIDVATLNRASRRSMRRNIQVV
MMAR_4138|M.marinum_M GESGSGKSTTLHQILELAAPQSGSIEVLGTDVTTLTASSRRALRRDIQVV
MUL_4001|M.ulcerans_Agy99 GESGSGKSTTLHQILELAAPQSGSIEVLGTDVTTLTASSRRALRRDIQVV
MAV_1431|M.avium_104 GESGSGKSTTLHEILELVAPQSGSIEVLGTDVAALSPASRRSLRRDIQVV
Mflv_2259|M.gilvum_PYR-GCK GESGSGKSTTLHQILELSPPQAGTIEVLGRDVAALDRAGRRALRSDLQVV
TH_3537|M.thermoresistible__bu RPGG----------------------------------------------
MAB_0722|M.abscessus_ATCC_1997 GESGSGKSTIGRCVAALQQPAAGSVRVLGQEIVGMSQRKLRPLRAKFGFV
MSMEG_0640|M.smegmatis_MC2_155 --------------------------------------------------
Mvan_0435|M.vanbaalenii_PYR-1 --------------------------------------------------
Mb1312c|M.bovis_AF2122/97 FQDPVASLDPRLPVFDLIAEPLQANGFG-KNETHARVAELLDIVGLRHGD
Rv1281c|M.tuberculosis_H37Rv FQDPVASLDPRLPVFDLIAEPLQANGFG-KNETHARVAELLDIVGLRHGD
MLBr_01122|M.leprae_Br4923 FQDPVASLDPRLPVFELIAEPLHANGFS-KNYTQMRVAELLDIVGLRRDD
MMAR_4138|M.marinum_M FQDPVASLDPRLPISDLLAEPLQANGFN-KTDTQDRVAELLDIVGLRRSD
MUL_4001|M.ulcerans_Agy99 FQDPVASLDPRLPISDLLAEPLQANGFN-KTDTQDRVAELLDIVGLRRSD
MAV_1431|M.avium_104 FQDPVASLDPRLPVFELLAEPLRANGFD-KDHTNARVAELLETVGLRRAD
Mflv_2259|M.gilvum_PYR-GCK FQDPVASLDPRLPVFDILAEPLQDNGFD-KAAIRDRIAELLGVVGLRRED
TH_3537|M.thermoresistible__bu --------------------------------------------------
MAB_0722|M.abscessus_ATCC_1997 FQDPATALNPKMRVGDCIAEPMWVHRYGDRGKIVARVAELIDAVQLPSGT
MSMEG_0640|M.smegmatis_MC2_155 --------------------------------------------------
Mvan_0435|M.vanbaalenii_PYR-1 --------------------------------------------------
Mb1312c|M.bovis_AF2122/97 ASRYPAEFSGGQKQRIGIARALALQPKILALDEPVSALDVSIQAGIINLL
Rv1281c|M.tuberculosis_H37Rv ASRYPAEFSGGQKQRIGIARALALQPKILALDEPVSALDVSIQAGIINLL
MLBr_01122|M.leprae_Br4923 ATRYPTEFSGGQKQRIGIARALALQPKILAFDEPVSALDVSIQAGIINLL
MMAR_4138|M.marinum_M ASRYPAEFSGGQKQRIGIARALALQPKILALDEPVSALDVSIQAGIINLL
MUL_4001|M.ulcerans_Agy99 ASRYPAEFSGGQKQRIGIARALALQPKILALDEPVSALDVSIQAGIINLL
MAV_1431|M.avium_104 AARYPAEFSGGQKQRIGIARALALQPKILALDEPVSALDVSIQAGIINLL
Mflv_2259|M.gilvum_PYR-GCK ASRYPAEFSGGQKQRIGIARALALRPKILALDEPVSALDVSIQAGIVNLL
TH_3537|M.thermoresistible__bu --------------------------------------------------
MAB_0722|M.abscessus_ATCC_1997 ENRYPHELSGGQRQRANLARALALGPDLLVADEPTSALDVSVQAAVLDLF
MSMEG_0640|M.smegmatis_MC2_155 --------------------------------------------------
Mvan_0435|M.vanbaalenii_PYR-1 --------------------------------------------------
Mb1312c|M.bovis_AF2122/97 LDLQEQFGLSYLFVSHDLSVVKHLAHQVAVMLAGTVVEQGDSEEVFGNPK
Rv1281c|M.tuberculosis_H37Rv LDLQEQFGLSYLFVSHDLSVVKHLAHQVAVMLAGTVVEQGDSEEVFGNPK
MLBr_01122|M.leprae_Br4923 LDLQDRLGLSYLFVSHDLSVIKHLAHQVAVMLAGTIVEQGDSHDVFRNPQ
MMAR_4138|M.marinum_M LDLQARFKLSYLFVSHDLSVVKHLAHSVVVMFAGSIVEQGNSQEVFSNPQ
MUL_4001|M.ulcerans_Agy99 LDLQAGFKLSYLFVSHDLSVVKHLANSVVVMFAGSIVEQGNSQEVFSNPQ
MAV_1431|M.avium_104 LDLQAQFQLSYLFVSHDLSVVKHLAHDVAVMYAGSIVEQGDSSQVFGNPQ
Mflv_2259|M.gilvum_PYR-GCK LDLQERFGLAYLFVSHDLSVVRHLAHRVAVMNKGVIVEQGDSDQVFGSPR
TH_3537|M.thermoresistible__bu --------------------------------------------------
MAB_0722|M.abscessus_ATCC_1997 EELQRQWRFACLFISHDLAVVDRLADEVAVLRHGVLEELGPRGEILHNPS
MSMEG_0640|M.smegmatis_MC2_155 --------------------------
Mvan_0435|M.vanbaalenii_PYR-1 --------------------------
Mb1312c|M.bovis_AF2122/97 HEYTRRLLGAVPQPDPARRG------
Rv1281c|M.tuberculosis_H37Rv HEYTRRLLGAVPQPDPARRG------
MLBr_01122|M.leprae_Br4923 HDYTRRLLGAIPRPEVG---------
MMAR_4138|M.marinum_M HEYTQRLLGAVPQPIPGNAD------
MUL_4001|M.ulcerans_Agy99 HEYTQRLLGAVPQPIPGNAD------
MAV_1431|M.avium_104 HEYTRRLLDAVPQPNPGSRG------
Mflv_2259|M.gilvum_PYR-GCK HDYTRRLLDAVPRPQADRR-------
TH_3537|M.thermoresistible__bu --------------------------
MAB_0722|M.abscessus_ATCC_1997 RAYTRALVAAVPVPDPVKQRARRNGH