For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. smegmatis MC2 155 MSMEG_0486 (-)

NGKRLRSPAAALVVLTMLLVSGCAGSAPQRTDGKTAVRISQAFQSLLYLPLYVAKEKGYFEEQNIHAEIS
TGGGGTQSWTAVLGGSADFSIQDPVFVPKSHENGGPGVVVAAIQNAPSVFVIGRENNDGTLDNSSIFEGK
KVAVSPEPDTSWAFMTYLIEQDTLRDVSLVNVALGSELAAVASGQADYALSFEPTVSQAVVDQNLDVVYS
FAANPSWNPFAFSSLTSTDRYLQQNPEAAQGVVTAIAKAARFIYSEPEATVDIATEYFPDLSREVIEAAV
QREIEAKGYAEDVTVTRQSWDNNMRISLFTKNIAAYPSDATSYENNVNTDLAANARTALATD*

Operon Prediction Model: Genebank

Paralogs

species	id	gene	e-value	identity (len)	annotation
M. smegmatis MC2 155	MSMEG_0486	-	-	100% (343)	putative ABC transporter, periplasmic protein
M. smegmatis MC2 155	MSMEG_2634	-	4e-11	23.33% (270)	hypothetical protein MSMEG_2634
M. smegmatis MC2 155	MSMEG_2099	-	6e-11	25.19% (270)	ABC transporter, substrate binding protein

Closest Orthologs (e-value cutoff: 1e-4)

species	id	gene	e-value	identity (len)	annotation
M. bovis AF2122 / 97	-	-	-	-	-
M. gilvum PYR-GCK	-	-	-	-	-
M. tuberculosis H37Rv	-	-	-	-	-
M. leprae Br4923	-	-	-	-	-
M. abscessus ATCC 19977	-	-	-	-	-
M. marinum M	-	-	-	-	-
M. avium 104	MAV_0141	-	6e-06	20.39% (255)	sulfonate binding protein
M. thermoresistible (build 8)	-	-	-	-	-
M. ulcerans Agy99	-	-	-	-	-
M. vanbaalenii PYR-1	-	-	-	-	-

CLUSTAL 2.0.9 multiple sequence alignment


MSMEG_0486|M.smegmatis_MC2_155      MNGKRLRSPAAALVVLTMLLVSGCAGSAPQRTDGKTAVRISQAFQSLLYL
MAV_0141|M.avium_104                ---MRPRHLTALAVVAAVTAVSGCGSSS--GTTTTKDLHLDYAYYNPLSL
                                        * *  :*  ** ::  ****..*:   *  .. :::. *: . * *

MSMEG_0486|M.smegmatis_MC2_155      PLYVAKEKGYFEEQNIHAEISTGGGGTQSWTAVLGGSADFSIQDPVFVPK
MAV_0141|M.avium_104                ---VIRDQQLLEKKGYHVTWVLSQGSNKANEGLRSKALDFGSTGGSPALL
                                       * :::  :*::. *.    . *..::  .: . : **.  .   .  

MSMEG_0486|M.smegmatis_MC2_155      SHENGGPGVVVAAIQNAPSVFVIGRENNDGTLDNSSIFEGKKVAVSPEPD
MAV_0141|M.avium_104                ARANGTPIKTVDVYARGEWTALVVAKNS--PINAVADLKGKKVAVTKGTD
                                    :: ** *  .* .  ..  . ::  :*.  .::  : ::******:  .*

MSMEG_0486|M.smegmatis_MC2_155      TSWAFMTYLIEQDT-LRDVSLVNVALGSELAAVASGQADYALSFEPTVSQ
MAV_0141|M.avium_104                PYFFLLQSLATAGLSPADIEIVNLQHADGKTALERGDVDAWSGLDPFMAE
                                    . : ::  *   .    *:.:**:  ..  :*:  *:.*   .::* :::

MSMEG_0486|M.smegmatis_MC2_155      AVVDQNLDVVYSFAANPSWNPFAFSSLTSTDRYLQQNPEAAQGVVTAIAK
MAV_0141|M.avium_104                TIQQQGSRIIY---RNPDFN--SGGVLNAREDFITAHPDSVQLVVDTYEE
                                    :: :*.  ::*    **.:*  : . *.: : ::  :*::.* ** :  :

MSMEG_0486|M.smegmatis_MC2_155      AARFIYSEPEATVDIATEYFPDLSREVIEAAVQREIEAKGYAEDVTVTRQ
MAV_0141|M.avium_104                ARKWAKTHPAELAALLAS-----QAKVSQSVAQEELGRT--ALDIDPVPG
                                    * ::  :.*   . : :.     . :* ::..*.*:  .  * *:  .  

MSMEG_0486|M.smegmatis_MC2_155      SWDNNMRISLFTKNIAAYPSDATSYENNVNTDLAANARTALATD
MAV_0141|M.avium_104                DWLRAVLTRIEPLAVADGDIKSDDAGRNALNTLIEPKYARQAR-
                                    .* . :   : .  :*    .: .  .*. . *     :  *