For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
NVTHEITVDLDRPLIADPRAGHNRWHPDIPAVLRCVPGDIVAIDTRDGYDGQFGRASTADDVLRADLARI HPLTGPIHIEGAEPGDLLVVDVLSVDTGNFGATLNIPGFGFLREEFTEPHIVRWEIADGFAHSADLPGVR LPGAPFMGVMGVAPSRALFDRTKAAEQRAAQGGGLVELPNPTSAVPPDRAADPGRRTISPTEAAGNVDIK HLTAGSRVHLPVWVPGALFSVGDGHFAQGDGESCGAAVETTARVVLRFDLRKGAAAAQDSPHLSFERLTP GPPDVASRPHFAVTGIPVDSAGEIHPENLNMATRNALRLMVDHLSVDRGFTRQQAYALCSVAVDLRLSQI VDAPNILVSALIPTDIFV*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_0484 | - | - | 100% (369) | formamidase |
| M. smegmatis MC2 155 | MSMEG_4367 | - | 1e-51 | 35.79% (394) | formamidase |
| M. smegmatis MC2 155 | MSMEG_5335 | - | 2e-49 | 34.25% (400) | formamidase |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_5147 | - | 1e-26 | 34.39% (253) | acetamidase/formamidase |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_0587 | - | 4e-53 | 37.34% (383) | acetamidase/formamidase |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | - | - | - | - | - |
| M. thermoresistible (build 8) | TH_0852 | - | 4e-25 | 31.78% (321) | acetamidase/Formamidase family protein |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_0290 | - | 2e-25 | 29.89% (378) | acetamidase/formamidase |
CLUSTAL 2.0.9 multiple sequence alignment
TH_0852|M.thermoresistible__bu LSAGAGIATTLGACSSRSTVRATGASTDFEILQPGQGEITGDHYLQSVP-
Mvan_0290|M.vanbaalenii_PYR-1 --------------------------MIFPTLHPGEGHIGGEHYLPSHP-
MSMEG_0484|M.smegmatis_MC2_155 ------------------MNVTHEITVDLDRPLIADPRAGHNRWHPDIPA
MAB_0587|M.abscessus_ATCC_1997 -------------------MPEVLFPLDSNKKFTEQQIIGHNRWHPDIPP
Mflv_5147|M.gilvum_PYR-GCK ---------------------------MEHVTFIPTPDQYRYTFGGAAP-
: *
TH_0852|M.thermoresistible__bu -DQVLWGYVPTVHATPVMQMRSGQTVTIDTVSHEGILEDQGRNPVEYFGA
Mvan_0290|M.vanbaalenii_PYR-1 -DEVLWGWLPNAQTRPALSVASGDTVTIDTVSHEGILEDQGRDPVSYFAQ
MSMEG_0484|M.smegmatis_MC2_155 VLRCVPGDIVAIDTRDGYDGQFGRASTADDVLRADLARIHPLTGPIHIEG
MAB_0587|M.abscessus_ATCC_1997 AAVVKPGTSFRVHCREWFDGAIHNDDSADDIRDAPLTTVHALSGPFSVEG
Mflv_5147|M.gilvum_PYR-GCK VMRIKPQTVLTLWAEDAYGGRITSADDVASAVLD-TPDLNPQTGPFHVEG
: .
TH_0852|M.thermoresistible__bu EGVDENDVLEDVIAVAAEYDRTPRDFDKDGPHVVTGPIFIEGAEPGDVLK
Mvan_0290|M.vanbaalenii_PYR-1 FGVTN--VLKDVIDIASS---PLAHDDSCGPHIVTGPVRVANADPGDVLK
MSMEG_0484|M.smegmatis_MC2_155 AEPGD-LLVVDVLSV----------DTG-----NFGAT---LNIPGFGFL
MAB_0587|M.abscessus_ATCC_1997 AQPGD-LLIVDILDVGPI----PQEDSGPLAGQGWGYTGIFPTVNGGGFL
Mflv_5147|M.gilvum_PYR-GCK AEPGD------------------------------------------TLA
: :
TH_0852|M.thermoresistible__bu IETLEATPRVPYGVVSSRHGKGALALTADGTPPAGITLDEVMPPAVTDGR
Mvan_0290|M.vanbaalenii_PYR-1 IEVLDLAMRVPYGFVSSRHGYGALAGEFPEFP------DSEPVREVDQIV
MSMEG_0484|M.smegmatis_MC2_155 REEFTEPHIVRWEIADGFAHSADLPG--------------VRLPGAPFMG
MAB_0587|M.abscessus_ATCC_1997 TEQFPDAYKAIWDFSGQTATSRHVPG--------------VRFTGIVHPG
Mflv_5147|M.gilvum_PYR-GCK IHLVDLTPARTWGASTLIPFFGGLTS------------------VPVSPT
. . . : :.
TH_0852|M.thermoresistible__bu SNPDPTRYGNLSTFTAVEDGHGVMSYGDAR-VRFPLAPFMGIMGVAFAQD
Mvan_0290|M.vanbaalenii_PYR-1 SMGTICHFSWVEMLQGKPYGKIAAGHGSGRTVQFPVNPFLGIMGVARAT-
MSMEG_0484|M.smegmatis_MC2_155 VMGVAPSRALFDRTKAAEQRAAQGG-----GLVELPNPTSAVP-------
MAB_0587|M.abscessus_ATCC_1997 LMGTAPSAELLARWNAREGALIATDPNRVPALALPPEPRDAVLGALSGDS
Mflv_5147|M.gilvum_PYR-GCK LQDPLPERTWIYEYDSAAETLAFNAHGSDFSVALPANPMLGTVG------
. . : * .
TH_0852|M.thermoresistible__bu RDPTAPTA-NSVPPTIAGGNIDIRLLGEGSTLYLPVFAEGALFYVGDPHM
Mvan_0290|M.vanbaalenii_PYR-1 EDPVP-----SVPPGTHGGNIDIKHVVTGSTLYLPVQVEGANFFAGDPHF
MSMEG_0484|M.smegmatis_MC2_155 PDRAADPGRRTISPTEAAGNVDIKHLTAGSRVHLPVWVPGALFSVGDGHF
MAB_0587|M.abscessus_ATCC_1997 FDRAAAEAARTAPPRENGGNQDIKNLTKGSRVFYPVFVPGGKLSVGDLHF
Mflv_5147|M.gilvum_PYR-GCK VAPDRREVRTALVPDIFGGNMDTPEMAAGATCYLRVNVPGALFSLGDGHY
: * .** * : *: . * . *. : ** *
TH_0852|M.thermoresistible__bu AMGDGE-VALTAMEGSLRGTYRLTVCKPGSGDAPSVAYHYPFAETG----
Mvan_0290|M.vanbaalenii_PYR-1 AQGNGE-VALTALEASLRATVRLTVLKSGDAHSAIGALTNPVVETA----
MSMEG_0484|M.smegmatis_MC2_155 AQGDGE-SCGAAVETTARVVLRFDLRKGAAAAQDSPHLSFERLTPGPPDV
MAB_0587|M.abscessus_ATCC_1997 SQGDGEITFCGAIEMGGFIDLHVDVIKGGMDTYG--VFENAIFMPGNTDP
Mflv_5147|M.gilvum_PYR-GCK RQGEGE-SCGTAVEGAMHVTAIVDLIKGGNSAWPRLETDTHLMCVGSGRP
*:** *:* . : * . .
TH_0852|M.thermoresistible__bu --DAWVPIGLSDPDGSVGGQGTDLDVAMRRAVANALDFLENDRGMDRATA
Mvan_0290|M.vanbaalenii_PYR-1 --THWIPTGMD----------ADLDEAMRIAVRNAIAFLNTRFGVPRDVA
MSMEG_0484|M.smegmatis_MC2_155 ASRPHFAVTGIPVDSAGEIHPENLNMATRNALRLMVDHLSVDRGFTRQQA
MAB_0587|M.abscessus_ATCC_1997 QYSQWLAFSGTSVTLDDEQRYLDSHLAYQRACLHAIDYLTK-FGYSPEQA
Mflv_5147|M.gilvum_PYR-GCK MEEAWRASQVEMITWLGELYGLDRYDAYQLLTQISLCPIANVVDTN----
. : * : : : .
TH_0852|M.thermoresistible__bu YAYLSAA-SHFAISQVVDRTVGVHGQIFKSHFAA----------------
Mvan_0290|M.vanbaalenii_PYR-1 LAYLSAA-GDFEVSQVVDAVKGVHCMIRKADWAAWL--------------
MSMEG_0484|M.smegmatis_MC2_155 YALCSVA-VDLRLSQIVDAPNILVSALIPTDIFV----------------
MAB_0587|M.abscessus_ATCC_1997 YLLLGAAPIEGRLSGVVDIPNSCATVYIPTAIFDFPVTPTASGPVRIDPG
Mflv_5147|M.gilvum_PYR-GCK --YSTVTKIDKRLLPTAPAYGGLHSELRSAAAALGSVNY-----------
.: . : . :
TH_0852|M.thermoresistible__bu ---------
Mvan_0290|M.vanbaalenii_PYR-1 ---------
MSMEG_0484|M.smegmatis_MC2_155 ---------
MAB_0587|M.abscessus_ATCC_1997 PGAPRSVAR
Mflv_5147|M.gilvum_PYR-GCK ---------