For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. smegmatis MC2 155 MSMEG_0214 (-)

annotation: L-sorbosone dehydrogenase
coordinates: 240488 - 241771
length: 427

RAWPGISAVVVTASVVLAGCGTEPQTTEPTAQPSRSSSQTTAEHPAGAAELTPVTVEVPEGLDDAPLDQP
RQALVPDGWTLEVVARVPKARMAAWAPDGALLVSVPSTGEVLKVLPTQSTLLDGLDQPHGLFFAGPTLYV
AESDQIDAYDYADGAAVNRRTVIDGLPDAKSPDLRGAYAHALKSVVVGDDGAVYFSIGSTGNISAEDRTA
DPPRATIMRVPPGGGPAEPFATGVRNGTGLAFAPDGSLWTAVNNRDNVADPDGRVVQSYVDDHPPESVAR
LTPGRELGWPYCNPDGPPPAKLIRDLQTNPDGAEMDCAALPPIEQTLGAHSAPLGMSFAELPQPFGQGAL
VGVHGSWNRDAPRAPEVSFFAWRDGTLGPQQTLVGGFQDDDGQRWGRPVAAVTGPDGAVYITDDFAGAVY
RLAPPP*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. smegmatis MC2 155MSMEG_0214--100% (427)L-sorbosone dehydrogenase
M. smegmatis MC2 155MSMEG_1214-3e-0722.83% (381) oxidoreductase
M. smegmatis MC2 155MSMEG_5629-1e-0627.00% (237) hypothetical protein MSMEG_5629

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97-----
M. gilvum PYR-GCKMflv_0697-1e-16767.36% (435) SMP-30/gluconolaconase/LRE-like region
M. tuberculosis H37Rv-----
M. leprae Br4923-----
M. abscessus ATCC 19977-----
M. marinum M-----
M. avium 104MAV_5210-1e-0528.14% (167) hypothetical protein MAV_5210
M. thermoresistible (build 8)TH_2267-6e-0824.06% (374) oxidoreductase
M. ulcerans Agy99-----
M. vanbaalenii PYR-1Mvan_0146-1e-16668.84% (430) SMP-30/gluconolaconase/LRE-like region

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_0697|M.gilvum_PYR-GCK          --------MRESVRHNRIGVLVLGCALLAGCSGEQSSPSSTPTPT-----
Mvan_0146|M.vanbaalenii_PYR-1       --------MRDLVRHKPIGAILLGVALLAGCTAER---QAEPSPT-----
MSMEG_0214|M.smegmatis_MC2_155      --------MRAWPGIS--AVVVTASVVLAGCGTEPQTTEPTAQPS-----
TH_2267|M.thermoresistible__bu      -----VAVGRIRRTTVRAAVALMCLALLAAACDGEAVPAPPAPPE-----
MAV_5210|M.avium_104                MPAIDVAPGWRLDRVTAPSRLFGANGLRTGPDGRIYIAQVTGSQISALDH
                                                      .  .    : :.                    

Mflv_0697|M.gilvum_PYR-GCK          -AAPSSSSTSTTQPVAGTQTVTVEVAPDLGDSPFDEPRQ-AVVPKGWTLS
Mvan_0146|M.vanbaalenii_PYR-1       -APPP-ASTTPAAPAAGTARVTVEVDADLAGAPFDAPRE-AMVPQGWTLS
MSMEG_0214|M.smegmatis_MC2_155      -RSSSQTTAEHPAGAAELTPVTVEVPEGLDDAPLDQPRQ-ALVPDGWTLE
TH_2267|M.thermoresistible__bu      -QPPAQTGESGARDVVTDLGVPWGIAFLPDGSALIAERDSGMIKQLSEPG
MAV_5210|M.avium_104                HTGELETASPKGGDIVAPDDVAFDAAGNLYATEVMDGRVSVRDTGGRTRV
                                          :        .    *.         : .   *            

Mflv_0697|M.gilvum_PYR-GCK          VWARTSRPRLMAWAPDGALLVSVPSTGQVLSFRPRGDGPPEESVLLDDLD
Mvan_0146|M.vanbaalenii_PYR-1       VWARTPRPRLAAWTPDGDLLVSVPSAGRVLRFEPRGDGPPDESVLLDGLD
MSMEG_0214|M.smegmatis_MC2_155      VVARVPKARMAAWAPDGALLVSVPSTGEVLKVLP------TQSTLLDGLD
TH_2267|M.thermoresistible__bu      VVRDVGAVEGVAARGEGGLLGLATAGDTVFAYHT----------------
MAV_5210|M.avium_104                LRDDVPSANGITFHRGRLFIGECRERGRLLEFDLAGG---PPRVLLDNVP
                                    :   .   .  :      ::      . ::                    

Mflv_0697|M.gilvum_PYR-GCK          EPHGLAFDGPTLYVAQSDQVDGYDYAGGAATNPRVVAGGLPDDRSPDLRG
Mvan_0146|M.vanbaalenii_PYR-1       EPHGLAFDGSTLYVAESDQVDAYRYAAGAATEPRTVAGGLPDDRSPDLRG
MSMEG_0214|M.smegmatis_MC2_155      QPHGLFFAGPTLYVAESDQIDAYDYADGAAVNRRTVIDGLPDAKSPDLRG
TH_2267|M.thermoresistible__bu      -------------TATDNRVVRMDFDGQALGPPAPILTGIP-------TG
MAV_5210|M.avium_104                SPNAMEVGPDGLLYFPVMGANEIWRVDPDGGEPQCVATGLGVPDSVKFDA
                                                                       :  *:         .

Mflv_0697|M.gilvum_PYR-GCK          AYSHVLKSVAVGPDGAVYFSIG-----STGNISADDRDATPPRATIMRVP
Mvan_0146|M.vanbaalenii_PYR-1       AYAHALKSVAVGPDGAVYFSIG-----STGNISAQDRSADPPRATVMRVP
MSMEG_0214|M.smegmatis_MC2_155      AYAHALKSVVVGDDGAVYFSIG-----STGNISAEDRTADPPRATIMRVP
TH_2267|M.thermoresistible__bu      GSRHDGGRIAFGPDGRLYVATG-----EIGDPPLAQDRSSLAGKILRINP
MAV_5210|M.avium_104                RGHIVSTQVASGQVLRIDPRSGEQQVLAQLNPGLDNCTFVGDRLFVSNFT
                                            :. *    :    *        :    :         :   .

Mflv_0697|M.gilvum_PYR-GCK          PGGGPAEP-------FATGVRNGTGLAVAPDGAVWIANNGRDNIAFPDPE
Mvan_0146|M.vanbaalenii_PYR-1       PGGGRAEP-------FATGVRNGTGLAVAPDGAVWTANNGRDNVAYPEPG
MSMEG_0214|M.smegmatis_MC2_155      PGGGPAEP-------FATGVRNGTGLAFAPDGSLWTAVNNRDNVADPD--
TH_2267|M.thermoresistible__bu      DGSIPADNPDPQSPVWSFGHRNVQGLAWDPGGRLWATEYG----------
MAV_5210|M.avium_104                GEITEISPDGTTRSVLPGGLNWPLDLAVGHDGRLYVADGTYFYAALPDGA
                                          .         . * .   .**   .* :: :             

Mflv_0697|M.gilvum_PYR-GCK          PSYGEVLPDY--------VDDNPPEQIARLTPGRELG--WPYCNN-----
Mvan_0146|M.vanbaalenii_PYR-1       PSYGQVIPEY--------VNDNPPEQIARLTPGRELG--WPYCNN-----
MSMEG_0214|M.smegmatis_MC2_155      ---GRVVQSY--------VDDHPPESVARLTPGRELG--WPYCN------
TH_2267|M.thermoresistible__bu      --------------------ADTWDELNLIEPGGNYG--WPVAE------
MAV_5210|M.avium_104                LHTVGMLFSPGYPGFLRGVAASGPGEFVVTTSGGQISRYRPQASESEVLA
                                                             ..    .* : .   * ..      

Mflv_0697|M.gilvum_PYR-GCK          -----VGAPADLPFVRDVQTNPDGELLDCAALPPVEQSMGAHSAPLGLSF
Mvan_0146|M.vanbaalenii_PYR-1       -----VDGPADLPFVRDVQTNPDGALLDCAALPPVEQSMGAHSAPLGLSF
MSMEG_0214|M.smegmatis_MC2_155      -----PDGPPPAKLIRDLQTNPDGAEMDCAALPPIEQTLGAHSAPLGMSF
TH_2267|M.thermoresistible__bu      -----------------------GRQEMPGMIDPVLQWRPAEASPSGLAF
MAV_5210|M.avium_104                DGFDQLYGIAPGPAGVVVAELGTGRVLSLQRSGAVEVLAAGLREPVGVAI
                                                           *         .:     .   * *:::

Mflv_0697|M.gilvum_PYR-GCK          TDG--VLPEPYASGALVGVHGS----WNRQPPRAPEVSFYPWRDGGLGDQ
Mvan_0146|M.vanbaalenii_PYR-1       VDG--ELPAPFQRGALVGVHGS----WNRQPPRAPEVSFYPWQDGTLGGQ
MSMEG_0214|M.smegmatis_MC2_155      AE----LPQPFGQGALVGVHGS----WNRDAPRAPEVSFFAWRDGTLGPQ
TH_2267|M.thermoresistible__bu      WDG---------ALWIANLRGQ----RLLEVPVRADGELGEPVSRFVGEY
MAV_5210|M.avium_104                GSDGAALVAEAGAGRVVRVDGSKVDTVMADLQRPQGILLHGGVLYVVDAG
                                     .             :. : *.       :        :       :.  

Mflv_0697|M.gilvum_PYR-GCK          QTLVGGFQADDGSRWGRPVAATTGP-------------------------
Mvan_0146|M.vanbaalenii_PYR-1       QTLVGGFQTDDGTRWGRPVAAVVGP-------------------------
MSMEG_0214|M.smegmatis_MC2_155      QTLVGGFQDDDGQRWGRPVAAVTGP-------------------------
TH_2267|M.thermoresistible__bu      GRLRTVVAAPDGSLW-----FTTSN-------------------------
MAV_5210|M.avium_104                AKELIAFDPADKTRRTIASGLPVGPPPGVNPKPLKGMPPFSGPQGPFAGI
                                          .   *           ..                          

Mflv_0697|M.gilvum_PYR-GCK          ----DGSVYITDDAADAIYRLTPPA---
Mvan_0146|M.vanbaalenii_PYR-1       ----DGAVYITDDAADAIYRLAPG----
MSMEG_0214|M.smegmatis_MC2_155      ----DGAVYITDDFAGAVYRLAPPP---
TH_2267|M.thermoresistible__bu      ----RDGRGVPRSGDDRILRYRR-----
MAV_5210|M.avium_104                TAAADGTLYVSADGEGSVLALRPTRDGH
                                         .   :. .  . :