For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VGKNERTKIVMSDEEIAEFVERSRTATMATVLPDGRPHLVAMWYAVVDGEIWFETKAKSQKAVNLRRDPT VTVLIEDGHTYDTLRGVSIDGTAEIVDDPETLLRVGISVWERYTGPYTDEMRPFVDQMMNNRIAVRVVPG RTRSWDHRKLGMPAMPLGGSTAQYLNS
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_0048 | - | - | 100% (167) | pyridoxamine 5'-phosphate oxidase family protein |
M. smegmatis MC2 155 | MSMEG_3380 | - | 9e-08 | 30.40% (125) | pyridoxamine 5'-phosphate oxidase-related, FMN-binding |
M. smegmatis MC2 155 | MSMEG_6848 | - | 2e-06 | 28.57% (140) | putative oxidoreductase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3015 | - | 7e-68 | 71.60% (162) | hypothetical protein Mb3015 |
M. gilvum PYR-GCK | Mflv_0791 | - | 5e-84 | 86.67% (165) | pyridoxamine 5'-phosphate oxidase-related, FMN-binding |
M. tuberculosis H37Rv | Rv2991 | - | 2e-68 | 72.22% (162) | hypothetical protein Rv2991 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_3296 | - | 7e-71 | 75.31% (162) | hypothetical protein MAB_3296 |
M. marinum M | MMAR_1720 | - | 1e-68 | 71.60% (162) | hypothetical protein MMAR_1720 |
M. avium 104 | MAV_3840 | - | 7e-69 | 72.22% (162) | pyridoxamine 5'-phosphate oxidase family protein |
M. thermoresistible (build 8) | TH_0229 | - | 6e-79 | 81.93% (166) | CONSERVED HYPOTHETICAL PROTEIN |
M. ulcerans Agy99 | MUL_1960 | - | 8e-69 | 71.60% (162) | hypothetical protein MUL_1960 |
M. vanbaalenii PYR-1 | Mvan_0059 | - | 4e-84 | 89.09% (165) | pyridoxamine 5'-phosphate oxidase-related, FMN-binding |
CLUSTAL 2.0.9 multiple sequence alignment Mb3015|M.bovis_AF2122/97 MGTKQRADIVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGE Rv2991|M.tuberculosis_H37Rv MGTKQRADIVMSEAEIADFVNSSRTGTLATIGPDGQPHLTAMWYAVIDGE MMAR_1720|M.marinum_M MGTKQRADIVMSEAEIANFVTTSRTGTLATIGPNGQPHLTAMWYAVVDGE MUL_1960|M.ulcerans_Agy99 MGTKQRADIVMSEAEIANFVTTSRTGTLATIGPNGQPHLTAMWYAVVDGE MAV_3840|M.avium_104 MGTNQRASIVMSDDEIADFVVKSRTGTLATIGRDGQPHLTAMWYAVVDGE Mflv_0791|M.gilvum_PYR-GCK MGKNERGKIVMTDDEIAEFIERSRTATMATVLPNGRPHLVAMWYAILDGE Mvan_0059|M.vanbaalenii_PYR-1 MGKNERAKIVMSDGEIAEFIERSRTATMATVLPNGRPHLVAMWYAVLDGE MSMEG_0048|M.smegmatis_MC2_155 MGKNERTKIVMSDEEIAEFVERSRTATMATVLPDGRPHLVAMWYAVVDGE TH_0229|M.thermoresistible__bu VGKNERAKIVMTDDEIAEFIERSRTATLATLLPDGRPHLVAMWYGVIDGD MAB_3296|M.abscessus_ATCC_1997 MGSNQRSQIVMSDEEITEFINNSRTTTMATVGADGQPHLVAMWYAVLNGE :*.::* .***:: **::*: *** *:**: :*:***.****.:::*: Mb3015|M.bovis_AF2122/97 IWLETKAKSQKAVNLRRDPRVSFLLEDGDTYDTLRGVSFEGVTEIVEE-P Rv2991|M.tuberculosis_H37Rv IWLETKAKSQKAVNLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEE-P MMAR_1720|M.marinum_M IWLETKAKSQKAVNLKRDPRVSFLLEDGNTYDTLRGVSFEGVAEIIDD-P MUL_1960|M.ulcerans_Agy99 IWLETKAKSQKAVNLKRDPRVSFLLEDGNTYDTLRGVSFEGVAEIIDD-P MAV_3840|M.avium_104 IWLETKAKSQKAINLKRDPRVSFLIEDGDTYDTLRGVSFEGVAELVDD-P Mflv_0791|M.gilvum_PYR-GCK IWFETKAKSQKAVNLRRDPTITVMIEDGLSYDTLRGVSIDGTAEIIDD-P Mvan_0059|M.vanbaalenii_PYR-1 IWFETKAKSQKAVNLRRDPTITVMIEDGLSYDTLRGVSIDGQAEIYDD-P MSMEG_0048|M.smegmatis_MC2_155 IWFETKAKSQKAVNLRRDPTVTVLIEDGHTYDTLRGVSIDGTAEIVDD-P TH_0229|M.thermoresistible__bu IWFETKAKSQKAVNLRRNPTLTVLIEDGHTYNTLRGVSIDGTAEIVDDDP MAB_3296|M.abscessus_ATCC_1997 VWFETKAKSQKVVNLKRNPTITCLIEDGLTYDTLRGVSIEGRAEIVED-P :*:********.:**:*:* :: ::*** :*:******::* :*: :: * Mb3015|M.bovis_AF2122/97 EALHRVGVSVWERYTGPYTDECKPMVDQMMNKRVGVRIVARRTRSWDHRK Rv2991|M.tuberculosis_H37Rv EALHRVGVSVWERYTGPYTDECKPMVDQMMNKRVGVRIVARRTRSWDHRK MMAR_1720|M.marinum_M EALHRVGVSVWERYTGPYTDDVKPMVDQMMNKRVGVRILSHRTRSWDHRK MUL_1960|M.ulcerans_Agy99 EALHRVGVSVWERYTGPYTDDVKPMVDQMMNKRVGVRILSHRTRSWDHRK MAV_3840|M.avium_104 DVAHRVGVSVFERYTGPYTDEMKPFVEQMMNKRVCVRIVARRARSWDHRK Mflv_0791|M.gilvum_PYR-GCK ETNLRVGISVWERYTGPYTEEMRPFVEQMMNNRISVRVIPSRTRSWDHRK Mvan_0059|M.vanbaalenii_PYR-1 ETSLRVGISVWERYTGPYTDEMRPFVDQMMNNRICVRVVPSRTRSWDHRK MSMEG_0048|M.smegmatis_MC2_155 ETLLRVGISVWERYTGPYTDEMRPFVDQMMNNRIAVRVVPGRTRSWDHRK TH_0229|M.thermoresistible__bu DMLLRVGISVWERYTGPYTEDMKPYVEQMMNKRIAVRVKASRYRSWDHRK MAB_3296|M.abscessus_ATCC_1997 DVLFQVGISVFERYTAPYTEEMKPFVEQMLNKRIAVRVRPTRVRSWDHRK : :**:**:****.***:: :* *:**:*:*: **: . * ******* Mb3015|M.bovis_AF2122/97 LGLPHMSVGGSTAP---------- Rv2991|M.tuberculosis_H37Rv LGLPHMSVGGSTAP---------- MMAR_1720|M.marinum_M LGLPPMPVGGSTAPAVLGTGRTDR MUL_1960|M.ulcerans_Agy99 LGLPPMPVGGSTAPAVLGTGRTDR MAV_3840|M.avium_104 LGLPPMPVGGSTAPAVLGTDR--- Mflv_0791|M.gilvum_PYR-GCK LGMQGMPISGSTAQYL-------- Mvan_0059|M.vanbaalenii_PYR-1 LGMQGMPISGSTAQYL-------- MSMEG_0048|M.smegmatis_MC2_155 LGMPAMPLGGSTAQYLNS------ TH_0229|M.thermoresistible__bu LGLPDMPVAGSTAKYLTDGA---- MAB_3296|M.abscessus_ATCC_1997 LGLPAMPLGGSTAPQQ-------- **: *.:.****