For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. avium 104 MAV_3840 (-)

annotation: pyridoxamine 5'-phosphate oxidase family protein
coordinates: 3967978 - 3968490
length: 170

MGTNQRASIVMSDDEIADFVVKSRTGTLATIGRDGQPHLTAMWYAVVDGEIWLETKAKSQKAINLKRDPR
VSFLIEDGDTYDTLRGVSFEGVAELVDDPDVAHRVGVSVFERYTGPYTDEMKPFVEQMMNKRVCVRIVAR
RARSWDHRKLGLPPMPVGGSTAPAVLGTDR

Operon Prediction Model: Genebank

Paralogs

species id gene e-value identity (len) annotation
M. avium 104 MAV_3840 - - 100% (170) pyridoxamine 5'-phosphate oxidase family protein
M. avium 104 MAV_1764 - 1e-08 33.02% (106) pyridoxamine 5'-phosphate oxidase family protein
M. avium 104 MAV_1292 - 5e-06 27.03% (111) pyridoxamine 5'-phosphate oxidase family protein

Closest Orthologs (e-value cutoff: 1e-4)

species id gene e-value identity (len) annotation
M. bovis AF2122 / 97 Mb3015 - 4e-78 84.05% (163) hypothetical protein Mb3015
M. gilvum PYR-GCK Mflv_0791 - 1e-64 65.43% (162) pyridoxamine 5'-phosphate oxidase-related, FMN-binding
M. tuberculosis H37Rv Rv2991 - 2e-78 84.66% (163) hypothetical protein Rv2991
M. leprae Br4923 MLBr_01508 - 6e-06 35.63% (87) hypothetical protein MLBr_01508
M. abscessus ATCC 19977 MAB_3296 - 3e-69 71.78% (163) hypothetical protein MAB_3296
M. marinum M MMAR_1720 - 7e-82 83.53% (170) hypothetical protein MMAR_1720
M. smegmatis MC2 155 MSMEG_0048 - 9e-69 72.22% (162) pyridoxamine 5'-phosphate oxidase family protein
M. thermoresistible (build 8) TH_0229 - 5e-66 69.94% (163) CONSERVED HYPOTHETICAL PROTEIN
M. ulcerans Agy99 MUL_1960 - 5e-82 83.53% (170) hypothetical protein MUL_1960
M. vanbaalenii PYR-1 Mvan_0059 - 9e-66 67.90% (162) pyridoxamine 5'-phosphate oxidase-related, FMN-binding

CLUSTAL 2.0.9 multiple sequence alignment


Mb3015|M.bovis_AF2122/97            ------MGTKQRADIVMS----EAEIADFVNSSRTGTLATIGPDGQPHLT
Rv2991|M.tuberculosis_H37Rv         ------MGTKQRADIVMS----EAEIADFVNSSRTGTLATIGPDGQPHLT
MMAR_1720|M.marinum_M               ------MGTKQRADIVMS----EAEIANFVTTSRTGTLATIGPNGQPHLT
MUL_1960|M.ulcerans_Agy99           ------MGTKQRADIVMS----EAEIANFVTTSRTGTLATIGPNGQPHLT
MAV_3840|M.avium_104                ------MGTNQRASIVMS----DDEIADFVVKSRTGTLATIGRDGQPHLT
Mflv_0791|M.gilvum_PYR-GCK          ------MGKNERGKIVMT----DDEIAEFIERSRTATMATVLPNGRPHLV
Mvan_0059|M.vanbaalenii_PYR-1       ------MGKNERAKIVMS----DGEIAEFIERSRTATMATVLPNGRPHLV
MSMEG_0048|M.smegmatis_MC2_155      ------MGKNERTKIVMS----DEEIAEFVERSRTATMATVLPDGRPHLV
TH_0229|M.thermoresistible__bu      ------VGKNERAKIVMT----DDEIAEFIERSRTATLATLLPDGRPHLV
MAB_3296|M.abscessus_ATCC_1997      ------MGSNQRSQIVMS----DEEITEFINNSRTTTMATVGADGQPHLV
MLBr_01508|M.leprae_Br4923          MRFGASLLRVRRRLYGMGSQVFDDKLLAVISGNSIGVLATIKRDGRPQLS
                                          :   .*    *     : ::  .:  .   .:**:  :*:*:* 

Mb3015|M.bovis_AF2122/97            AMWYAVIDGEIWLETKAKSQ--KAVNLRRDPRVSFLLE--DGDTYDTLRG
Rv2991|M.tuberculosis_H37Rv         AMWYAVIDGEIWLETKAKSQ--KAVNLRRDPRVSFLLE--DGDTYDTLRG
MMAR_1720|M.marinum_M               AMWYAVVDGEIWLETKAKSQ--KAVNLKRDPRVSFLLE--DGNTYDTLRG
MUL_1960|M.ulcerans_Agy99           AMWYAVVDGEIWLETKAKSQ--KAVNLKRDPRVSFLLE--DGNTYDTLRG
MAV_3840|M.avium_104                AMWYAVVDGEIWLETKAKSQ--KAINLKRDPRVSFLIE--DGDTYDTLRG
Mflv_0791|M.gilvum_PYR-GCK          AMWYAILDGEIWFETKAKSQ--KAVNLRRDPTITVMIE--DGLSYDTLRG
Mvan_0059|M.vanbaalenii_PYR-1       AMWYAVLDGEIWFETKAKSQ--KAVNLRRDPTITVMIE--DGLSYDTLRG
MSMEG_0048|M.smegmatis_MC2_155      AMWYAVVDGEIWFETKAKSQ--KAVNLRRDPTVTVLIE--DGHTYDTLRG
TH_0229|M.thermoresistible__bu      AMWYGVIDGDIWFETKAKSQ--KAVNLRRNPTLTVLIE--DGHTYNTLRG
MAB_3296|M.abscessus_ATCC_1997      AMWYAVLNGEVWFETKAKSQ--KVVNLKRNPTITCLIE--DGLTYDTLRG
MLBr_01508|M.leprae_Br4923          NVQYHFDPRDLAVRVSITEPGVKTRNLRRDPRASILVDVDDGWSYAVAEG
                                     : * .   :: .... ..   *. **:*:*  : :::  ** :* . .*

Mb3015|M.bovis_AF2122/97            VSFEGVTEIVEE-PEALHRVGVSVWERYTGPYTDECKPMVDQMMNKRVGV
Rv2991|M.tuberculosis_H37Rv         VSFEGVAEIVEE-PEALHRVGVSVWERYTGPYTDECKPMVDQMMNKRVGV
MMAR_1720|M.marinum_M               VSFEGVAEIIDD-PEALHRVGVSVWERYTGPYTDDVKPMVDQMMNKRVGV
MUL_1960|M.ulcerans_Agy99           VSFEGVAEIIDD-PEALHRVGVSVWERYTGPYTDDVKPMVDQMMNKRVGV
MAV_3840|M.avium_104                VSFEGVAELVDD-PDVAHRVGVSVFERYTGPYTDEMKPFVEQMMNKRVCV
Mflv_0791|M.gilvum_PYR-GCK          VSIDGTAEIIDD-PETNLRVGISVWERYTGPYTEEMRPFVEQMMNNRISV
Mvan_0059|M.vanbaalenii_PYR-1       VSIDGQAEIYDD-PETSLRVGISVWERYTGPYTDEMRPFVDQMMNNRICV
MSMEG_0048|M.smegmatis_MC2_155      VSIDGTAEIVDD-PETLLRVGISVWERYTGPYTDEMRPFVDQMMNNRIAV
TH_0229|M.thermoresistible__bu      VSIDGTAEIVDDDPDMLLRVGISVWERYTGPYTEDMKPYVEQMMNKRIAV
MAB_3296|M.abscessus_ATCC_1997      VSIEGRAEIVED-PDVLFQVGISVFERYTAPYTEEMKPFVEQMLNKRIAV
MLBr_01508|M.leprae_Br4923          TAELTPPAAAPD--DDTVEALIVLYRNIVGEHLD-WDEYRQAMVTDRRVL
                                    .:    .    :  :   .. : ::.. .. : :      : *:..*  :

Mb3015|M.bovis_AF2122/97            RIVARRTRSWDHRKLGLPHMSVGGSTAP----------
Rv2991|M.tuberculosis_H37Rv         RIVARRTRSWDHRKLGLPHMSVGGSTAP----------
MMAR_1720|M.marinum_M               RILSHRTRSWDHRKLGLPPMPVGGSTAPAVLGTGRTDR
MUL_1960|M.ulcerans_Agy99           RILSHRTRSWDHRKLGLPPMPVGGSTAPAVLGTGRTDR
MAV_3840|M.avium_104                RIVARRARSWDHRKLGLPPMPVGGSTAPAVLGTDR---
Mflv_0791|M.gilvum_PYR-GCK          RVIPSRTRSWDHRKLGMQGMPISGSTAQYL--------
Mvan_0059|M.vanbaalenii_PYR-1       RVVPSRTRSWDHRKLGMQGMPISGSTAQYL--------
MSMEG_0048|M.smegmatis_MC2_155      RVVPGRTRSWDHRKLGMPAMPLGGSTAQYLNS------
TH_0229|M.thermoresistible__bu      RVKASRYRSWDHRKLGLPDMPVAGSTAKYLTDGA----
MAB_3296|M.abscessus_ATCC_1997      RVRPTRVRSWDHRKLGLPAMPLGGSTAPQQ--------
MLBr_01508|M.leprae_Br4923          LTLP---------ILHVYGLPPGIR-------------
                                       .          * :  :. .

species	id	gene	e-value	identity (len)	annotation
M. avium 104	MAV_3840	-	-	100% (170)	pyridoxamine 5'-phosphate oxidase family protein
M. avium 104	MAV_1764	-	1e-08	33.02% (106)	pyridoxamine 5'-phosphate oxidase family protein
M. avium 104	MAV_1292	-	5e-06	27.03% (111)	pyridoxamine 5'-phosphate oxidase family protein