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VSELPRIETRDAWVEFPIFDAKSRSLKKAFLGKAGGSIGRNSSNVVVIEALRDITMSLEHGDRVGLVGHN GAGKSTLLRLLSGIYEPTRGLAKVTGRVAPVFDLGIGMDPEISGYENIIIRGLFLGQTRKQMLAKVDEIA EFTELGDYLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIGAVDAEFLKKAQSRLQSLVERSGILVF ASHSNEFLARLCKTAMWIDHGEIKLSGGIEDVVRAYEGEDAARHVRDVLAETQRDNIAQQPLAHKASGDE
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. marinum M | MMAR_5336 | rfbE | - | 100% (280) | O-antigen/lipopolysaccharide transport ATP- binding protein ABC transporter RfbE |
| M. marinum M | MMAR_3263 | - | 3e-16 | 28.86% (201) | ATP-binding protein ABC transporter |
| M. marinum M | MMAR_2476 | - | 7e-15 | 30.60% (232) | ABC transporter, ATP-binding protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3810 | rfbE | 1e-133 | 91.19% (261) | o-antigen/lipopolysaccharide transport ATP-binding protein |
| M. gilvum PYR-GCK | Mflv_1186 | - | 1e-131 | 88.93% (262) | ABC transporter related |
| M. tuberculosis H37Rv | Rv3781 | rfbE | 1e-133 | 91.19% (261) | o-antigen/lipopolysaccharide transport ATP-binding protein |
| M. leprae Br4923 | MLBr_00114 | - | 1e-135 | 88.85% (278) | putative ABC transporter ATP-binding component |
| M. abscessus ATCC 19977 | MAB_0203c | - | 1e-126 | 86.10% (259) | o-antigen/lipopolysaccharide transport ATP-binding protein ABC |
| M. avium 104 | MAV_0238 | - | 1e-132 | 91.86% (258) | O-antigen export system ATP-binding protein RfbB |
| M. smegmatis MC2 155 | MSMEG_6366 | - | 1e-136 | 92.05% (264) | O-antigen export system, ATP-binding protein |
| M. thermoresistible (build 8) | TH_1668 | - | 1e-133 | 89.73% (263) | PROBABLE O-ANTIGEN/LIPOPOLYSACCHARIDE TRANSPORT ATP-BINDING |
| M. ulcerans Agy99 | MUL_0092 | rfbE | 1e-155 | 98.93% (280) | O-antigen/lipopolysaccharide transport ATP- binding protein |
| M. vanbaalenii PYR-1 | Mvan_5618 | - | 1e-131 | 90.31% (258) | ABC transporter-related protein |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_1186|M.gilvum_PYR-GCK MTRPADEPFIETRNAWVEFPIFDAKTRSLKKAFLGKAGGAIGRNDSNVVV
Mvan_5618|M.vanbaalenii_PYR-1 MS--PDEPYIETRNAWVEFPIFDAKTRSLKKAFLGKAGGAIGRNESNVVV
MSMEG_6366|M.smegmatis_MC2_155 MTS-SSAPRIETRDAWVEFPIFDAKTRSLKKAFLGKAGGAIGRNQSNVVV
TH_1668|M.thermoresistible__bu ----VSHPSIETRNAWVEFPIFDAKSRSLKKAFLGKAGGAIGRNASNVVV
MMAR_5336|M.marinum_M -MSEL--PRIETRDAWVEFPIFDAKSRSLKKAFLGKAGGSIGRNSSNVVV
MUL_0092|M.ulcerans_Agy99 -MSEL--PRIETRDAWVEFPIFDAKSRSLKKAFLGKAGGSIGRNSSNVVV
Mb3810|M.bovis_AF2122/97 -MSDPHHPHIQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVV
Rv3781|M.tuberculosis_H37Rv -MSDPHHPHIQTHNAWVEFPIFDAKSRSLKKAVLGKAGGTIGRNNSNVVV
MLBr_00114|M.leprae_Br4923 -MVEG--PHIETNNAWVEFPIFDAKARSLKKAVLGKAGGTIGRNNSNVVV
MAV_0238|M.avium_104 ----------------MEFPIFDAKSRSLKKAFLGKAGGTIGRNNSNVVV
MAB_0203c|M.abscessus_ATCC_199 ------MVSIQTHQAWVEFPIFDAKSRSLKKAFLGKAGGAIGRNESNVVV
:********:******.******:**** *****
Mflv_1186|M.gilvum_PYR-GCK IEALRDITLSLKMGDRVGLVGHNGAGKSTLLRLLSGIYEPTRGVAEVRGR
Mvan_5618|M.vanbaalenii_PYR-1 IEALRDITMSLKMGDRVGLVGHNGAGKSTLLRLLSGIYEPTRGVATVRGR
MSMEG_6366|M.smegmatis_MC2_155 IEALRDITMSLEMGDRVGLVGHNGAGKSTLLRLLSGIYEPTRGSATVSGR
TH_1668|M.thermoresistible__bu IEALRDITMSLKLGDRVGLVGHNGAGKSTLLRLLSGIYEPTRGSAVVNGR
MMAR_5336|M.marinum_M IEALRDITMSLEHGDRVGLVGHNGAGKSTLLRLLSGIYEPTRGLAKVTGR
MUL_0092|M.ulcerans_Agy99 IEALRDITMSLEHGDRVGLVGHNGAGKSTLLRLLSGIYEPTRGLAKVTGR
Mb3810|M.bovis_AF2122/97 IEALRDITMELNLGDRVGLVGHNGAGKSTLLRLLSGIYEPTRGWAKVTGR
Rv3781|M.tuberculosis_H37Rv IEALRDITMELNLGDRVGLVGHNGAGKSTLLRLLSGIYEPTRGWAKVTGR
MLBr_00114|M.leprae_Br4923 IEALRDITMSLSVGDRVGLVGHNGAGKSTLLRLLSGIYEPTRGWAKVTGR
MAV_0238|M.avium_104 VEALRDITMSLELGDRVGLVGHNGAGKSTLLRLLSGIYEPTRGWAQVTGR
MAB_0203c|M.abscessus_ATCC_199 IEALRDITLSLKEGDRVGLVGHNGAGKSTLLRLLSGIYEPTRGSSYIKGR
:*******:.*. ****************************** : : **
Mflv_1186|M.gilvum_PYR-GCK VAPVFDLGVGMDPEISGFENIIIRGLFLGQTRKQMLAKVDEIAEFTELGD
Mvan_5618|M.vanbaalenii_PYR-1 VAPVFDLGVGMDPEISGFENIIIRGLFLGQTRKQMMSKVDEIAEFTELGD
MSMEG_6366|M.smegmatis_MC2_155 VAPVFDLGVGMDPEISGFENIIIRGLFLGQTRKQMLAKVDEIAEFTELGE
TH_1668|M.thermoresistible__bu VAPVFDLGVGMDPEISGFENIIIRGLFLGQTRKQMLAKIDEIAEFTELGE
MMAR_5336|M.marinum_M VAPVFDLGIGMDPEISGYENIIIRGLFLGQTRKQMLAKVDEIAEFTELGD
MUL_0092|M.ulcerans_Agy99 VAPVFDLGIGMDPEISGYENIIIRGLFLGQTRKQMLAKVDEIAEFTELGD
Mb3810|M.bovis_AF2122/97 VAPVFDLGIGMDPEISGYENIIIRGLFLGQTRKQMQAKVDEIAEFTELGE
Rv3781|M.tuberculosis_H37Rv VAPVFDLGIGMDPEISGYENIIIRGLFLGQTRKQMQAKVDEIAEFTELGE
MLBr_00114|M.leprae_Br4923 VAPVFDLGIGMDPEISGYENIIIRGLFLGQTRKQMLGKVDEIAEFTELGD
MAV_0238|M.avium_104 VAPIFDLGVGMDPEISGYENIIIRGLFLGQTRKQMLAKVDEIAEFTELGD
MAB_0203c|M.abscessus_ATCC_199 VAPVFDLGVGMDPEISGYENIIIRGMFLGQTRKQMQAKVDEIADFTELGE
***:****:********:*******:********* .*:****:*****:
Mflv_1186|M.gilvum_PYR-GCK YLNMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIGAVDAEFLKKAQTR
Mvan_5618|M.vanbaalenii_PYR-1 YLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIGAVDAEFLKKAQTR
MSMEG_6366|M.smegmatis_MC2_155 YLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIGAVDAEFLKKAQSR
TH_1668|M.thermoresistible__bu YLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIGAVDAEFLKKAQSR
MMAR_5336|M.marinum_M YLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIGAVDAEFLKKAQSR
MUL_0092|M.ulcerans_Agy99 YLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIGAVDAGFLKKAQSR
Mb3810|M.bovis_AF2122/97 YLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIGAVDADFLRKAQSR
Rv3781|M.tuberculosis_H37Rv YLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIGAVDADFLRKAQSR
MLBr_00114|M.leprae_Br4923 YLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIGSVDTDFLKKAQSR
MAV_0238|M.avium_104 YLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGLGAVDADFMKKAQSR
MAB_0203c|M.abscessus_ATCC_199 YLSMPLRTYSTGMRVRLAMGVVTSIDPEILLLDEGIGAVDAEFMKKARIR
**.********************************:*:**: *::**: *
Mflv_1186|M.gilvum_PYR-GCK LADLVARSGILVFASHSNEFLARLCDTAMWIDHGTIRMQGEIEDVVRAYE
Mvan_5618|M.vanbaalenii_PYR-1 LADLVERSGILVFASHSNEFLARLCNTAMWIDHGTIKMEGGIEEVVRGYE
MSMEG_6366|M.smegmatis_MC2_155 LQDLVERSGILVFASHSNEFLARLCKTAMWIDHGTIRMTGGIEEVVRAYE
TH_1668|M.thermoresistible__bu LQALVERSGILVFASHSNEFLARLCNTAMWIDHGTIKMTGSIEEVVRAYE
MMAR_5336|M.marinum_M LQSLVERSGILVFASHSNEFLARLCKTAMWIDHGEIKLSGGIEDVVRAYE
MUL_0092|M.ulcerans_Agy99 LQSLVERSGILVFASHSNEFLARLCKTAMWIDHGEIKLSGGIKDVVRAYE
Mb3810|M.bovis_AF2122/97 LQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEEVVRAYE
Rv3781|M.tuberculosis_H37Rv LQNLVERSGILVFASHSNEFLARLCKTAIWIDHGVIRLAGGIEEVVRAYE
MLBr_00114|M.leprae_Br4923 LQSLVERSGILVFASHSNEFLARLCKTAMWIDHGVIELSGGIEDVVRAYE
MAV_0238|M.avium_104 LQGLVERSGILVFASHSNEFLARLCKTAMWIDHGEIRMSGGIEDVVRAYE
MAB_0203c|M.abscessus_ATCC_199 LQQLVERSGMLVFASHSNEFLARLCNTAMWIDHGTIKMSGGIEDVVRAYE
* ** ***:***************.**:***** *.: * *::***.**
Mflv_1186|M.gilvum_PYR-GCK GEDAARHVREVLEENKRE-------NRSA----
Mvan_5618|M.vanbaalenii_PYR-1 GEDAARHVREVLEETAHT-------HEH-----
MSMEG_6366|M.smegmatis_MC2_155 GEDAARHVREVLEETARD-------AH------
TH_1668|M.thermoresistible__bu GEDAARHVREVIAETRGE-------SVGHD---
MMAR_5336|M.marinum_M GEDAARHVRDVLAETQRDNIAQQPLAHKASGDE
MUL_0092|M.ulcerans_Agy99 GEDAARHVRDVLAETQRDNVAQQPLAHKASGDE
Mb3810|M.bovis_AF2122/97 GEDAARHVREVLAETQAD-------RQNVQG--
Rv3781|M.tuberculosis_H37Rv GEDAARHVREVLAETQAD-------RQNVQG--
MLBr_00114|M.leprae_Br4923 GEDAARHVREVIAETAS--------AQNASGDE
MAV_0238|M.avium_104 GEDAARHVREVLAETAEQ-------P-------
MAB_0203c|M.abscessus_ATCC_199 GDEAGDHVAQILAEDAHDG--------------
*::*. ** ::: *