For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VRHKLLAAIYAVTIMAGAAGCSGGTQAPTPSVSKTTNSSPTTVASSIPDAAAGETKVTIGGQPQKVSGPV VCSTTNGKFSIAIGDMITGVIVGLEPDASVVHNAGLGTIDGVVIAFTEGVPSENANATKNGNTYQITGTA SGVDNTGQQIHKSFEIEVTCR
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. leprae Br4923 | MLBr_01966 | lpqH | - | 100% (161) | putative lipoprotein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3789 | lpqH | 2e-26 | 43.04% (158) | 19 kDa lipoprotein antigen precursor LPQH |
| M. gilvum PYR-GCK | Mflv_1226 | - | 2e-24 | 39.51% (162) | lipoprotein antigen family protein |
| M. tuberculosis H37Rv | Rv3763 | lpqH | 2e-26 | 43.04% (158) | 19 kDa lipoprotein antigen precursor LPQH |
| M. abscessus ATCC 19977 | MAB_2379 | - | 3e-25 | 42.00% (150) | lipoprotein LpqH precursor |
| M. marinum M | MMAR_5315 | lpqH | 7e-18 | 44.90% (98) | 19 kDa lipoprotein antigen precursor LpqH |
| M. avium 104 | MAV_0306 | - | 2e-28 | 43.83% (162) | lipoprotein LpqH |
| M. smegmatis MC2 155 | MSMEG_6316 | - | 1e-21 | 35.88% (170) | lipoprotein LpqH |
| M. thermoresistible (build 8) | TH_1652 | - | 1e-22 | 39.77% (171) | lipoprotein LpqH |
| M. ulcerans Agy99 | MUL_4389 | lpqH | 1e-25 | 39.51% (162) | 19 kDa lipoprotein antigen precursor LpqH |
| M. vanbaalenii PYR-1 | Mvan_5582 | - | 5e-24 | 41.72% (163) | hypothetical protein Mvan_5582 |
CLUSTAL 2.0.9 multiple sequence alignment
Mb3789|M.bovis_AF2122/97 MKR-GLTVAVAGAAILVAGLSGCSS--NKSTTGSGETTTAAG--------
Rv3763|M.tuberculosis_H37Rv MKR-GLTVAVAGAAILVAGLSGCSS--NKSTTGSGETTTAAG--------
MMAR_5315|M.marinum_M --------------------------------------------------
MUL_4389|M.ulcerans_Agy99 MKR-GPTVAVAGAAILVAGLSGCSS--NKSTTSGGESSSTGS--------
MAV_0306|M.avium_104 MKR-QLTIAVAGAAILAAGVSGCSSG-NKSAPSSSASSSSTS--------
Mflv_1226|M.gilvum_PYR-GCK MNR-HFVVALGGAALVIAGLSGCGGS-DKSETTG----------------
Mvan_5582|M.vanbaalenii_PYR-1 MKR-EILVAVGGAAIVMAGLSGCG-S-DKSETSG----------------
TH_1652|M.thermoresistible__bu MYR-GLLAAIGGAALVVAGLAGCSSN-DEGSTAADETTTGEAVDEVIVEE
MSMEG_6316|M.smegmatis_MC2_155 MKR-GFLVAVGSAALVVAGLSGCSSD-DKSAEASEASPTANATVDSTASP
MAB_2379|M.abscessus_ATCC_1997 MQRTGSVVVIGAGAIIALGLAGCSGDGNESAPSSAEKTTVS---------
MLBr_01966|M.leprae_Br4923 MRH-KLLAAIY-AVTIMAGAAGCSGGTQAPTPSVSKTTNSSP--------
Mb3789|M.bovis_AF2122/97 -----TTASPG--AASGPKVVIDGKDQNVTGSVVCTTAAGNVNIAIGGAA
Rv3763|M.tuberculosis_H37Rv -----TTASPG--AASGPKVVIDGKDQNVTGSVVCTTAAGNVNIAIGGAA
MMAR_5315|M.marinum_M ----------------------------MTGSVVCTTAAGNVNIAIGGAA
MUL_4389|M.ulcerans_Agy99 -----TSASTGGGQASGTKVLIDGQDQHVTGSVVCTTAAGNVNIAIGGAA
MAV_0306|M.avium_104 -----ASASSG--GAAGTKVIIDGKDQNVSGSVVCTNAGGTVNIAIGGAA
Mflv_1226|M.gilvum_PYR-GCK ------ETSSAAAAEGKSTVTIDGADQEVTGTVVCSDMGGNTNIAIGDAT
Mvan_5582|M.vanbaalenii_PYR-1 ------ETSQAAAAEGKSTVTIDGADQEVQGTVVCSDMGGNTNIAIGDAT
TH_1652|M.thermoresistible__bu ---EEETTTTGAAAEGAATVSIDGQEQEIQGTVACTQTGDTVMIAIGDAT
MSMEG_6316|M.smegmatis_MC2_155 GTSVAAGDATATTGTGTARVVIDGAEHPIEGSVVCATVAGNVSVTVGQGT
MAB_2379|M.abscessus_ATCC_1997 ------AEGGAAAMNSSAKVVVDGKEKKVEGAIACSTAAGQVNIGMGAGM
MLBr_01966|M.leprae_Br4923 ---TTVASSIPDAAAGETKVTIGGQPQKVSGPVVCSTTNGKFSIAIGDMI
: *.:.*: . : :*
Mb3789|M.bovis_AF2122/97 TGIAAVLTDGNPPEVKSVGLGNVNGVTLGYTSGTGQGNASATKDGSHYKI
Rv3763|M.tuberculosis_H37Rv TGIAAVLTDGNPPEVKSVGLGNVNGVTLGYTSGTGQGNASATKDGSHYKI
MMAR_5315|M.marinum_M TGIAAVLTDANPPEVKSVGLGNVNGVTLGYTSGTGQGNASATKDGSSYKI
MUL_4389|M.ulcerans_Agy99 TGIAAVLTDANPPEVKSVGLGNVNGVTLGYTSGTGQGNASATKDGSSYKI
MAV_0306|M.avium_104 TGIAAVLSDGNPPQVKSVGLGNVNGVTLGYTSGTGQGNASAEKNGNSYKI
Mflv_1226|M.gilvum_PYR-GCK TGIGAVVSTGDEPTLVSVGLGNVNGVTLGYQSGTGSNDGKVEKDDKTYKI
Mvan_5582|M.vanbaalenii_PYR-1 TGIGVVVSTGDDPAVVSVGLGNVNGVTLGYQSGAGQGEAKAEKDGKTYKI
TH_1652|M.thermoresistible__bu QGISATVSTGDEPQVSQVALGNVDGVALTYQEGTGQGEAAAEKDGDTYKI
MSMEG_6316|M.smegmatis_MC2_155 SAVTATLSEGDQPAVSAVALGNIDGVSLGYTPGVPGGSAEATKDGNKYTI
MAB_2379|M.abscessus_ATCC_1997 QAIAVVLSDGDSPKVTSVGLGNIDGVTLGFADGAPGGKATATKDGKKYTV
MLBr_01966|M.leprae_Br4923 TGVIVGLEP-DASVVHNAGLGTIDGVVIAFTEGVPSENANATKNGNTYQI
.: . : : . : ..**.::** : : *. .. . *:.. * :
Mb3789|M.bovis_AF2122/97 TGTATGVDMANP-MSPVNKSFEIEVTCS--
Rv3763|M.tuberculosis_H37Rv TGTATGVDMANP-MSPVNKSFEIEVTCS--
MMAR_5315|M.marinum_M SGTATGVDMANP-MSPVNKPFEINVTCP--
MUL_4389|M.ulcerans_Agy99 SGTATGVDMANP-MSPVNKPFEINVTCP--
MAV_0306|M.avium_104 TGTATGVDMANP-LQPVNKPFEIDVTCNS-
Mflv_1226|M.gilvum_PYR-GCK SGTATGVDMANP-MQPVNKPFEIEVTCP--
Mvan_5582|M.vanbaalenii_PYR-1 SGTATGVDMANP-MAPVNKPFEIEVTCP--
TH_1652|M.thermoresistible__bu TGTATGADIADPGAGMVSKPFEIEVTCPGS
MSMEG_6316|M.smegmatis_MC2_155 KGSATGADMANPMAGAVTKPFELEITCP--
MAB_2379|M.abscessus_ATCC_1997 TGTATGVDTANP-MQPIEKPFEIEVTCP--
MLBr_01966|M.leprae_Br4923 TGTASGVDNTGQ---QIHKSFEIEVTCR--
.*:*:*.* :. : *.**:::**