For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. marinum M MMAR_4998 (-)

annotation: hypothetical protein MMAR_4998
coordinates: 6067084 - 6067914
length: 276

TIDAWMQHPTQRFLRSDMLASLRRWTDSSIPEAQIPIEATIASMDAADVEFGLLSAWRGPNGQDLVSNDE
VAGWVDLHPQRFAGLAAVDLDRPMVAVRELRSRIASGFVGLRVVPWLWEAPPTDRRYYPLFAECVESGVP
FCTQVGHTGPLRPSETGRPIPYIDQVALDFPELVIVCGHVGYPWTEEMVAVARKHENVYIDTSAYTIKRL
PHELIRFMKTGTGRRKVMFGTNFPMIAHAHALAGLDELGLEDEARRDFLHGNAERVFGLAQRPPR*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. marinum MMMAR_4998--100% (276)hypothetical protein MMAR_4998
M. marinum MMMAR_4012-8e-2532.16% (199) metal-dependent hydrolase
M. marinum MMMAR_0140-2e-2129.75% (242) hypothetical protein MMAR_0140

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb3540c-1e-13884.62% (273) hypothetical protein Mb3540c
M. gilvum PYR-GCKMflv_4348-5e-2735.57% (194) amidohydrolase 2
M. tuberculosis H37RvRv3510c-1e-13884.62% (273) hypothetical protein Rv3510c
M. leprae Br4923-----
M. abscessus ATCC 19977MAB_4667-7e-1227.68% (177) putative amidohydrolase
M. avium 104MAV_0646-1e-13987.08% (271) amidohydrolase family protein
M. smegmatis MC2 155MSMEG_2232-2e-2832.11% (246) amidohydrolase family protein
M. thermoresistible (build 8)TH_1218-2e-2735.18% (199) amidohydrolase family protein
M. ulcerans Agy99MUL_3876-1e-2432.16% (199) metal-dependent hydrolase
M. vanbaalenii PYR-1Mvan_1996-1e-2634.63% (205) amidohydrolase 2

CLUSTAL 2.0.9 multiple sequence alignment


Mb3540c|M.bovis_AF2122/97           -----------MTIDVWMQHPTQRFLHGDMFASLRR---WTGGSIPETDI
Rv3510c|M.tuberculosis_H37Rv        -----------MTIDVWMQHPTQRFLHGDMFASLRR---WTGGSIPETDI
MAV_0646|M.avium_104                -----------MTIDVWMQHPTVRFLRSDMLASLRR---WTGGSIPDTDI
MMAR_4998|M.marinum_M               -----------MTIDAWMQHPTQRFLRSDMLASLRR---WTDSSIPEAQI
TH_1218|M.thermoresistible__bu      ----MTR----KVLDCLVNVHFGEAEMQPAWMEKVRDDYFKGPEAMFAPV
MUL_3876|M.ulcerans_Agy99           ----MTD----RAIDCLVNVHFGEAEAQPNWMLKVRDDYFKGPDSMFAPV
Mflv_4348|M.gilvum_PYR-GCK          ----MSD----RVIDCLVNVHFGETANQPEFMLKVRDDYFKGPQSLYDQV
Mvan_1996|M.vanbaalenii_PYR-1       ----MTH----KVIDCLVNVHFGETAKQPEFMLKVRDDYFKGPQSLYEQV
MSMEG_2232|M.smegmatis_MC2_155      ----MTESPAGRAIDCLANVHFGETQNQPAFMTKVRDDYFKGPKSMYDPI
MAB_4667|M.abscessus_ATCC_1997      MSESAFDPAPVRQIWQELGIPGIVDVHTHFMPKSVMDKVWAYFDSAGPLV
                                                 :                         :   .     :

Mb3540c|M.bovis_AF2122/97           PIEATVSSMDAGGVTLGLLSAW--RGPNGQDLISNDAVAEWVRLYPNRFA
Rv3510c|M.tuberculosis_H37Rv        PIEATVSSMDAGGVTLGLLSAW--RGPNGQDLISNDAVAEWVRLYPNRFA
MAV_0646|M.avium_104                PIEATLASMDAAGVGYGLLSAW--RGPNGQDLVSNDEVAQWVAAHPNRFA
MMAR_4998|M.marinum_M               PIEATIASMDAADVEFGLLSAW--RGPNGQDLVSNDEVAGWVDLHPQRFA
TH_1218|M.thermoresistible__bu      DLAELLDEMDEQGVQKAILMDN--LSK------PSVTARKFVEARPDRFA
MUL_3876|M.ulcerans_Agy99           DLAQLLDEMDEQGVQRAILMDS--LAS------PSLTACKFVQAKPDRFA
Mflv_4348|M.gilvum_PYR-GCK          ELPALLDEMAEHGVEKAILMDN--LVK------PSVTARKFAEERPDKFA
Mvan_1996|M.vanbaalenii_PYR-1       ELPALLDEMAEHGVEKAILMDN--LVK------PSVTARKFVEERPDKFA
MSMEG_2232|M.smegmatis_MC2_155      DLGALLEEMDANGVERAILMDN--LTK------PSVTARKFVEAHPERFA
MAB_4667|M.abscessus_ATCC_1997      GRPWPITYRADESQRVTTLRDFGVLRFTSLVYPHKPQMAAWLNQWAAQFA
                                         :      .     *               .     :    . :**

Mb3540c|M.bovis_AF2122/97           G-LAAVDLDRPMAAVRELRRRVGEG-FVGLRVVPWLWG---APPTDRRYY
Rv3510c|M.tuberculosis_H37Rv        G-LAAVDLDRPMAAVRELRRRVGEG-FVGLRVVPWLWG---APPTDRRYY
MAV_0646|M.avium_104                G-LAAVDLDRPMEAVRELRCRIADGGFVGLRVVPWLWN---APPTDRRYY
MMAR_4998|M.marinum_M               G-LAAVDLDRPMVAVRELRSRIASG-FVGLRVVPWLWE---APPTDRRYY
TH_1218|M.thermoresistible__bu      LAMGGVNLLRPIPSLRELAAVAADLPVVYAVVGPSFWGDGQYPPSDAVYY
MUL_3876|M.ulcerans_Agy99           LAMGGINLLRPVRPLRELTAIVGELPVAYAAVGPSFWGEGQYPPSDAVYY
Mflv_4348|M.gilvum_PYR-GCK          LAIGGVNLLRPMPSLRELSSVVADLPVAYAAVGPSFWGDGMYPPSDAVYY
Mvan_1996|M.vanbaalenii_PYR-1       LAVGGVNLLRPMPSLRELAAVVADLPVAYAAVGPSFWGDGMYPPSDAVYY
MSMEG_2232|M.smegmatis_MC2_155      LAMGGVNLLRPIPSLRELAAAVRDLPVAYAVVGPSFWGDGQYPPSDAVYY
MAB_4667|M.abscessus_ATCC_1997      AQTPDCIHTATFFPEPGAADYVREAIDAGVGVFKVHVQVGAFSPTDPLLV
                                              .. .         .   .   *          .*:*    

Mb3540c|M.bovis_AF2122/97           PLFAECVQSAVPFCTQVGHTGPLRPSETGRPIPYIDQVALDFPELVIVCG
Rv3510c|M.tuberculosis_H37Rv        PLFAECVQSAVPFCTQVGHTGPLRPSETGRPIPYIDQVALDFPELVIVCG
MAV_0646|M.avium_104                PLFAACVEAGVPFCTQVGHTGPLRPSETGRPIPYIDQVALDFPELVIVCG
MMAR_4998|M.marinum_M               PLFAECVESGVPFCTQVGHTGPLRPSETGRPIPYIDQVALDFPELVIVCG
TH_1218|M.thermoresistible__bu      PLYTKCAELELPLCVNTGIPGPPIPGEVQNPI-HLDRVCVRFPELRLCMI
MUL_3876|M.ulcerans_Agy99           PLYVKCAELELALCINTGIPGPPIPGEVQHPM-HLDRVCVRFPELRLCMI
Mflv_4348|M.gilvum_PYR-GCK          PLYTKCAELGLPLCINTGLPGPPIPGEVQNPI-HLDRVCVRFPELKLCMI
Mvan_1996|M.vanbaalenii_PYR-1       PLYTKCAELELPLCINTGLPGPPIPGEVQNPI-HLDRVCVRFPELKLCMI
MSMEG_2232|M.smegmatis_MC2_155      PLYTKCAELDLPLCVNTGLPGPPIPGEVQNPI-HLDRVCVRFPELRLCMI
MAB_4667|M.abscessus_ATCC_1997      PVWGLIEDAGVPVVIHCGS-GP-APGEFTGPD-PVTALLKQFPHLRLIVA
                                    *::    :  :..  : *  **  *.*   *   :  :   **.* :   

Mb3540c|M.bovis_AF2122/97           HVGYPWTEEMVAVARKHENVYIDT----SAYTIKRLPGKLVRFMKTDTGQ
Rv3510c|M.tuberculosis_H37Rv        HVGYPWTEEMVAVARKHENVYIDT----SAYTIKRLPGKLVRFMKTDTGQ
MAV_0646|M.avium_104                HVGYPWTEEMVAVARKHENVYIDT----SAYTIERLPDELVRFIKTGTGQ
MMAR_4998|M.marinum_M               HVGYPWTEEMVAVARKHENVYIDT----SAYTIKRLPHELIRFMKTGTGR
TH_1218|M.thermoresistible__bu      HGADPWWDIAIRLLIKYQNLRLMT----SAWSPKRLPNSLLHYMRT-RGP
MUL_3876|M.ulcerans_Agy99           HGADPWWDVAIRLLLKYSNSRLMT----SAWTPKRLPESLLHYMRT-RGK
Mflv_4348|M.gilvum_PYR-GCK          HGADPWWDVAIRLLIKYANLRIMT----SAWSPKRLPDSLLHYMRT-RGK
Mvan_1996|M.vanbaalenii_PYR-1       HGADPWWDVAIRLLIKYANLRIMT----SAWSPKRLPDSLLHFMRT-RGK
MSMEG_2232|M.smegmatis_MC2_155      HGADPWWDIAIRMLIKYKNLRLMT----SAWSPKRLPESLLHYMRT-RGP
MAB_4667|M.abscessus_ATCC_1997      HMGMPEYSEFLDLCEQHDEVRLDTTMAFTAFSNEKAPFPESDYPRLVEMG
                                    * . *  .  : :  :: :  : *    :*:: :: *     : :     

Mb3540c|M.bovis_AF2122/97           RKVLFGTNYPMIAH--THALTGLDELG-LSDEARRDFLHGNAVRVFKLDP
Rv3510c|M.tuberculosis_H37Rv        RKVLFGTNYPMIAH--THALTGLDELG-LSDEARRDFLHGNAVRVFKLDP
MAV_0646|M.avium_104                RKVLFGTNYPMITA--EHALAGLDGLG-LSDEARRDFLHGNAERVFRLEA
MMAR_4998|M.marinum_M               RKVMFGTNFPMIAH--AHALAGLDELG-LEDEARRDFLHGNAERVFGLAQ
TH_1218|M.thermoresistible__bu      NKVIFGSDWPVLTM--RRVVPEAYALD-LPSEVLDNYLYNNAAEFFFGGP
MUL_3876|M.ulcerans_Agy99           NKVIFASDWPVLRM--RRVVPEARALD-LPADVLANYLYNNAQEFFFG-E
Mflv_4348|M.gilvum_PYR-GCK          NKVIFASDWPVLRQ--SRVVPEALALD-LPPDVLDNYLYNNANDFFFGTD
Mvan_1996|M.vanbaalenii_PYR-1       NKVIFASDWPVLRQ--SRVVPEAVALD-LPPDVLDNYLYNNANDFFFGAA
MSMEG_2232|M.smegmatis_MC2_155      DKIIFASDFPVLRM--NRVVPEARALD-LPPDVLDNYLYHNAAEFFFGGR
MAB_4667|M.abscessus_ATCC_1997      HKIYFGSDFPNIPYGYAEAITALRRMPGIDDAWMRDVLYHNGARLFGVDT
                                     *: *.:::* :     ..:.    :  :      : *: *.  .*    

Mb3540c|M.bovis_AF2122/97           RGKVQT
Rv3510c|M.tuberculosis_H37Rv        RGKVQT
MAV_0646|M.avium_104                AT----
MMAR_4998|M.marinum_M               RPPR--
TH_1218|M.thermoresistible__bu      EQER--
MUL_3876|M.ulcerans_Agy99           ESGR--
Mflv_4348|M.gilvum_PYR-GCK          EQEI--
Mvan_1996|M.vanbaalenii_PYR-1       EQEI--
MSMEG_2232|M.smegmatis_MC2_155      QPQEF-
MAB_4667|M.abscessus_ATCC_1997      SASGR-