For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
ADRAKGHSTRYSAYTGGPDPLAPPVDLREALEQIGQDVMAGTSPRRALSELLRRGTKSMPGADRLASEAN RRRRELLRRNNLDGTLQEIKKLLDEAVLAERKELARALDDDARFSELQLEALPPSPAKAVQELSEYDWRS GEAREKYDQIKDLLGRELLDQRFAGMKQALEGATDEDRERVNEMLDDLNNLLDKHARGQDTQQDFQDFMD KHGEFFPENPSNVEELLDSLAKRAAAAQRFRNSLSQEQRDELDALAQQAFGSPSLMQALNRLDAHLQEAR PGEDWTGQQQFSGDNPFGMGEGTQALADIAELEQLAEQLSQAYPGATMDDVDLDALARQLGDQAAIDART LAELERALVNQGFFDRGSDGQWRLSPKAMRRLGETALRDVVQQLSGRRGERDHRRAGAAGELTGATRPWQ FGDTEPWHISRTLTNAVLRQAGTAPSGGGAGPIRITVDDVEVSETETRTQAAVALLVDTSFSMVMENRWL PMKRTALALNHLVCTRFRSDALQIIAFGRYARTVTAAELTGLEGVYEQGTNLHHALALAGRHLRRHPNAQ PVVLVVTDGEPTAHLEDFAGEGAGSTVFFDYPPHPRTIAHTVRGFDDMARLGAQITIFRLGSDRGLARFI DQVARRVEGRVVEPDLDGLGAAVVGDYLRSRRRR*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_4540 | - | - | 100% (665) | hypothetical protein MMAR_4540 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0984 | - | 0.0 | 89.24% (660) | hypothetical protein Mb0984 |
M. gilvum PYR-GCK | Mflv_1878 | - | 0.0 | 86.15% (657) | von Willebrand factor, type A |
M. tuberculosis H37Rv | Rv0959 | - | 0.0 | 89.24% (660) | hypothetical protein Rv0959 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. avium 104 | MAV_1084 | - | 0.0 | 92.50% (640) | von Willebrand factor, type A |
M. smegmatis MC2 155 | MSMEG_5511 | - | 0.0 | 86.86% (662) | von Willebrand factor, type A |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_4710 | - | 0.0 | 98.95% (665) | hypothetical protein MUL_4710 |
M. vanbaalenii PYR-1 | Mvan_4853 | - | 0.0 | 86.10% (662) | von Willebrand factor, type A |
CLUSTAL 2.0.9 multiple sequence alignment Mb0984|M.bovis_AF2122/97 MAKSDGDDPLRPASPRLRSSRRHSLRYSAYTGGPDPLAPPVDLRDALEQI Rv0959|M.tuberculosis_H37Rv MAKSDGDDPLRPASPRLRSSRRHSLRYSAYTGGPDPLAPPVDLRDALEQI MMAR_4540|M.marinum_M ---------------MADRAKGHSTRYSAYTGGPDPLAPPVDLREALEQI MUL_4710|M.ulcerans_Agy99 ---------------MADRAKGHSTRYSAYTGGPDPLAPPVDLREALEQI MAV_1084|M.avium_104 ----------------------------------------MDLREALEQI Mflv_1878|M.gilvum_PYR-GCK --------------------MSRTSRYSRYTGGPDPLAPPVDLRDALEAI Mvan_4853|M.vanbaalenii_PYR-1 -----------MAK------HVRLSRYSRYTGGPDPLAPPVDLREALEAI MSMEG_5511|M.smegmatis_MC2_155 -----------MADNASGRGHGHTSRYSRYTGGPDPLAPPIDLREALEQI :***:*** * Mb0984|M.bovis_AF2122/97 GQDVMAGASPRRALSELLRRGTRNLTGADRLAAEVNRRRRELLRRNNLDG Rv0959|M.tuberculosis_H37Rv GQDVMAGASPRRALSELLRRGTRNLTGADRLAAEVNRRRRELLRRNNLDG MMAR_4540|M.marinum_M GQDVMAGTSPRRALSELLRRGTKSMPGADRLASEANRRRRELLRRNNLDG MUL_4710|M.ulcerans_Agy99 GQDVMAGTSPRRALSELLRRGTKSMPGADRLASEANRRRRELLRRNNLDG MAV_1084|M.avium_104 GQDVMAGTSPRRALSELLRRGTKNMPGADRLAAEANRRRRELLRRNNLDG Mflv_1878|M.gilvum_PYR-GCK GQDVMEGTSPRRALSELLRRGTKNMPGADKLAAEANRRRRELLQRNNLDG Mvan_4853|M.vanbaalenii_PYR-1 GQDVMEGTSPRRALSEMLRRGTQNMPGADKLAAEANRRRRELLQRNNLDG MSMEG_5511|M.smegmatis_MC2_155 GQNVMEGSSPRRALSELMRRGTQNMRGADRLAAEANRRRRELLQRNNLDG **:** *:********::****:.: ***:**:*.********:****** Mb0984|M.bovis_AF2122/97 TLQEIKKLLDEAVLAERKELARALDDDARFAELQLDALPASPAKAVQELA Rv0959|M.tuberculosis_H37Rv TLQEIKKLLDEAVLAERKELARALDDDARFAELQLDALPASPAKAVQELA MMAR_4540|M.marinum_M TLQEIKKLLDEAVLAERKELARALDDDARFSELQLEALPPSPAKAVQELS MUL_4710|M.ulcerans_Agy99 TLQEIKKLLDEAVLAERKELARALDDDARFSELQLEALPPSPAKAVQELS MAV_1084|M.avium_104 TLQEIKKLLDEAVLAERKELARALDDDARFGELQLDALPASPAKAVQELS Mflv_1878|M.gilvum_PYR-GCK TLTEIKKLLDEAVLAERKELARALDDDARFGELQLESLSPSPAKAVQELA Mvan_4853|M.vanbaalenii_PYR-1 TLADIKKLLDEAVLAERKELARALDDDARFGELQLNSLSPSPAKAVQELS MSMEG_5511|M.smegmatis_MC2_155 TLQEIKKLLDEAVLAERKELARALDDDARFGELQLDALSPSPAKAVQELA ** :**************************.****::*..*********: Mb0984|M.bovis_AF2122/97 EYRWRSGQAREKYEQIKDLLGRELLDQRFAGMKQALAGATDDDRRRVTEM Rv0959|M.tuberculosis_H37Rv EYRWRSGQAREKYEQIKDLLGRELLDQRFAGMKQALAGATDDDRRRVTEM MMAR_4540|M.marinum_M EYDWRSGEAREKYDQIKDLLGRELLDQRFAGMKQALEGATDEDRERVNEM MUL_4710|M.ulcerans_Agy99 EYDWRSGEAREKYDQIKDLLGRELLDQRFAGMKQALEGATDEDRQRVNEM MAV_1084|M.avium_104 EYNWRSSEAREKYDQIKDLLGREMLDQRFAGMKQALQGATDEDRQRVSDM Mflv_1878|M.gilvum_PYR-GCK EYDWRSAEAREKYDQIKDLMGREMLDQRFAGMKEALENATDEDRQRVNDM Mvan_4853|M.vanbaalenii_PYR-1 DYDWRSPEAREKYDQIKDLLGREMLDQRFAGMKEALENATDEDRQRVNDM MSMEG_5511|M.smegmatis_MC2_155 EYDWRSQEAREKYEQIKDLMGREMLDQRFAGMKQALENATDEDRQRVNDM :* *** :*****:*****:***:*********:** .***:**.**.:* Mb0984|M.bovis_AF2122/97 LDDLNDLLDKHARGEDTQRDFDEFMTKHGEFFPENPRNVEELLDSLAKRA Rv0959|M.tuberculosis_H37Rv LDDLNDLLDKHARGEDTQRDFDEFMTKHGEFFPENPRNVEELLDSLAKRA MMAR_4540|M.marinum_M LDDLNNLLDKHARGQDTQQDFQDFMDKHGEFFPENPSNVEELLDSLAKRA MUL_4710|M.ulcerans_Agy99 LDDLNNLLDKHARGQDTQQDFQDFMDKHGEFFPENPSNVEELLDSLAKRA MAV_1084|M.avium_104 LNDLNDLLDKHAKGQDSQQDFDDFMAKHGEFFPESPRNVEELLDSLAKRA Mflv_1878|M.gilvum_PYR-GCK LDDLNELLDKHARGEDTDQGFRDFMAKHGEFFPENPQNIDELLDSLAQRA Mvan_4853|M.vanbaalenii_PYR-1 LDDLNDLLDKHAKGQDSPQDFQDFMAKHGQFFPENPKNIDELLDSLAKRA MSMEG_5511|M.smegmatis_MC2_155 LDDLNNLLDKHAAGQDTQQDFQDFMDKHGEFFPENPQNIDELLDSLAKRA *:***:****** *:*: :.* :** ***:****.* *::*******:** Mb0984|M.bovis_AF2122/97 AAAQRFRNSLSQEQRDELDALAQQAFGSPALMRALDRLDAHLQAARPGED Rv0959|M.tuberculosis_H37Rv AAAQRFRNSLSQEQRDELDALAQQAFGSPALMRALDRLDAHLQAARPGED MMAR_4540|M.marinum_M AAAQRFRNSLSQEQRDELDALAQQAFGSPSLMQALNRLDAHLQEARPGED MUL_4710|M.ulcerans_Agy99 AAAQRFRNSLSQEQRDELDALAQQAFGSPSLMQALNRLDAHLQEARPGED MAV_1084|M.avium_104 AAAQRFRNSLSAEQRAELDALAQQAFGSPDLMQALNRLDAHLQAARPGED Mflv_1878|M.gilvum_PYR-GCK AAAQRFRNSLTEQQRAELDSLAQQAFGSPSLMNALNRLDSHLQAARPGED Mvan_4853|M.vanbaalenii_PYR-1 AAAQRFRNSLSEQQRAELDALAQQAFGSPSLMNALDRLDAHLQSARPGED MSMEG_5511|M.smegmatis_MC2_155 AAAQRFRNSLSPDQRAELDALAQQAFGSPSLMNALNRLDAHLQSARPGED **********: :** ***:********* **.**:***:*** ****** Mb0984|M.bovis_AF2122/97 WTGSQQFSGDNPFGMGEGTQALADIAELEQLAEQLSQSYPGASMDDVDLD Rv0959|M.tuberculosis_H37Rv WTGSQQFSGDNPFGMGEGTQALADIAELEQLAEQLSQSYPGASMDDVDLD MMAR_4540|M.marinum_M WTGQQQFSGDNPFGMGEGTQALADIAELEQLAEQLSQAYPGATMDDVDLD MUL_4710|M.ulcerans_Agy99 WTGQQRFSGDNPFGMGEGTQALADIAELEQLAEQLSQAYPGATMDDVDLD MAV_1084|M.avium_104 WGGSEQFSGDNPFGMGEGTQALADIAELEQLAEQLSQSYPGATMDDVDLD Mflv_1878|M.gilvum_PYR-GCK WSGSQRFSGDDPLGMGEGAQALADIAELEQLAEQLSQSYSGASMDDVDLD Mvan_4853|M.vanbaalenii_PYR-1 WTGSQRFSGDDPLGMGEGAQALADIAELEQLAEQLSQSYSGATMDDVDLD MSMEG_5511|M.smegmatis_MC2_155 WNGAQRFSGDDPLGMGEGAQALADIAELEQLADALSQSYAGATMDDVDLE * * ::****:*:*****:*************: ***:*.**:******: Mb0984|M.bovis_AF2122/97 ALARQLGDQAAVDARTLAELERALVNQGFLDRGSDGQWRLSPKAMRRLGE Rv0959|M.tuberculosis_H37Rv ALARQLGDQAAVDARTLAELERALVNQGFLDRGSDGQWRLSPKAMRRLGE MMAR_4540|M.marinum_M ALARQLGDQAAIDARTLAELERALVNQGFFDRGSDGQWRLSPKAMRRLGE MUL_4710|M.ulcerans_Agy99 ALARQLGDQAAIDARTLAELERALVNQGFFDRGSDGQWRLSPKAMRRLGE MAV_1084|M.avium_104 ALARQLGDQAAVDARTLAELERALVNQGFLDRGSDGQWRLSPKAMRRLGE Mflv_1878|M.gilvum_PYR-GCK MLARQLGDEAAVDARTLSELERALMNQGFLDRGSDGQWRLSPKAMRQLGQ Mvan_4853|M.vanbaalenii_PYR-1 MLARQLGDEAAVNARTLAELERALMNQGFLDRGSDGQWRLSPKAMRQLGQ MSMEG_5511|M.smegmatis_MC2_155 ALARQLGDEAAVDARTLAELERALVNQGFLDRGSDGQWRLSPKAMRQLGQ *******:**::****:******:****:****************:**: Mb0984|M.bovis_AF2122/97 TALRDVAQQLSGRHGERDHRRAGAAGELTGATRPWQFGDTEPWHVARTLT Rv0959|M.tuberculosis_H37Rv TALRDVAQQLSGRHGERDHRRAGAAGELTGATRPWQFGDTEPWHVARTLT MMAR_4540|M.marinum_M TALRDVVQQLSGRRGERDHRRAGAAGELTGATRPWQFGDTEPWHISRTLT MUL_4710|M.ulcerans_Agy99 TALRDVVQQLSGRRGERDHRRAGAAGELTGATRPWQFGDTEPWHISRTLT MAV_1084|M.avium_104 TALRDVAQQLSGRRGERDHRRAGAAGELTGATRPWQFGDTEPWNISRTLT Mflv_1878|M.gilvum_PYR-GCK AALRDVAQQLSGRHGERDTRRAGAAGELTGATRPWQFGDTEPWNVTRTLT Mvan_4853|M.vanbaalenii_PYR-1 AALRDVAQQLSGRHGERDTRRAGAAGELTGATRPWQFGDTEPWNVTRTVT MSMEG_5511|M.smegmatis_MC2_155 TALRDVAQQLSGRHGERDTRRAGAAGELTGATRPWQFGDTEPWNVTRTVT :*****.******:**** ************************:::**:* Mb0984|M.bovis_AF2122/97 NAVLRQAAAVH-----------DRIRITVEDVEVAETETRTQAAVALLVD Rv0959|M.tuberculosis_H37Rv NAVLRQAAAVH-----------DRIRITVEDVEVAETETRTQAAVALLVD MMAR_4540|M.marinum_M NAVLRQAGTAPS------GGGAGPIRITVDDVEVSETETRTQAAVALLVD MUL_4710|M.ulcerans_Agy99 NAVLRQAGTAPP------GGAAGPIRITVDDVEVSETETRTQAAVALLVD MAV_1084|M.avium_104 NAVLRQAGTATL------DGPDGRLKITVDDVEVSETETRTQAAVALLVD Mflv_1878|M.gilvum_PYR-GCK NAVLREAGT-------AKDRPGGRLRITVDDVEISETETRTQAAVALLVD Mvan_4853|M.vanbaalenii_PYR-1 NAVLRTAGTNAVLREAGTGETAGPIRITVDDVEISETETRTQAAVALLVD MSMEG_5511|M.smegmatis_MC2_155 NAVLRQAGT---------GLVERPIRFAVDDVEISETETRTQACVALLVD ***** *.: ::::*:***::********.****** Mb0984|M.bovis_AF2122/97 TSFSMVMENRWLPMKRTALALHHLVCTRFRSDALQIIAFGRYARTVTAAE Rv0959|M.tuberculosis_H37Rv TSFSMVMENRWLPMKRTALALHHLVCTRFRSDALQIIAFGRYARTVTAAE MMAR_4540|M.marinum_M TSFSMVMENRWLPMKRTALALNHLVCTRFRSDALQIIAFGRYARTVTAAE MUL_4710|M.ulcerans_Agy99 TSFSMVMENRWLPMKRTALALNHLVCTRFRSDALQIIAFGRYARTVTAAE MAV_1084|M.avium_104 TSFSMVMENRWLPMKQTALALNHLVCTRFRSDALQIIAFGRYARTVTAAE Mflv_1878|M.gilvum_PYR-GCK TSFSMVMENRWLPMKRTALALNHLVSTRFRSDALQIVAFGRYARTVTAAE Mvan_4853|M.vanbaalenii_PYR-1 TSFSMVMENRWLPMKRTALALNHLVSTRFRSDALQIVAFGRYARTVTAAE MSMEG_5511|M.smegmatis_MC2_155 TSFSMVMENRWLPMKRTALALNHLVSTRFRSDALQIIAFGRYARTVSAAE ***************:*****:***.**********:*********:*** Mb0984|M.bovis_AF2122/97 LTGLAGVYEQGTNLHHALALAGRHLRRHAGAQPVVLVVTDGEPTAHLEDF Rv0959|M.tuberculosis_H37Rv LTGLAGVYEQGTNLHHALALAGRHLRRHAGAQPVVLVVTDGEPTAHLEDF MMAR_4540|M.marinum_M LTGLEGVYEQGTNLHHALALAGRHLRRHPNAQPVVLVVTDGEPTAHLEDF MUL_4710|M.ulcerans_Agy99 LTGLEGVYEQGTNLHHALALAGRHLRRHPNAQPVVLVVTDGEPTAHLEDF MAV_1084|M.avium_104 LTGLEGVYEQGTNLHHALALAGRHLRRHPNAQPVVLVVTDGEPTAHLEDF Mflv_1878|M.gilvum_PYR-GCK LTGLEGVYEQGTNLHHALALATRHLRRHPNAQPVILVVTDGEPTAHLEDF Mvan_4853|M.vanbaalenii_PYR-1 LTGLEGVYEQGTNLHHALALATRHLRRHPNAQPVVLVVTDGEPTAHLEDF MSMEG_5511|M.smegmatis_MC2_155 LTALEGVYEQGTNLHHALALASRHLRRHPNAQPVVLVVTDGEPTAHLENF **.* **************** ******..****:*************:* Mb0984|M.bovis_AF2122/97 -DGD--GTSVFFDYPPHPRTIAHTVRGFDDMARLGAQVTIFRLGSDPGLA Rv0959|M.tuberculosis_H37Rv -DGD--GTSVFFDYPPHPRTIAHTVRGFDDMARLGAQVTIFRLGSDPGLA MMAR_4540|M.marinum_M -AGEGAGSTVFFDYPPHPRTIAHTVRGFDDMARLGAQITIFRLGSDRGLA MUL_4710|M.ulcerans_Agy99 -SGEGAGSAVFFDYPPHPRTIAHTVRGFDDMARLDAQITIFRLGSDRGLA MAV_1084|M.avium_104 -EGE--GTTVFFDYPPHPRTIAHTVRGFDEMARLGAQITIFRLGSDPGLA Mflv_1878|M.gilvum_PYR-GCK --DGDGRSSVFFDYPPHPRTIAHTVRGFDEVARLGAQVTIFRLGSDPGLA Mvan_4853|M.vanbaalenii_PYR-1 --DGDGRSAVFFDYPPHPRTIAHTVKGFDEVARMGAQVTIFRLGSDPGLA MSMEG_5511|M.smegmatis_MC2_155 RISEDEGAQVFFDYPPHPRTIAHTVRGFDEVARLGAQVTIFRLGSDPGLA . : ****************:***::**:.**:******** *** Mb0984|M.bovis_AF2122/97 RFIDQVARRVQGRVVVPDLDGLGAAVVGDYLRFRRR- Rv0959|M.tuberculosis_H37Rv RFIDQVARRVQGRVVVPDLDGLGAAVVGDYLRFRRR- MMAR_4540|M.marinum_M RFIDQVARRVEGRVVEPDLDGLGAAVVGDYLRSRRRR MUL_4710|M.ulcerans_Agy99 RFIDQVARRVEGRVVEPDLDGLGAAVVGDYLRSRRRR MAV_1084|M.avium_104 RFIDQVARRVEGRVVVPDLDGLGAAVVGDYLRSRRRR Mflv_1878|M.gilvum_PYR-GCK RFIDQVARRVGGRVVVPDLDGLGAAVVGDYLSAKRRR Mvan_4853|M.vanbaalenii_PYR-1 RFIDQVARRVGGRVVVPDLDGLGAAVVGDYLSAKRRR MSMEG_5511|M.smegmatis_MC2_155 RFIDQVARRVQGRVVVPDLDGLGAAVVGDYLRSRRR- ********** **** *************** :**